Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00964 ATGATTCCCAACCCACCCACATTCCTCCCAACCTTTCCACTTCTCTGTTGTGTTGTGCTGTGTTCTCTCTCCGCCTTTTCCGCCTCAGGATTTGCCTTTCAAATTCCGTCGCCTGCGCTTGTCCCACCGGAAGAATTACGGTTGCCTTCCGACGCCGTTTCTCTTTTGTCCTTCAAGTCCAAAGCCGACTTGGACAACAAGCTTCTATACACTCTCAATGAGCGCTTTGATTACTGTCAATGGCAGGGCGTGAAGTGCGTCCAGGGTCGTGTTGTTAGACTGGTTCTTCAATCGTTTGGTCTCCGAGGGACATTGGCTCCAAATACAGTGTCTCAGCTCGACCAGATTCGGATCCTCAGCCTGCATAACAACTCCCTCGAGGGGCCCATTCCTGACCTATCCGGACTCTTCAACCTTAAATCTCTCTTCCTCGGCCGAAACTCCTTTGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACCCTCGATCTTTCCTATAACAACTTCACGGGTCCGCTTCCGGTGAGGCTTTCCTCCTTGGACCGGCTCATTTCTCTCCGGCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCATTAAACCAGTCCTTCCTTGAGGTCTTCAATGTCGCGGGGAATAACCTGTCCGGGCAAATTCCAGTTACCCCCACACTGTCGCGTTTCAACACGTCGTCGTTTTTCTGGAACCCAGATCTCTGCGGTGAGATCGTCAACAAGGCATGCCATTCACGCGCTCCATTCTTTAAAGCTTCCAATGCTACTCCACCACCTCTCCCTTCCGTCCAAAGCGCACAGTCACAGGACATACTTCTCTCTCCGGTCTCTCATGTTAAGCACAAGGAAACCGGTCTGATTGTGGGACTTTCAGTCGGCGCCGCAGTTTTAATAGCAGGTCTTTTATGTTTCTATGTAGCTGCCAGAACCCAAAGAAAAACCGCGTCGAAGCCGGAAATTCCGCCATTCGAAACCGACACTGCGTTTTCCACAGCTTCCGCAATCAACGGCCGAGGCGACGGAAAGGGCGAACTTCAAGTCAAAATGAAAGAAATTGAAGATATACCTAAAGTCCAGAAGAGTGGTAGTCTTATATTTTGTGAAGGGGAGGCAGAGTTGTTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTGCTCGGTAGAGGCACAATGGGAACTACATACAAAGCAGTACTCTGCAACCAGCTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCGCGACGAGTAGCGAAGTTTTCGACCGGCATTTGGAAGCCGTAGGTGCGCTTCGTCACCCCAATTTGGTTCCAGTTAGAGCCTATTTCCAAGCCAGGGGAGAGAGATTAGTGGTCTACGATTACCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTAAAGATTGCAGAAGATTTAGCTCAGGGAATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTAAAGTCTACTAATGTTCTCCTTGGAGCAGAGTTTGAGGCCTGTCTCACAGACTATGGGCTTTCTGCTCTGGCTTTGTGTTGTGAAGATCCTGATGGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCCAGCCGGAATACTACCCACAAGAGCGATGTGTATGCCTTCGGCGTGCTCTTGCTGGAGCTTTTGACAGGAAGACATCCAGCACAGCATCCATTTCTTGAGCCAACTGATATGTTAGAATGGGTAAGGATAGTTAGGGAGGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGTAGTACTACATCCCCTGAACAGAGGCCGGCCATGTGGCAAGTTTTGAAAATGATTCTAGAAATCAAGGAGAGTGTCATGACAGAGGACAGTGAATCTAGTGGCTTTTGA 1986 49.19 MIPNPPTFLPTFPLLCCVVLCSLSAFSASGFAFQIPSPALVPPEELRLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGTLAPNTVSQLDQIRILSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLISLRLEWNGFNGSIPPLNQSFLEVFNVAGNNLSGQIPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSRAPFFKASNATPPPLPSVQSAQSQDILLSPVSHVKHKETGLIVGLSVGAAVLIAGLLCFYVAARTQRKTASKPEIPPFETDTAFSTASAINGRGDGKGELQVKMKEIEDIPKVQKSGSLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAATSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGAEFEACLTDYGLSALALCCEDPDGSRYQAPETRKSSRNTTHKSDVYAFGVLLLELLTGRHPAQHPFLEPTDMLEWVRIVREDDGGDSNQLGMLTEVASICSTTSPEQRPAMWQVLKMILEIKESVMTEDSESSGF 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6841292 6844021 + CmaCh03G009640.1 Cma03g00964 290535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00964 661 Gene3D Ribonuclease Inhibitor 207 252 IPR032675 -
Cma03g00964 661 Gene3D Phosphorylase Kinase; domain 1 358 467 - -
Cma03g00964 661 ProSiteProfiles Protein kinase domain profile. 390 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma03g00964 661 SUPERFAMILY Protein kinase-like (PK-like) 394 648 IPR011009 -
Cma03g00964 661 SUPERFAMILY L domain-like 51 245 - -
Cma03g00964 661 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 30 657 - -
Cma03g00964 661 Gene3D Ribonuclease Inhibitor 49 206 IPR032675 -
Cma03g00964 661 Gene3D Transferase(Phosphotransferase) domain 1 469 659 - -
Cma03g00964 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 657 - -
Cma03g00964 661 Pfam Protein tyrosine and serine/threonine kinase 394 642 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00964 Cma07g00691 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00964 Cma-Chr3:6841292 Cma04g00034 Cma-Chr4:196467 6.16E-154 dispersed
Cma03g00964 Cma-Chr3:6841292 Cma07g00691 Cma-Chr7:3037128 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68428 PF07714 PK_Tyr_Ser-Thr 1.20E-29 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00964 - - bhj:120074099 1132.86