Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00775 ATGGTAAGTCAGGTGACCGCGCCTTTTCAGTCGGCCATGGACGAAGCCCCTATTTGTGCACCCACTTGCAGCGCCTTTGTCGATGAAACCACCGACAATGACCGTGAAGAAATTACGGCGCCTGACTCATCTCCGGGGAACTCAACCCGGACGCTTTACGACCCTCCGCCGTGCTCAAATCGATATAGGAAGAAGAAGAAGAAGAAGAAAAAGGTTATTATTGATAACGCCCAAGAACTGATTTACTCGTCCTCTTCTTGTTCTTCTCCCGCAAGATTGATACACAGAGGTGTCAATTGCAAACGCCGACGCCCCAAGGTTCTACTTGTCCAACCGCGGCGTGTCGATTGTGATTTTGAAAGCGTGGCGCTTTTATTGGGGATGTCATTCGCAGCTTTTGTTTCTCAGGTGTTTGAGAGGCAGGACATGTCTAGTGAAAGGATGTCTGTTGATCATCTCTCAATGATTTGCACTTCAGCTATAAGAGAATCTTTGGTCAATGTTTTTGGGGACAAGCTCGATTGGTTTTTGAAGAAATTTGAGAAGTCGTTTGGCAGCACGTTAAGAACTCTTAGATCAATTAGTGAATCATCTGCTAGAACTGGTGTGAATTTCTCCAGCAAGCGCAAAGAAGAAAACATCACCGTGGATCTGACCCCTGATAGGAAACGGGATGGGACAAGTAGCTCTAGTCTGGAAGAGTCTTCTAGGACAGATGCCCCTGTTGATCAACTAAGTTTAATTGAAGAGGTAAATGAAAGCGTTTCTGATTCATTGGGTCGGGAGTTAGCTTTGTGTAGACTGACAGACGATGTGCCTTCTATTGCCCCACGGCCAGTTGGTTGCCATAGCAATGAGGTATCCGTTGGCACTTTCGAAAGATCTGTTGTCGAACAGGCACGTTCCAACGATCTTAGAACATTGGAGTTTGGCCTTGCATTGAGGAAATTAAAGTTGAAAGAGACACAAATCGCACTCAATTGTGAATTAAACAATCTTGAGAGGTCGAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCAGAGAAGTTCAAGAATCAGTTAGAAGACACGAGACAATCGGAACTGCTTAAGAACTGCAGAGACTGTCTCGTTGCTGGTTTTCTTATAATGTTGGTTGCCCTCTCTTATGGAGCATATGTTTATTCATATCAAAGAATCTCTGAAGCTACTTCAATCTGTACACCAACTCAGGACTCAAAATCTTGGTGGATGCCAAATCCCATGGCATCTTTGAACTCCGGATGGCATATGTTAAGGTGTCAAGTTCAAGTTGTGAGCCGGTTGGCGTTCGGTGGGATCATGATTCTTGCAATAGCTTACTTGCTAATCCAACGCTCAGCTACTTCAAATCAGGCAATGCCAGTTACTTTCATCGTCTTGTTGCTTGGAGTAGCCTGCGGTTTAGCTGGGAAGTTCTGCATAGACACACTGGGAGGAAGCGGATTGCATTGGCTCATGTTTTGGGAGATCATGTGCTCAATGCACTTATGTGCAAATCTTTTTACATCAGCACTGTTTCTGATCTTACAGGGGCCGGTCGAAGTTTCTCAAGGGAAAAATCGTCACTCAATCTTGCCATATTGGATTCGCCGTGCTGTATTCTACGCCCTTCTTCTTGTATTTCTGCCATTGTTGTGTGGACTGATACCATTTGCAGGTGTAGGTGCATGGAAAGATCATTTTTTTCTCCTGAATGAGAAGAAGGTCCATACCGGAGCTGGATTGCCGGTACTGAAGAATTGGGAGCCGCTGCAGAGAGATTTGTTGCTGCTGTCTGAAGAAGTCATGACGGGCAGAGGGCCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAATAATAAGAGGAGGGAGAGGCGTCGGAGGGCCATTGCTGCTAAGATCTACACTGGTCTTAGAGCTCAGGGGAACTATAAGCTTCCTAAACACTGTGACAACAACGAGGTCCTGAAGGCACTCTGTAATGAGGCTGGTTGGGTGGTTGAAGAAGATGGCACCACTTATCGCAAGGGAAGCAAGCCACCTCCGATTGATATTGGCACTTCTGCAAACATGAGTGCCTGTTCCTCTCTTCAACCAAGCCCACAATCTTCCTGCTTCCCGAGTCCTGTACCATCCTACCATGCCAGTCCTTCCTCGTCCTCTTTTCCAAGCCCAACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTTCTTCAAAATATATCCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTCACACCACCTCTCTCTTCCCCGACGTCAAGGGGTTCTAAGCGAAAACCAGACTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCATTCTTTGCTGTATCCGCTCCTTCAAGTCCAACAAGATGCCACCATCTTACACCGGCTACAATCCCCGAATGTGACGAGTCGGACGCTTCAACTGTGGACTCTGGTCGCTGGGTCAGCTTCCAGACTGTGGCACCTTCCGTGGCTCCTCCTTCCCCTACGTTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCATGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACCTCTGATAGGGGACGAGGCTCCGAGTTTGAATTTGAGAAATTTGAGAGTGGCGCAGTGAAGGCGTGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGACGACTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTTATCCTGGTTCGCCTTCTTGCAAAACTCTGAACTCGTTACTACAGCTTGTAGTGGAAGAGCAATCAAAATTTGAGTCAAGGCCCAGGAAAGGACATCATTCGCTACTGGAAAATGAGAAGAACAATGCCATTGTCATGGTTATATATTTTTCCTTCCCTCTCGGAGTGCTTTCAATTTTTTTTCAGGATCGCATGGTCCTTAGAGTAGAGATTGCTCACCTGTATCAGACATTTCTTAACGTGATAGAAACGAACAACCAACTGTGGGGGAAAAATTGCTATGAACATTGCCCATTTTCTTCCTGTGGTAGCCTGGTGGGGTGGTGTCCTTCCCTGTTGTGCTCTGTGGTGCCAGTGGATCTTTGCGTGCTGCTCTTTTTTCGCAGATTGTTTACGTACCGACCAATTAATTCAGCAACTGCCTCTCAGAATGATCAATAA 