Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma03g00775 | ATGGTAAGTCAGGTGACCGCGCCTTTTCAGTCGGCCATGGACGAAGCCCCTATTTGTGCACCCACTTGCAGCGCCTTTGTCGATGAAACCACCGACAATGACCGTGAAGAAATTACGGCGCCTGACTCATCTCCGGGGAACTCAACCCGGACGCTTTACGACCCTCCGCCGTGCTCAAATCGATATAGGAAGAAGAAGAAGAAGAAGAAAAAGGTTATTATTGATAACGCCCAAGAACTGATTTACTCGTCCTCTTCTTGTTCTTCTCCCGCAAGATTGATACACAGAGGTGTCAATTGCAAACGCCGACGCCCCAAGGTTCTACTTGTCCAACCGCGGCGTGTCGATTGTGATTTTGAAAGCGTGGCGCTTTTATTGGGGATGTCATTCGCAGCTTTTGTTTCTCAGGTGTTTGAGAGGCAGGACATGTCTAGTGAAAGGATGTCTGTTGATCATCTCTCAATGATTTGCACTTCAGCTATAAGAGAATCTTTGGTCAATGTTTTTGGGGACAAGCTCGATTGGTTTTTGAAGAAATTTGAGAAGTCGTTTGGCAGCACGTTAAGAACTCTTAGATCAATTAGTGAATCATCTGCTAGAACTGGTGTGAATTTCTCCAGCAAGCGCAAAGAAGAAAACATCACCGTGGATCTGACCCCTGATAGGAAACGGGATGGGACAAGTAGCTCTAGTCTGGAAGAGTCTTCTAGGACAGATGCCCCTGTTGATCAACTAAGTTTAATTGAAGAGGTAAATGAAAGCGTTTCTGATTCATTGGGTCGGGAGTTAGCTTTGTGTAGACTGACAGACGATGTGCCTTCTATTGCCCCACGGCCAGTTGGTTGCCATAGCAATGAGGTATCCGTTGGCACTTTCGAAAGATCTGTTGTCGAACAGGCACGTTCCAACGATCTTAGAACATTGGAGTTTGGCCTTGCATTGAGGAAATTAAAGTTGAAAGAGACACAAATCGCACTCAATTGTGAATTAAACAATCTTGAGAGGTCGAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCAGAGAAGTTCAAGAATCAGTTAGAAGACACGAGACAATCGGAACTGCTTAAGAACTGCAGAGACTGTCTCGTTGCTGGTTTTCTTATAATGTTGGTTGCCCTCTCTTATGGAGCATATGTTTATTCATATCAAAGAATCTCTGAAGCTACTTCAATCTGTACACCAACTCAGGACTCAAAATCTTGGTGGATGCCAAATCCCATGGCATCTTTGAACTCCGGATGGCATATGTTAAGGTGTCAAGTTCAAGTTGTGAGCCGGTTGGCGTTCGGTGGGATCATGATTCTTGCAATAGCTTACTTGCTAATCCAACGCTCAGCTACTTCAAATCAGGCAATGCCAGTTACTTTCATCGTCTTGTTGCTTGGAGTAGCCTGCGGTTTAGCTGGGAAGTTCTGCATAGACACACTGGGAGGAAGCGGATTGCATTGGCTCATGTTTTGGGAGATCATGTGCTCAATGCACTTATGTGCAAATCTTTTTACATCAGCACTGTTTCTGATCTTACAGGGGCCGGTCGAAGTTTCTCAAGGGAAAAATCGTCACTCAATCTTGCCATATTGGATTCGCCGTGCTGTATTCTACGCCCTTCTTCTTGTATTTCTGCCATTGTTGTGTGGACTGATACCATTTGCAGGTGTAGGTGCATGGAAAGATCATTTTTTTCTCCTGAATGAGAAGAAGGTCCATACCGGAGCTGGATTGCCGGTACTGAAGAATTGGGAGCCGCTGCAGAGAGATTTGTTGCTGCTGTCTGAAGAAGTCATGACGGGCAGAGGGCCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAATAATAAGAGGAGGGAGAGGCGTCGGAGGGCCATTGCTGCTAAGATCTACACTGGTCTTAGAGCTCAGGGGAACTATAAGCTTCCTAAACACTGTGACAACAACGAGGTCCTGAAGGCACTCTGTAATGAGGCTGGTTGGGTGGTTGAAGAAGATGGCACCACTTATCGCAAGGGAAGCAAGCCACCTCCGATTGATATTGGCACTTCTGCAAACATGAGTGCCTGTTCCTCTCTTCAACCAAGCCCACAATCTTCCTGCTTCCCGAGTCCTGTACCATCCTACCATGCCAGTCCTTCCTCGTCCTCTTTTCCAAGCCCAACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTTCTTCAAAATATATCCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTCACACCACCTCTCTCTTCCCCGACGTCAAGGGGTTCTAAGCGAAAACCAGACTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCATTCTTTGCTGTATCCGCTCCTTCAAGTCCAACAAGATGCCACCATCTTACACCGGCTACAATCCCCGAATGTGACGAGTCGGACGCTTCAACTGTGGACTCTGGTCGCTGGGTCAGCTTCCAGACTGTGGCACCTTCCGTGGCTCCTCCTTCCCCTACGTTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCATGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACCTCTGATAGGGGACGAGGCTCCGAGTTTGAATTTGAGAAATTTGAGAGTGGCGCAGTGAAGGCGTGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGACGACTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTTATCCTGGTTCGCCTTCTTGCAAAACTCTGAACTCGTTACTACAGCTTGTAGTGGAAGAGCAATCAAAATTTGAGTCAAGGCCCAGGAAAGGACATCATTCGCTACTGGAAAATGAGAAGAACAATGCCATTGTCATGGTTATATATTTTTCCTTCCCTCTCGGAGTGCTTTCAATTTTTTTTCAGGATCGCATGGTCCTTAGAGTAGAGATTGCTCACCTGTATCAGACATTTCTTAACGTGATAGAAACGAACAACCAACTGTGGGGGAAAAATTGCTATGAACATTGCCCATTTTCTTCCTGTGGTAGCCTGGTGGGGTGGTGTCCTTCCCTGTTGTGCTCTGTGGTGCCAGTGGATCTTTGCGTGCTGCTCTTTTTTCGCAGATTGTTTACGTACCGACCAATTAATTCAGCAACTGCCTCTCAGAATGATCAATAA | 3207 | 46.71 | MVSQVTAPFQSAMDEAPICAPTCSAFVDETTDNDREEITAPDSSPGNSTRTLYDPPPCSNRYRKKKKKKKKVIIDNAQELIYSSSSCSSPARLIHRGVNCKRRRPKVLLVQPRRVDCDFESVALLLGMSFAAFVSQVFERQDMSSERMSVDHLSMICTSAIRESLVNVFGDKLDWFLKKFEKSFGSTLRTLRSISESSARTGVNFSSKRKEENITVDLTPDRKRDGTSSSSLEESSRTDAPVDQLSLIEEVNESVSDSLGRELALCRLTDDVPSIAPRPVGCHSNEVSVGTFERSVVEQARSNDLRTLEFGLALRKLKLKETQIALNCELNNLERSKLAMGISKASFKAEKFKNQLEDTRQSELLKNCRDCLVAGFLIMLVALSYGAYVYSYQRISEATSICTPTQDSKSWWMPNPMASLNSGWHMLRCQVQVVSRLAFGGIMILAIAYLLIQRSATSNQAMPVTFIVLLLGVACGLAGKFCIDTLGGSGLHWLMFWEIMCSMHLCANLFTSALFLILQGPVEVSQGKNRHSILPYWIRRAVFYALLLVFLPLLCGLIPFAGVGAWKDHFFLLNEKKVHTGAGLPVLKNWEPLQRDLLLLSEEVMTGRGPSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGSKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPFFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDAVDRHGAMGWGATSDRGRGSEFEFEKFESGAVKAWEGERIHEVGVDDLELTLGGGKARYPGSPSCKTLNSLLQLVVEEQSKFESRPRKGHHSLLENEKNNAIVMVIYFSFPLGVLSIFFQDRMVLRVEIAHLYQTFLNVIETNNQLWGKNCYEHCPFSSCGSLVGWCPSLLCSVVPVDLCVLLFFRRLFTYRPINSATASQNDQ | 1068 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 6022602 | 6029709 | - | CmaCh03G007750.1 | Cma03g00775 | 290346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 675 | 713 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 214 | 243 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 214 | 230 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 759 | 775 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 606 | 628 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 40 | 55 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 759 | 783 | - | - | |
Cma03g00775 | 1068 | PANTHER | PROTEIN CPR-5 | 56 | 574 | IPR044708 | GO:0006952|GO:0010090|GO:0010150 | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 691 | 713 | - | - | |
Cma03g00775 | 1068 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 611 | 733 | IPR008540 | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 31 | 67 | - | - | |
Cma03g00775 | 1068 | MobiDBLite | consensus disorder prediction | 614 | 628 | - | - | |
Cma03g00775 | 1068 | PANTHER | PROTEIN CPR-5 | 56 | 574 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00775 | Cma07g00508 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00775 | Cma-Chr3:6022602 | Cma12g00489 | Cma-Chr12:2541382 | 8.61E-80 | dispersed | |
Cma07g00509 | Cma-Chr7:2200883 | Cma03g00775 | Cma-Chr3:6022602 | 0 | transposed | |
Cma03g00775 | Cma-Chr3:6022602 | Cma05g00226 | Cma-Chr5:963953 | 4.53E-80 | wgd | |
Cma03g00775 | Cma-Chr3:6022602 | Cma07g00508 | Cma-Chr7:2196728 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
34645 | PF05687 | BES1_N | 1.40E-62 | No_clan | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma03g00775 | - | - | bhj:120074312 | 848.195 |