Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01099 ATGTCCACACAGAAGCATAGCTTGAGTCTTGTCGTTGAGGTCCTTAAGAATTTACCAGGGATCATTGCAGGAATATCTAAGTGGAAGCTGAATTTGAAGGGCAAGTTGCAGAGACCTACGCAGCAAGCAATGGCGACCATGAATTCCAGTGTTCTGGCCTGCAACTACGCCATATTAGGCGCGGGATCGGCCGACCTGAGCTCTAAAATCAACGCCGCCCCTTCTGTTGCATCTCCTGGGGTTGTGGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGACGGAAGGAGGTCTGCGCTTCTTTACCTTGGTGCCACCCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCTGCTAATGCTGGAGTCATTGATGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCCACAAGTGGGGCAAACTTTGCAAGGGCATACACCGTTCAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 642 48.29 MSTQKHSLSLVVEVLKNLPGIIAGISKWKLNLKGKLQRPTQQAMATMNSSVLACNYAILGAGSADLSSKINAAPSVASPGVVGYKLPAIRAQQARVPEAKNDGRRSALLYLGATLFAAAAAASNSANAGVIDEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7522637 7525254 - CmaCh03G010990.1 Cma03g01099 290670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01099 213 Gene3D - 129 213 IPR044907 -
Cma03g01099 213 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 44 213 - -
Cma03g01099 213 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 87 213 IPR008796 GO:0009522|GO:0015979
Cma03g01099 213 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 44 213 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01099 Cma-Chr3:7522637 Cma07g00806 Cma-Chr7:3691354 3.64E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01099 K02701 - csv:101204396 293.893