Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01120 ATGGGGGTTCCACAGACGATGGAAATTCTGAGCGCGAGAGCCGCACTTGTGAGAGAGTCGCTGCAGAAGAGCCAGAATGTCACAGAGAACATGGTCTCCATTCTTGGCTCCTTTGACTACCGTCTCTCCGCCCTTGAAACTGCAATGCGGCCTACTCAGATAAGAACTCATTCAATCCGGATGGCACATGAAAATATTGACAAGACATTGAAGGCTGCGGAAAGTATGCTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAAATGTACTTGGAAGCAATTAGTCAGCTACGGAGCACCAATCGCTACTTTACTAGTAACAAAAATTTCAAAAGGAACGAAGCTATTCTTACCCATACAAGCAACTTGCTTGTCAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCCGAACGTCTATTCGACTGCCTCCCCAACTCGTTGCGTCCATCGTCAGCATCTAGGCAAGGTGATAGTGGTAGCAAAAATAGTTCTGATCATCACAACAAAAGCTTAGAAGCTTCCGTCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTAGCTGGCCATCAGCAGCAACTGTTTAGAATATACAGGGATATTCGTGGTGCAGTCTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTAGCAAGGATGATGTCCAAAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTTAAATTGCTGTTTGCTGGGGAAAGGAAAATATGTGATCAAATATTCGAAGGTGCAGATGCTCTCCAGGACCAATGCTTCGCAGATGTGACTACAAGTAGCGTGTCAGTGCTACTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTTTGAAATAATGCGAGAACTGCAACCTGAGATTGAAACACTATTTGGAAGTAAAGCATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACTATGCGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAGAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAATTACGTCAAGTTTTTATTCGACTACAAATCTACTTTGAAGCAATTATTCCAAGGTTTTGAAGCTAGCGATCCAGATGCTCAGTTAGGAGTGGTAACTAAAAGAATTGTGCAGGCCCTTCAGACTAACCTTGATGGGAAATCTAAGCAATATAGGGATCCTGCACTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTACAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTTCAGGCCTCAGGTAGTGGTGGTGCATCGGCAGATGCTGGCGGTGGACTTTCAAGAGCTATGGTGAGAGATAGGTTCAAGACTTTTTACATTCAATTTGAAGAGCTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCCTACCGATCTTTCATCAACCGTTACGGGCAGATTGAGAATGGAAAAGCTTCTCAAAGATACATCAGATATTCACCGGAGGATCTTGAGCGTATGCTAAATGAATTTTTTGAGGGTAAGACATTCAGTGAACAAAAGCGCTAG 1911 43.59 MGVPQTMEILSARAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRMAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAISQLRSTNRYFTSNKNFKRNEAILTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPERLFDCLPNSLRPSSASRQGDSGSKNSSDHHNKSLEASVFIPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRDIRGAVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFEGADALQDQCFADVTTSSVSVLLSFGEAIAKSKRSPEKLFVLLDMFEIMRELQPEIETLFGSKACIEMRDSALSLTMRLAETAQETFVDFEEAVERDATKTAVLDGTVHPLTSYVINYVKFLFDYKSTLKQLFQGFEASDPDAQLGVVTKRIVQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASADAGGGLSRAMVRDRFKTFYIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFINRYGQIENGKASQRYIRYSPEDLERMLNEFFEGKTFSEQKR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7621957 7629447 + CmaCh03G011200.1 Cma03g01120 290691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01120 636 Gene3D Exocyst complex component Exo70 75 636 - -
Cma03g01120 636 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 633 - -
Cma03g01120 636 SUPERFAMILY Cullin repeat-like 76 627 IPR016159 -
Cma03g01120 636 MobiDBLite consensus disorder prediction 168 190 - -
Cma03g01120 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 633 IPR004140 GO:0000145|GO:0006887
Cma03g01120 636 Pfam Exo70 exocyst complex subunit 272 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01120 Cma-Chr3:7621957 Cma04g01443 Cma-Chr4:7345848 0 dispersed
Cma03g01120 Cma-Chr3:7621957 Cma07g00826 Cma-Chr7:3822878 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01120 K07195 - csv:105436019 1116.68