3207 46.71 MVSQVTAPFQSAMDEAPICAPTCSAFVDETTDNDREEITAPDSSPGNSTRTLYDPPPCSNRYRKKKKKKKKVIIDNAQELIYSSSSCSSPARLIHRGVNCKRRRPKVLLVQPRRVDCDFESVALLLGMSFAAFVSQVFERQDMSSERMSVDHLSMICTSAIRESLVNVFGDKLDWFLKKFEKSFGSTLRTLRSISESSARTGVNFSSKRKEENITVDLTPDRKRDGTSSSSLEESSRTDAPVDQLSLIEEVNESVSDSLGRELALCRLTDDVPSIAPRPVGCHSNEVSVGTFERSVVEQARSNDLRTLEFGLALRKLKLKETQIALNCELNNLERSKLAMGISKASFKAEKFKNQLEDTRQSELLKNCRDCLVAGFLIMLVALSYGAYVYSYQRISEATSICTPTQDSKSWWMPNPMASLNSGWHMLRCQVQVVSRLAFGGIMILAIAYLLIQRSATSNQAMPVTFIVLLLGVACGLAGKFCIDTLGGSGLHWLMFWEIMCSMHLCANLFTSALFLILQGPVEVSQGKNRHSILPYWIRRAVFYALLLVFLPLLCGLIPFAGVGAWKDHFFLLNEKKVHTGAGLPVLKNWEPLQRDLLLLSEEVMTGRGPSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGSKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPFFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDAVDRHGAMGWGATSDRGRGSEFEFEKFESGAVKAWEGERIHEVGVDDLELTLGGGKARYPGSPSCKTLNSLLQLVVEEQSKFESRPRKGHHSLLENEKNNAIVMVIYFSFPLGVLSIFFQDRMVLRVEIAHLYQTFLNVIETNNQLWGKNCYEHCPFSSCGSLVGWCPSLLCSVVPVDLCVLLFFRRLFTYRPINSATASQNDQ 1068
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6022602 6029709 - CmaCh03G007750.1 Cma03g00775 290346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00775 1068 MobiDBLite consensus disorder prediction 675 713 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 214 243 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 214 230 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 759 775 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 606 628 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 40 55 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 759 783 - -
Cma03g00775 1068 PANTHER PROTEIN CPR-5 56 574 IPR044708 GO:0006952|GO:0010090|GO:0010150
Cma03g00775 1068 MobiDBLite consensus disorder prediction 691 713 - -
Cma03g00775 1068 Pfam BES1/BZR1 plant transcription factor, N-terminal 611 733 IPR008540 -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 31 67 - -
Cma03g00775 1068 MobiDBLite consensus disorder prediction 614 628 - -
Cma03g00775 1068 PANTHER PROTEIN CPR-5 56 574 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00775 Cma07g00508 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00775 Cma-Chr3:6022602 Cma12g00489 Cma-Chr12:2541382 8.61E-80 dispersed
Cma07g00509 Cma-Chr7:2200883 Cma03g00775 Cma-Chr3:6022602 0 transposed
Cma03g00775 Cma-Chr3:6022602 Cma05g00226 Cma-Chr5:963953 4.53E-80 wgd
Cma03g00775 Cma-Chr3:6022602 Cma07g00508 Cma-Chr7:2196728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34645 PF05687 BES1_N 1.40E-62 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00775 - - bhj:120074312 848.195