Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma03g01392 | ATGAATTCGCTTCTGGCTTTTCTTTCGCCACTGCTTCCGTTCGTGGCCTCTCTTGTGTTTCTGCTCCTCTTTCTCGAGCAGATCTCTTATTTGAAGAAGAAGCGCTCTGTTCCTGGTCCTCCTCTCGTTTTCCCCTTCGTCGGCAACGCAATTCCTCTGGTCAGGAACCCTGCCCGCTTCTGGGAGATTCAGGCCTCTTTGGCTAAATCCTCCGGCGTTGGCTTCTCTGTCAACTACATAGCCGGAAACTTCATCGTCTTCATTCGCGACACTGAGCTCTCTCACAAGATTTTCGCCAATGTGCGTTCCGACGCTATGAACCTCGTCGGTCATCCCTTCGGGAAGAAGCTTTTCGGTGAGGATAATCTGATTTACATGTTAGGCCAAAAGCATAAGGATCTGCGCCGTCGAATCGCTCCTAATTTCACGCCCAAAGCGCTCTCCACATACACCGCGCTTCAGCAGATCATTATACTAAAGCATTTGAAACTTTGGGATCAGAAGTCGTCGGAGTCCTCGCCGAAGCCGATTCCCTTGAGGTTTCTGGCTCGAGATCTTAACCTTGAAACCTCTCAGATGGTGTTCGTCGGGCCGTATTTAGGCGAAAAGGTTCGCGAAAAGTTCAGAGTCGATTACAACCTCTTCAATGTCGGCCTGATGAAACTTCCAATCGACTTGCCTGGAACAGGTTTTAGAAACGCGAGACTCGCCGTCAACCGGCTGGTGGAGGTCCTTGCCGACTGCGCAGAGAAGAGCAAGGTGAAGATGAAAAGAGAAGAAGAGCCGTCGTGTTTGATAGACTTTTGGATGCAGGACACCGTGAAGGAACTCGAGGCTGCAGCGGCGGCTGGCGAGGCGGAGCCCGTTCACACCAGTAACTACGAGCTCGGGCTGTATCTCTTCGATTTCCTCTTCGCCGCTCAAGACGCTTCAACTTCTTCGCTTCTGTGGGCCGTCAGTCTCCTCGACTCGCATTCCGAGGTGGTCGCCAAAGTTCGGGACGAAGTCAAATCAATCTGGTCGCCGGAATCTGACTCACTGATCTCATCAGAGCAGCTTCTGGAAATGAAGTACACTCAGGCAGTGGCCCGTGAAGTGGTCCGGTACCGCGCTCCGGCAACCGTGGTGCCGCACGTGGCGGCGGCGGAGTTCCCGTTGACTGATTCATACACGATTCCAAAAGGCGCAATCGTGTTCCCATCTGCGTACGAGTCGAGCTTCCAGGGTTTCATCGAACCGGAACGGTTCGATCCGGACCGGTTCTCGGAGGAAAGGCAAGAGGACCGAATTTTCAAAAGAAACTTTCTGGCATTCGGTGCTGGGTCCCACCAGTGTGTTGGGCAACGGTACGCCTTCAACCAACTGGTTCTCTTCATCGCCATGTTTTGTTCGTTGCTTGATTTCAAGCGGCACAGATCTGACGGCTGTGATGAAATCGCCTTCAATCCCACTATCTGTCCCAAAGATGACTGCATGGTCTCCATCTCCCGGCGGTGCCCTCGATTCCCCAATCTCTCGCTTTAA | 1524 | 52.82 | MNSLLAFLSPLLPFVASLVFLLLFLEQISYLKKKRSVPGPPLVFPFVGNAIPLVRNPARFWEIQASLAKSSGVGFSVNYIAGNFIVFIRDTELSHKIFANVRSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALSTYTALQQIIILKHLKLWDQKSSESSPKPIPLRFLARDLNLETSQMVFVGPYLGEKVREKFRVDYNLFNVGLMKLPIDLPGTGFRNARLAVNRLVEVLADCAEKSKVKMKREEEPSCLIDFWMQDTVKELEAAAAAGEAEPVHTSNYELGLYLFDFLFAAQDASTSSLLWAVSLLDSHSEVVAKVRDEVKSIWSPESDSLISSEQLLEMKYTQAVAREVVRYRAPATVVPHVAAAEFPLTDSYTIPKGAIVFPSAYESSFQGFIEPERFDPDRFSEERQEDRIFKRNFLAFGAGSHQCVGQRYAFNQLVLFIAMFCSLLDFKRHRSDGCDEIAFNPTICPKDDCMVSISRRCPRFPNLSL | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8790044 | 8791567 | - | CmaCh03G013920.1 | Cma03g01392 | 290963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma03g01392 | 507 | PRINTS | E-class P450 group IV signature | 297 | 323 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PRINTS | E-class P450 group IV signature | 356 | 372 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PRINTS | E-class P450 group IV signature | 404 | 422 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PRINTS | E-class P450 group IV signature | 429 | 445 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PRINTS | E-class P450 group IV signature | 445 | 463 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PANTHER | CYTOCHROME P450 26 | 14 | 495 | - | - | |
Cma03g01392 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506|GO:0016705 | |
Cma03g01392 | 507 | SUPERFAMILY | Cytochrome P450 | 30 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | PANTHER | CYTOCHROME P450 61 | 14 | 495 | - | - | |
Cma03g01392 | 507 | Gene3D | Cytochrome P450 | 28 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma03g01392 | 507 | Pfam | Cytochrome P450 | 38 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g01392 | Cma-Chr3:8790044 | Cma14g01950 | Cma-Chr14:13730248 | 1.24E-31 | dispersed | |
Cma03g01392 | Cma-Chr3:8790044 | Cma07g00114 | Cma-Chr7:616977 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma03g01392 | K09832 | - | csv:101221194 | 911.368 |