Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01300 ATGATTATAACACACAGAACCATGTGGATCATTACTCTCCCGAGCTGGATTGGGTATTGGACTGAAGAGCATCCGCTTTTCGATCACTCCCTTCAACGCGAATATTTCACTTCCTTCTTTTCTCTTCTTCCACCCGGTGTCCCTGCACTTTCTTGCTCCATATTGTGGCAGCTTGAAGCCCTGTTCATAACTAGGGCTTGCGACTCACCTGCTCCCAACTTTGCTGCCACTTCCCCGGGTCTAGAAGAAAAGTTAAAGAGTTCTGCAATGGGAAAACATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAACATATTTGTAGATTTGCAGTATGCAAGGAAGGAGAGCCGCACGGTTGATGTGTCAGTTCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAATCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTTTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCTGAACCTAATGAGCAAAATTTGCAGGTTGGAGATGCTATGGCACATCAAGAGATGAACATTGGGATACAAGCATGGAGTTATTGA 678 46.02 MIITHRTMWIITLPSWIGYWTEEHPLFDHSLQREYFTSFFSLLPPGVPALSCSILWQLEALFITRACDSPAPNFAATSPGLEEKLKSSAMGKHSKTSCKSASHKLFKDKAKNRVDDLQNIFVDLQYARKESRTVDVSVLEEQVHQMLREWKSELNEPSPASSLQQGGSFGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDAMAHQEMNIGIQAWSY 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8428355 8430954 + CmaCh03G013000.1 Cma03g01300 290871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01300 225 PANTHER TRANSCRIPTION FACTOR VOZ1 90 212 IPR039277 GO:0006355|GO:0048578
Cma03g01300 225 PANTHER BNAC03G58740D PROTEIN 90 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01300 Cma-Chr3:8428355 Cma07g00212 Cma-Chr7:978085 1.09E-81 dispersed
Cma20g00581 Cma-Chr20:2770379 Cma03g01300 Cma-Chr3:8428355 5.48E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01300 - - csv:101219536 233.802