Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00703 ATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTTTGTTTTGTGCTGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAGAATGCACCAGCTTTCTTTTGGTGTGAGATAGATGGGAGTTCTTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCTCAAATGCAAAGCCGATGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGAATGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGTGTTAAAGGGTATTCCAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAG 510 46.08 MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPMEQVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5739510 5740812 + CmaCh03G007030.1 Cma03g00703 290274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00703 169 CDD Bbox1_BBX-like 4 47 - -
Cma03g00703 169 SMART bboxneu5 51 96 IPR000315 GO:0008270
Cma03g00703 169 SMART bboxneu5 4 47 IPR000315 GO:0008270
Cma03g00703 169 Pfam B-box zinc finger 52 85 IPR000315 GO:0008270
Cma03g00703 169 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Cma03g00703 169 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 168 - -
Cma03g00703 169 MobiDBLite consensus disorder prediction 127 145 - -
Cma03g00703 169 Gene3D Classic Zinc Finger 1 94 - -
Cma03g00703 169 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 168 - -
Cma03g00703 169 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Cma03g00703 169 MobiDBLite consensus disorder prediction 108 126 - -
Cma03g00703 169 MobiDBLite consensus disorder prediction 105 169 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00703 Cma07g00442 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00703 Cma-Chr3:5739510 Cma16g00606 Cma-Chr16:3132335 1.58E-71 dispersed
Cma03g00703 Cma-Chr3:5739510 Cma05g00283 Cma-Chr5:1210628 3.11E-23 wgd
Cma03g00703 Cma-Chr3:5739510 Cma07g00442 Cma-Chr7:1941184 8.50E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34634 PF00643 zf-B_box 9.70E-06 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00703 - - csv:101206016 289.271