Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00661 ATGGCCTCATTTGCTGTGGTATTCTCACACTTTGCAATGCTTTTGCTGTCTGTTTTGCCTTCGGGGAGTTCACTGAGCTTAGACTACTACGAGAAGACATGTCCAGGTGTTGACTTCATCGTTAATAAAGCTGTCAAGAGTGCAGCTTACAAAGACAAGACTGTCCCTGCGGGACTCCTCCGGATGCACTTTCATGACTGTTTTATAAGGGTACTCTCTTCAGAATTCTCAACACGTTTAAACTTCTATGTGTTTGACAAAACTAACCTGGTTTTGTTTGCTTGGGTGAAGGGCTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCTGAGAAAGATGGGCCTCCTAATTTGTCTTTGCACTCGTTTTTCGTGATCGACAACGCAAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCTTGTGCTGATATTGTGGCTCTAGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGTTAGTGAAACAATACAATTGCCATCTCCAAGCTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTATCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAAATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAATGCTGGTGCTTACATGGATACTTCTTCAACCACATTTGACAACAATTATTATAGACTGATACTTCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTTTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGCTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 1038 43.35 MASFAVVFSHFAMLLLSVLPSGSSLSLDYYEKTCPGVDFIVNKAVKSAAYKDKTVPAGLLRMHFHDCFIRVLSSEFSTRLNFYVFDKTNLVLFAWVKGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADIVALAARDAVVLSGGPTWDVPKGRKDGRISKVSETIQLPSPSFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKNAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 345
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 5545692 5547167 + CmaCh03G006610.1 Cma03g00661 290232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00661 345 PANTHER PEROXIDASE 25-RELATED 95 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PANTHER PEROXIDASE 25-RELATED 10 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 Pfam Peroxidase 42 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Cma03g00661 345 Gene3D - 28 345 - -
Cma03g00661 345 ProSiteProfiles Plant heme peroxidase family profile. 24 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 Gene3D Peroxidase, domain 2 187 328 - -
Cma03g00661 345 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PANTHER PEROXIDASE 10 71 - -
Cma03g00661 345 PANTHER PEROXIDASE 95 344 - -
Cma03g00661 345 CDD secretory_peroxidase 25 344 IPR033905 GO:0004601|GO:0042744
Cma03g00661 345 SUPERFAMILY Heme-dependent peroxidases 25 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00661 345 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00661 Cma-Chr3:5545692 Cma18g01214 Cma-Chr18:9599503 1.60E-113 dispersed
Cma12g00394 Cma-Chr12:2033702 Cma03g00661 Cma-Chr3:5545692 3.80E-148 wgd
Cma03g00661 Cma-Chr3:5545692 Cma07g00408 Cma-Chr7:1767659 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00661 K00430 - csv:101217954 569.696