Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00941 ATGGAGAAGCCGGTTAGGATTTTTCTACTTTTCTGTTTCTTCTCTGGGCCGTTCATGGCTGCTGCTGCTGCTGCACAGAAGAAGACTTACGTCGTGCACATGGCCAAGTACCAAATGCCCCTGACTTTTGAGCACCACTTGCACTGGTACGACGCGTCGCTCAAATCGGTGTCCGACACGGCCGATATGATCTATGCGTACAAAACCGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGAGGAAGCTAAGCGACTGGAGGCCCAACCTGGGGTTCTGGCTGTGGTGCCGGAGATGAGATATGAACTTCATACCACTCGTACTCCTCAGTTTCTTGGACTCGACAAGAATGCAGATCTGTACCCTGAATCAACCTCCACATCGGAGGTTATCATCGGAGTTTTAGATACTGGGGTTTGGCCGGAGAGTAAGAGCTTCGACGATACTGGGCTGGGACCGGTGCCGAGTAGCTGGAAAGGAGAGTGTGAATCAGGTACCAATTTCAGTGCGTCGAACTGCAACAGGAAGCTGATTGGAGCCAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGACGAATCGAAAGAATCGAGATCTCCGAGAGATGATGACGGACATGGAACCCACACCGCTACCACCGCCGCTGGTTCTGTGGTTGAAAACGCGAGCCTATTTGGCTACGCGTCCGGCACCGCCCGTGGGATGGCCGCACGTGCGAGGGTTGCCGCCTACAAGGTCTGCTGGGCCGGCGGATGTTTCAGCTCCGATATCTTAGCCGCCATTGAAAAGGCTGTGGAGGACAATGTTAATGTCCTTTCCATGTCGCTCGGCGGCGGAATATCTGACTATTACAAAGACAGCGTCGCCTCGGGAGCTTTTGCCGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCTGGGAATGCCGGCCCCAGCCCTTACAGCTTGTCAAATACGTCTCCATGGATAACAACCGTCGGCGCTGGAACATTAGATCGCGATTTCCCGGCGTACGTCAGTATCGGCGACGGCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGCCATTGTCGGGAACGTTGTTGCCTTTTATTTACGCTGCTAATGCGAGTAACTCTGCCAATGGAAATTTGTGTATGACCGGTACTTTGATCCCCGAAAAAGTGGCCGGAAAGGTCGTGTTCTGTGACCGGGGGGTAAACCCTAGGGTTCAGAAAGGGGCGGTGGTTAAAGCCGCTGGTGGAATCGGAATGGTGTTGGCCAATACCGCCGCGAATGGAGAAGAGCTGGTGGCCGACTCTCATCTTCTACCCGCCTCGGCGGTGGGTCAGAAATCCGGTGACATTATACGGAAGTATCTCATTTCGGATCCAAAGCCGACAGTGACGATCTTATTCGAAGGGACGAAATTGGGGATCGAACCGTCTCCGGTGGTGGCAGCGTTTAGCTCCCGAGGACCAAATTCTATCACTCCTCAGGTGCTGAAGCCCGACATAATCGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAAGCAGTGGGACCGAGTGGTTTAGCCATTGATGAAAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCGGCTCTAATCAAGGGCGCTCATCTCGACTGGAGTCCAGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCTTACAAAAACGGCCAAAAGATCCAAGACATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGTGCCGGACACGTCGATCCCGTATCAGCTCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTGGACTTCCTCTGCGCACTCAACTACACTTCGTCGCAGATCAACTCCCTGGCGAGGAGAGATTACACTTGCGACTCGGGGAAGAAGTACAGTGTCAACAATCTCAACTACCCTTCATTCGCCGTCGTTTTCGACGGTGTATTGGGCGGCGGAAGCAGTGGTTCCAGTGTAGTGAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACTTACAAAGTCTCAATCTCGTCGGAGACCAAGCTGGTGAAAATCTCCGTCGAGCCGGAATCATTGAGCTTCACCAAAGCCAATGAGAAGAAGTCATACACAGTCACATTCACAACCGCGACTGGTTCATCTGTACCGCCGAGCGCTGAAGGGTTCGGTCGAATTGAGTGGACGGACGGGAAGCACGTGGTGGGAAGTCCGATTGCGTTTAGTTGGACGTAG 2295 53.46 MEKPVRIFLLFCFFSGPFMAAAAAAQKKTYVVHMAKYQMPLTFEHHLHWYDASLKSVSDTADMIYAYKTVVHGFSTRLTAEEAKRLEAQPGVLAVVPEMRYELHTTRTPQFLGLDKNADLYPESTSTSEVIIGVLDTGVWPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGISDYYKDSVASGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSIGDGKNFSGVSLYRGKPLSGTLLPFIYAANASNSANGNLCMTGTLIPEKVAGKVVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPASAVGQKSGDIIRKYLISDPKPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQVLKPDIIAPGVNILAGWSKAVGPSGLAIDERRVDFNIISGTSMSCPHVSGLAALIKGAHLDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLDFLCALNYTSSQINSLARRDYTCDSGKKYSVNNLNYPSFAVVFDGVLGGGSSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTKANEKKSYTVTFTTATGSSVPPSAEGFGRIEWTDGKHVVGSPIAFSWT 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6733609 6735903 + CmaCh03G009410.1 Cma03g00941 290512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00941 764 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cma03g00941 764 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cma03g00941 764 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Cma03g00941 764 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Cma03g00941 764 CDD Peptidases_S8_3 101 573 IPR034197 -
Cma03g00941 764 Pfam Fibronectin type-III domain 654 760 IPR041469 -
Cma03g00941 764 MobiDBLite consensus disorder prediction 193 216 - -
Cma03g00941 764 MobiDBLite consensus disorder prediction 193 211 - -
Cma03g00941 764 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 18 762 - -
Cma03g00941 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 104 IPR037045 -
Cma03g00941 764 Pfam PA domain 380 453 IPR003137 -
Cma03g00941 764 SUPERFAMILY Subtilisin-like 103 611 IPR036852 GO:0004252|GO:0006508
Cma03g00941 764 CDD PA_subtilisin_like 341 468 - -
Cma03g00941 764 Gene3D Peptidase S8/S53 domain 130 620 IPR036852 GO:0004252|GO:0006508
Cma03g00941 764 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Cma03g00941 764 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Cma03g00941 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Cma03g00941 764 Gene3D - 624 763 - -
Cma03g00941 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 762 IPR045051 -
Cma03g00941 764 Gene3D - 335 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00941 Cma-Chr3:6733609 Cma10g00769 Cma-Chr10:3535963 0 dispersed
Cma12g00589 Cma-Chr12:3069290 Cma03g00941 Cma-Chr3:6733609 0 wgd
Cma03g00941 Cma-Chr3:6733609 Cma05g00150 Cma-Chr5:661618 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00941 - - csv:101209691 1309.28