Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00716 ATGGCCAAGCCTATGAGTTTTGTCGTTGTTTTTTCCCTTCTTGCCTTGGCTCCTCTCTGTTTCTCTAGCAGAAATGGCGGCTTTGGGTCTCTGTACCCGCAATATTATGACCACTCCTGCCCCAATGCTAAGGAAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCTAGAGAAGCTCGTATTGCTGCTTCTATCCTTAGACTTCACTTTCATGACTGTTTTGTTCAGGGGTGTGATGCATCTTTACTACTGGACAGCAGTGGGAGCATTAGAAGCGAGAAGAATTCAAACCCAAATAGGAACTCGGCTAGAGGGTTTGAGGTGATTGATGAGATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCCACTGTCATTACGGGTGGACCCTTTTGGGAGGTTCCATTGGGAAGGAAAGACTCGAGAACTGCGAGCTTGAGTGGCTCCAACAACAACATTCCAGCTCCAAACAACACTTTCCAAACCATTCTCAACAGATTCCAAAACCAGGGCCTTGACATCGTTGATCTTGTCGCCTTATCTGGAGGTCACACCATCGGGAATTCAAGGTGCACCAGCTTCCGGCAGAGGCTATACAACCAGAACGGCAATGGACAGCCCGACAAAACCCTTCCGCAGCCGTACGCGGCTGAGCTTCGGAACCGCTGCCCGAGATCCGGCGGCGACAATAACCTCTTTTTCCTCGACTTCGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATTGTTGGTTTCAAAGGGCTTCTCAACTCCGACCAAGTTCTCCTCACCGGAAACGACGCGTCGGCTGCTTTGGTAAAGAAATATGCCGACAACAGCGAGGTGTTCTTCGAGCAGTTCGCCAAATCCATGATCAAAATGGGCAATATTTCCCCATTGACGGGCTCAAATGGAGAGATCAGAAAGACTTGCAGGAAGATAAACAATTAA 999 48.15 MAKPMSFVVVFSLLALAPLCFSSRNGGFGSLYPQYYDHSCPNAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPFWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGGHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQPYAAELRNRCPRSGGDNNLFFLDFVSPTKFDNSYFKNIVGFKGLLNSDQVLLTGNDASAALVKKYADNSEVFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5790882 5792773 - CmaCh03G007160.1 Cma03g00716 290287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00716 332 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 CDD secretory_peroxidase 31 330 IPR033905 GO:0004601|GO:0042744
Cma03g00716 332 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cma03g00716 332 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cma03g00716 332 Pfam Peroxidase 47 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 PANTHER PEROXIDASE 72-RELATED 5 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00716 332 Gene3D - 35 331 - -
Cma03g00716 332 Gene3D Peroxidase, domain 2 168 311 - -
Cma03g00716 332 PANTHER PEROXIDASE 5 331 - -
Cma03g00716 332 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00716 Cma16g00634 CCT
Cma03g00716 Cma16g00634 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00716 Cma-Chr3:5790882 Cma04g00767 Cma-Chr4:3896086 0 dispersed
Cma04g00815 Cma-Chr4:4177279 Cma03g00716 Cma-Chr3:5790882 1.82E-97 dispersed
Cma04g01562 Cma-Chr4:7939483 Cma03g00716 Cma-Chr3:5790882 6.21E-96 dispersed
Cma18g01072 Cma-Chr18:8867931 Cma03g00716 Cma-Chr3:5790882 1.37E-85 dispersed
Cma16g00634 Cma-Chr16:3271830 Cma03g00716 Cma-Chr3:5790882 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00716 K00430 - csv:101204648 600.512