Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00756 ATGGCGAATATGTGTGCCGATAGCGGCAATCTTATGGCGATTGCTCAGCAAGTCATGAAGCAGAAGCAGCTACAAGAGCAGCAACAGCAGCAGCACCCACAGCAGTCGCCTCAGCAGCTCACTGGACCCTGTACTTTCGGTCTCAACCCATGGACTGCCTCGAACCATTCTCTGTCCGGTGCGCCAGATTTGGGGTTTGGGCTCTCCGGAGCTGGATTTCCCGACCCGTTTCAGGTTCAGAGAGTAGTCGACGGTGGAGATACGAGCTTTCAGTTTCCCAACTTGGAGCACCATTCTTCTGCTTTCAGATTTACCGATTTCGACGGCGGCGCTGCGGCAGAGTTCGACTCCGATGAGTGGATGGACAGTCTAATAGTCGGTGGAGATTCAACGGAGAGCTCTAATCTTCCTTCTGGTTGCGAAGCGTGGCAGTCTAATTCGGATTTTGCTTTCTATGGTGCCGATCCCTTTATCCCCTGTCCCAGTCGCCTCACTATTCCCTGTTCTTCACCCTCTGATCTTAACAGAGTCATTTTCCCTGATCCTCCCAAAAGTCAAACCGCCGTTCAACCGCCGGTGGTCTCGTGGACGGGACTTACGTCGGCGACTCCACCGGCGGTCGTCAAGGACACTCAAGTTCCCAACCCTCCCCTTATTGTTCACAAGAGTGATGATAACGGCGGTTCGTCGAGTTCTGCAAAGACTGAATCGACTCCGCCGCTACTTAAAACCCTAATTGAATGTGCTCGACTCTCCGAATCGGAGCCAGATCGAGCGGCGCAAATGTTGATTCAGCTTAAGGAATCGTCATCGGAGCACGGAGATCCGACGGAGAGAGTCGCCTTTTACTTTCTCGAAGCTCTGTGCCGGAGATTGTCACTTCGATCGGAGAATTGTTTGGTTTCTTGCGAATCCACTTCCGATGATTTCACTCTCTCTTATAAAGCTCTGAACGACGCTTGCCCTTATTCTAAATTCGCACATTTGACGGCGAATCAAGCCATTCTCGAGATTACAGAGAACGCAAGCAGGATTCACATAATCGACTTTGGGATTTCACAGGGAGTTCAATGGGCGGCTCTTCTTCAAGCTCTCGCAACCCGCTCTACCGGAAAACCAACAGGAATTCGGATCTCCGGCATTCCGGCTCCGATGCTCGGGAACTGTCCGGCGACGGCGCTGTTCGCAACAGGTAACCGACTGGCCGAGTTCGCGAAGCTTCTGGAACTAAACTTCGAATTCGACCCAATTCTGACTCCGATCGAAGAACTGAACGAATCGTCGTTCCGAATCGAGTCGGATGAATCCCTGGCCGTGAATTTCATGCTTCAATTATACAACCTCCTCGACGAAACTCCTCGCGCCGTTCTCAACGTTTTGAAACTGGCAAAATCGCTGAACCCTAAAATCGTGACCCTCGGGGAATACGAAGCCAGTCTAAACCGGGTCGGGTTCTTCACCCGGTTCAATAACGCACTCAGATATTACTCTGCCATGTTCGAATCACTGGACCCAAAATTACCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTCGTGCTCGGGCGGCGAATCGGCGGCGTGGTGGGACCGGAGTCGTCGTCGTCGACGGGGGCGGCGGCGGCGGCGGGGGGAGGCAAAACGGAACGAATGGAAGAGAAAGAAGAGTGGAAAATGTTAATGGAAAACAGCGGATTTGAAGCAGTAAATCTGAGCCATTACGCGAGAAGCCAAGCTAAAATCCTTTTATGGAAGTACGATTACAGCTCTGAGTATTGTCTGATGGAATCCTCAGCTGGGTTCCTGTCGTTGGCATGGAAGGATGTCCCGATCATTACAGTTTCTTCATGGCGTTGA 1860 51.94 MANMCADSGNLMAIAQQVMKQKQLQEQQQQQHPQQSPQQLTGPCTFGLNPWTASNHSLSGAPDLGFGLSGAGFPDPFQVQRVVDGGDTSFQFPNLEHHSSAFRFTDFDGGAAAEFDSDEWMDSLIVGGDSTESSNLPSGCEAWQSNSDFAFYGADPFIPCPSRLTIPCSSPSDLNRVIFPDPPKSQTAVQPPVVSWTGLTSATPPAVVKDTQVPNPPLIVHKSDDNGGSSSSAKTESTPPLLKTLIECARLSESEPDRAAQMLIQLKESSSEHGDPTERVAFYFLEALCRRLSLRSENCLVSCESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASRIHIIDFGISQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIESDESLAVNFMLQLYNLLDETPRAVLNVLKLAKSLNPKIVTLGEYEASLNRVGFFTRFNNALRYYSAMFESLDPKLPRDSNERLQLEKLVLGRRIGGVVGPESSSSTGAAAAAGGGKTERMEEKEEWKMLMENSGFEAVNLSHYARSQAKILLWKYDYSSEYCLMESSAGFLSLAWKDVPIITVSSWR 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5947647 5949506 - CmaCh03G007560.1 Cma03g00756 290327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00756 619 MobiDBLite consensus disorder prediction 20 46 - -
Cma03g00756 619 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 242 618 - -
Cma03g00756 619 ProSiteProfiles GRAS family profile. 232 619 IPR005202 -
Cma03g00756 619 MobiDBLite consensus disorder prediction 531 550 - -
Cma03g00756 619 Pfam GRAS domain family 242 619 IPR005202 -
Cma03g00756 619 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 242 618 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00756 Cma16g00656 CCT
Cma03g00756 Cma07g00493 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00756 Cma-Chr3:5947647 Cma04g00784 Cma-Chr4:3996533 0 dispersed
Cma03g00756 Cma-Chr3:5947647 Cma07g00493 Cma-Chr7:2130556 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34640 PF03514 GRAS 9.30E-108 CL0063 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00756 - - cmos:111453531 1151.35