Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma03g00661 | ATGGCCTCATTTGCTGTGGTATTCTCACACTTTGCAATGCTTTTGCTGTCTGTTTTGCCTTCGGGGAGTTCACTGAGCTTAGACTACTACGAGAAGACATGTCCAGGTGTTGACTTCATCGTTAATAAAGCTGTCAAGAGTGCAGCTTACAAAGACAAGACTGTCCCTGCGGGACTCCTCCGGATGCACTTTCATGACTGTTTTATAAGGGTACTCTCTTCAGAATTCTCAACACGTTTAAACTTCTATGTGTTTGACAAAACTAACCTGGTTTTGTTTGCTTGGGTGAAGGGCTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCTGAGAAAGATGGGCCTCCTAATTTGTCTTTGCACTCGTTTTTCGTGATCGACAACGCAAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCTTGTGCTGATATTGTGGCTCTAGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGTTAGTGAAACAATACAATTGCCATCTCCAAGCTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTATCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAAATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAATGCTGGTGCTTACATGGATACTTCTTCAACCACATTTGACAACAATTATTATAGACTGATACTTCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTTTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGCTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA | 1038 | 43.35 | MASFAVVFSHFAMLLLSVLPSGSSLSLDYYEKTCPGVDFIVNKAVKSAAYKDKTVPAGLLRMHFHDCFIRVLSSEFSTRLNFYVFDKTNLVLFAWVKGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADIVALAARDAVVLSGGPTWDVPKGRKDGRISKVSETIQLPSPSFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKNAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5545692 | 5547167 | + | CmaCh03G006610.1 | Cma03g00661 | 290232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma03g00661 | 345 | PANTHER | PEROXIDASE 25-RELATED | 95 | 344 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PANTHER | PEROXIDASE 25-RELATED | 10 | 71 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | Pfam | Peroxidase | 42 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 209 | 219 | IPR019793 | - | |
Cma03g00661 | 345 | Gene3D | - | 28 | 345 | - | - | |
Cma03g00661 | 345 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 345 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | Gene3D | Peroxidase, domain 2 | 187 | 328 | - | - | |
Cma03g00661 | 345 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Haem peroxidase superfamily signature | 209 | 224 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Haem peroxidase superfamily signature | 269 | 284 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PANTHER | PEROXIDASE | 10 | 71 | - | - | |
Cma03g00661 | 345 | PANTHER | PEROXIDASE | 95 | 344 | - | - | |
Cma03g00661 | 345 | CDD | secretory_peroxidase | 25 | 344 | IPR033905 | GO:0004601|GO:0042744 | |
Cma03g00661 | 345 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 345 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 143 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 162 | 177 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 208 | 220 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 267 | 282 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 283 | 300 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma03g00661 | 345 | PRINTS | Plant peroxidase signature | 323 | 336 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00661 | Cma-Chr3:5545692 | Cma18g01214 | Cma-Chr18:9599503 | 1.60E-113 | dispersed | |
Cma12g00394 | Cma-Chr12:2033702 | Cma03g00661 | Cma-Chr3:5545692 | 3.80E-148 | wgd | |
Cma03g00661 | Cma-Chr3:5545692 | Cma07g00408 | Cma-Chr7:1767659 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma03g00661 | K00430 | - | csv:101217954 | 569.696 |