Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01297 ATGCTTTTTACTTTGAAATCTTCTCTAGTTTTTGGGCCTCGATTCGGTATGAATTATCGAACGAAAAGAACGCTTTGCGCTTTCGTCGTCTTTCGTAAGATTTCTCAGAAAGCACAGAAGAAAAGAGAAATGGTGAGCCTGGAACGGACTCCCACATGGGCAGTGGCGACAGTGTGTTTTTTGCTGATTCTGATATCCATTTGCACAGAGTATTTGCTTCATTTCCTTGTGAAACGGTTTTTGAGCATGAAGAGGAGAAAATCACTAAGGCGGGCTCTGGACAATATCAAATCGGAGTTGATGCTTTTGGGATTCGTATCGCTGTTATTGACGGTGAGCGAGAAAGCAATTGCTAACATTTGCATCCCTAAGAGTTCGAATAAAATATTTCTACCCTGCCCGACTACGAATTCGGCCACTTACTTCGTGGAAGAACCCAAGTGTGATTCACAGGCCAAAGCCTCGTTAATATCTAGAGACGGTGCAAAGCAAGTCAAGTATTTGATCATCTGTTTAGCCTTTGTTCACATCTTTTCCAGTCTCCTCACCTACAGTCTTGGAATCGCCAAGATGAGGAGATGGCAGTACTGGGAAGCAAAAACCAGAACGTTGGAGTATCAATTTACAACCGATCCAAGAAGATTTCAATTTGCTCGTCAAACATCCTTTGGAAGGAGGCATCTAAAATTCTGGAGCGACCATCACATTCTTCGATGGCCGGCCTGTTTTCTTAGACAATTTTATGAATCTGTCTCCGCAGCCGATTATCTCACTCTTAGACATGGTTTCATTGCGGCCCATCTTGGGGAAGGGACCAACTTTGATTTCCAAAACTATATTACAAGAGCTCTAGATAATGACTTCAGCGTTGTTGTGGGGATCAGTTGGTGGGTTTGGATTTTTTCTGTTATCTTCATATTCTTCAGTGCACATGGGTTTCACAGCCATCTATGGCTTCCCTTTATTCCATTATTAATGCTTTTGTTGGTTGGGACAAAGCTACAAGGCATCATGACTGAGATGTGCTTGGACAGCCATGGGAAGTCCCATGTCGTCCGAGGAACTGTGCTCGTTAGGCCCAGTGACCAATATTTTTGGTTGGGCCGGCCTAAGTTGCTTCTGTATTTCATACACTTCATTTTCTTCCAGAATTCTTTTCAATTAGCATTCTTTGCATGGGCATGGCTGAAATTTGGGATGAGATCGTGCTTTCATAGAGAGATTTCAGATTGGGTAATAGGAGTTGCGGTGGGTGTGCTGGTGCAGTTCATTTGTGGCTATGTCACTCTGCCTCTCTATGCTCTGGTGGCTCAGATGGGGAGCTCGATGAAGAAAACGGTGTTCACGGAGGGGGTAGTTGAAGGGCTGAGGAAATGGAAAGGGAGAGCGAAGAAAAGGGTAGCTCGAAGAAGGCAAAGAGGGCGCCATGGGTGCGACTGCAACTTCCCGCATTCGTCGCCGCGTGCATCAGTTGACGCGGGGGTTGACTCGCCACCTTCTTTCAGACTTGAGGCAGCGGCAATGGGAATGGCATCTGTGGATTGTGGTCGTTTACAAGGGGCGGGTGGGAACAATAAACATTATAATACTTGTTCGGATTCTGCTGCTCTTTCAAGTTGTGATGATGATGATAAGCTAAAAGGCAAACGACCAGTTGACGAGCCGGATCACAAGGCCAGCTCCTTTGATGGCTTTGACTGGGCTACCAAAATACACCGCAATTTTTCACGACATGCAATGTAG 1743 45.44 MLFTLKSSLVFGPRFGMNYRTKRTLCAFVVFRKISQKAQKKREMVSLERTPTWAVATVCFLLILISICTEYLLHFLVKRFLSMKRRKSLRRALDNIKSELMLLGFVSLLLTVSEKAIANICIPKSSNKIFLPCPTTNSATYFVEEPKCDSQAKASLISRDGAKQVKYLIICLAFVHIFSSLLTYSLGIAKMRRWQYWEAKTRTLEYQFTTDPRRFQFARQTSFGRRHLKFWSDHHILRWPACFLRQFYESVSAADYLTLRHGFIAAHLGEGTNFDFQNYITRALDNDFSVVVGISWWVWIFSVIFIFFSAHGFHSHLWLPFIPLLMLLLVGTKLQGIMTEMCLDSHGKSHVVRGTVLVRPSDQYFWLGRPKLLLYFIHFIFFQNSFQLAFFAWAWLKFGMRSCFHREISDWVIGVAVGVLVQFICGYVTLPLYALVAQMGSSMKKTVFTEGVVEGLRKWKGRAKKRVARRRQRGRHGCDCNFPHSSPRASVDAGVDSPPSFRLEAAAMGMASVDCGRLQGAGGNNKHYNTCSDSAALSSCDDDDKLKGKRPVDEPDHKASSFDGFDWATKIHRNFSRHAM 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8411062 8415352 - CmaCh03G012970.1 Cma03g01297 290868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01297 580 PANTHER MLO-LIKE PROTEIN 1 44 494 IPR004326 GO:0006952|GO:0016021
Cma03g01297 580 Pfam Mlo family 145 476 IPR004326 GO:0006952|GO:0016021
Cma03g01297 580 Pfam Mlo family 46 139 IPR004326 GO:0006952|GO:0016021
Cma03g01297 580 PANTHER MLO-LIKE PROTEIN 44 494 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01297 Cma07g00379 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00197 Cma-Chr2:879793 Cma03g01297 Cma-Chr3:8411062 1.03E-152 dispersed
Cma03g01297 Cma-Chr3:8411062 Cma20g00477 Cma-Chr20:2307515 1.97E-149 dispersed
Cma03g01297 Cma-Chr3:8411062 Cma02g00883 Cma-Chr2:5245432 4.50E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01297 K08472 - csv:101222375 861.677