Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00934 ATGGGTCGCTTCAACCTCCTCATTGCACTCTCTCTTCTTTCTTTGTTCGTCTTCCCTTCTCCAACCCTCGCCCAACTCCGAAAAAACTTCTACGCCAATATCTGCCCCAATGTCGAGAACATTGTCCGCTCCCAAGTTACCAAGAAATTTCAACAGACTTTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTGATTATTGCTTCCACTCCATCCAACAAGGCTGAGAAGGATCATCCCGACAACCTCTCGCTTGCCGGAGATGGATTTGACACCGTCATTAAGGCTAAAGCCGCCCTGGATGCCATCCCTCAATGTCGAAACAGAGTCTCCTGTGCCGATATTCTTGCTTTGGCCACTCGTGACGTCATCGCATTGTCCGGCGGACCGTCGTACGCGGTGGAACTGGGAAGGTTAGACGGCCTGGTTTCTAGAGCCTCCGACGTGAACGGGAGACTGCCAGCACCGACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTAAGAATGGGCTGACACAAGAGGACATGATCGCTCTCTCAGCGGCACACACCGTCGGATTCTCACACTGCGGGAAGTTCTCGAACCGAATTTACAGCTTTGCCCCTGGAAAGCCAGTGGACCCTTCATTAAACAGAACATATGCAAACCAGCTACAACAGATGTGCCCGAAGAGTGTGGACCCCAGAGTGGCGATTAACATGGACCCAATCACGCCCAGAGCATTTGACAACATATACTTCAAAAATCTGCAGCAGGGAATGGGCCTATTCACCTCGGACCAGGTTTTGTTCACCGACTCCAGGTCCAGGCCCACAGTGAATTCCTGGGCCAGCAACTCCCAGGCCTTTAATAAAGCCTTTGTTGCAGCCATGACCAAGTTGGGCCGGGTCGGCGTAAAGACCGGTAGAAACGGTAACATCCGGCGTGATTGCGGAGCCTTCAATTAA 987 51.67 MGRFNLLIALSLLSLFVFPSPTLAQLRKNFYANICPNVENIVRSQVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAKNGLTQEDMIALSAAHTVGFSHCGKFSNRIYSFAPGKPVDPSLNRTYANQLQQMCPKSVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDSRSRPTVNSWASNSQAFNKAFVAAMTKLGRVGVKTGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6685302 6687179 - CmaCh03G009340.1 Cma03g00934 290505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00934 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601|GO:0042744
Cma03g00934 328 Gene3D - 29 328 - -
Cma03g00934 328 PANTHER - 7 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PANTHER PEROXIDASE 7 328 - -
Cma03g00934 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cma03g00934 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cma03g00934 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma03g00934 328 Gene3D Peroxidase, domain 2 166 307 - -
Cma03g00934 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00934 Cma07g00660 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00934 Cma-Chr3:6685302 Cma07g01087 Cma-Chr7:5845558 0 dispersed
Cma04g02975 Cma-Chr4:19523308 Cma03g00934 Cma-Chr3:6685302 1.10E-48 dispersed
Cma01g01568 Cma-Chr1:10860732 Cma03g00934 Cma-Chr3:6685302 2.63E-148 transposed
Cma03g00934 Cma-Chr3:6685302 Cma07g00660 Cma-Chr7:2885001 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00934 K00430 - csv:101206860 601.668