Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01392 ATGAATTCGCTTCTGGCTTTTCTTTCGCCACTGCTTCCGTTCGTGGCCTCTCTTGTGTTTCTGCTCCTCTTTCTCGAGCAGATCTCTTATTTGAAGAAGAAGCGCTCTGTTCCTGGTCCTCCTCTCGTTTTCCCCTTCGTCGGCAACGCAATTCCTCTGGTCAGGAACCCTGCCCGCTTCTGGGAGATTCAGGCCTCTTTGGCTAAATCCTCCGGCGTTGGCTTCTCTGTCAACTACATAGCCGGAAACTTCATCGTCTTCATTCGCGACACTGAGCTCTCTCACAAGATTTTCGCCAATGTGCGTTCCGACGCTATGAACCTCGTCGGTCATCCCTTCGGGAAGAAGCTTTTCGGTGAGGATAATCTGATTTACATGTTAGGCCAAAAGCATAAGGATCTGCGCCGTCGAATCGCTCCTAATTTCACGCCCAAAGCGCTCTCCACATACACCGCGCTTCAGCAGATCATTATACTAAAGCATTTGAAACTTTGGGATCAGAAGTCGTCGGAGTCCTCGCCGAAGCCGATTCCCTTGAGGTTTCTGGCTCGAGATCTTAACCTTGAAACCTCTCAGATGGTGTTCGTCGGGCCGTATTTAGGCGAAAAGGTTCGCGAAAAGTTCAGAGTCGATTACAACCTCTTCAATGTCGGCCTGATGAAACTTCCAATCGACTTGCCTGGAACAGGTTTTAGAAACGCGAGACTCGCCGTCAACCGGCTGGTGGAGGTCCTTGCCGACTGCGCAGAGAAGAGCAAGGTGAAGATGAAAAGAGAAGAAGAGCCGTCGTGTTTGATAGACTTTTGGATGCAGGACACCGTGAAGGAACTCGAGGCTGCAGCGGCGGCTGGCGAGGCGGAGCCCGTTCACACCAGTAACTACGAGCTCGGGCTGTATCTCTTCGATTTCCTCTTCGCCGCTCAAGACGCTTCAACTTCTTCGCTTCTGTGGGCCGTCAGTCTCCTCGACTCGCATTCCGAGGTGGTCGCCAAAGTTCGGGACGAAGTCAAATCAATCTGGTCGCCGGAATCTGACTCACTGATCTCATCAGAGCAGCTTCTGGAAATGAAGTACACTCAGGCAGTGGCCCGTGAAGTGGTCCGGTACCGCGCTCCGGCAACCGTGGTGCCGCACGTGGCGGCGGCGGAGTTCCCGTTGACTGATTCATACACGATTCCAAAAGGCGCAATCGTGTTCCCATCTGCGTACGAGTCGAGCTTCCAGGGTTTCATCGAACCGGAACGGTTCGATCCGGACCGGTTCTCGGAGGAAAGGCAAGAGGACCGAATTTTCAAAAGAAACTTTCTGGCATTCGGTGCTGGGTCCCACCAGTGTGTTGGGCAACGGTACGCCTTCAACCAACTGGTTCTCTTCATCGCCATGTTTTGTTCGTTGCTTGATTTCAAGCGGCACAGATCTGACGGCTGTGATGAAATCGCCTTCAATCCCACTATCTGTCCCAAAGATGACTGCATGGTCTCCATCTCCCGGCGGTGCCCTCGATTCCCCAATCTCTCGCTTTAA 1524 52.82 MNSLLAFLSPLLPFVASLVFLLLFLEQISYLKKKRSVPGPPLVFPFVGNAIPLVRNPARFWEIQASLAKSSGVGFSVNYIAGNFIVFIRDTELSHKIFANVRSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALSTYTALQQIIILKHLKLWDQKSSESSPKPIPLRFLARDLNLETSQMVFVGPYLGEKVREKFRVDYNLFNVGLMKLPIDLPGTGFRNARLAVNRLVEVLADCAEKSKVKMKREEEPSCLIDFWMQDTVKELEAAAAAGEAEPVHTSNYELGLYLFDFLFAAQDASTSSLLWAVSLLDSHSEVVAKVRDEVKSIWSPESDSLISSEQLLEMKYTQAVAREVVRYRAPATVVPHVAAAEFPLTDSYTIPKGAIVFPSAYESSFQGFIEPERFDPDRFSEERQEDRIFKRNFLAFGAGSHQCVGQRYAFNQLVLFIAMFCSLLDFKRHRSDGCDEIAFNPTICPKDDCMVSISRRCPRFPNLSL 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8790044 8791567 - CmaCh03G013920.1 Cma03g01392 290963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01392 507 PRINTS E-class P450 group IV signature 297 323 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PRINTS E-class P450 group IV signature 356 372 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PRINTS E-class P450 group IV signature 404 422 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PRINTS E-class P450 group IV signature 429 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PANTHER CYTOCHROME P450 26 14 495 - -
Cma03g01392 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cma03g01392 507 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 PANTHER CYTOCHROME P450 61 14 495 - -
Cma03g01392 507 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g01392 507 Pfam Cytochrome P450 38 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01392 Cma-Chr3:8790044 Cma14g01950 Cma-Chr14:13730248 1.24E-31 dispersed
Cma03g01392 Cma-Chr3:8790044 Cma07g00114 Cma-Chr7:616977 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01392 K09832 - csv:101221194 911.368