Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma03g01461 | ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGACTCCACCGCTTCTCTCGTCGCTTCCTCCAACCTCCCTCTCAATGTTCCCTTCGCTCCCTTCTCTCGCTCCGATAGGCTTGGCCGGATCGCTGATTGGACCCGAACTATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTCGACTTCACCAATGACGATTCCTTCCCAGCCAATGCTGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGATCGTCTTTACAACCTCAATAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCAGTTTTCAAATCCTCTGTGGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACGTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGTGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACAGACGACCCTGTCATTCGTCGTCTTGCAAACGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTTCCCTTATGTGCGCAACCAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTCCCGTCCACGAGACTTCTCAGGAACCCTTGCCAGAAGCGAAGGACGATATCAATTCAGCTTACTCACTGAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTGGTTAGGGACGGAAGTAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAGCTCGATGATGACATGTATCTTGTGGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTTTTGACTCTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCTCTGTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGCGATCACTTCAACCATGTCATCTTAGCCATTGTTGGATATAAACCTAAGGATTTTGCAGCTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTTAAGTCTATCGTGGATTTGTGCATGAAATTGAACGAAGGCAAGTATGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGTCACTGTTAATGCGGGGACGGATGATGCAGAAGAGAAGGGCTCTATTCGCTATGCAGCATTCACCGGAGAAGATGCTTGCTAG | 1725 | 49.04 | MVGGFEVGAVPYNPDGWGPPDSTASLVASSNLPLNVPFAPFSRSDRLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSSLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLPVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGSKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAIVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGVTVNAGTDDAEEKGSIRYAAFTGEDAC | 574 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9122111 | 9124323 | - | CmaCh03G014610.1 | Cma03g01461 | 291032 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma03g01461 | 574 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 6 | 517 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cma03g01461 | 574 | Coils | Coil | 118 | 138 | - | - | |
Cma03g01461 | 574 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D | 4 | 557 | - | - | |
Cma03g01461 | 574 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cma03g01461 | 574 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Cma03g01461 | 574 | MobiDBLite | consensus disorder prediction | 532 | 556 | - | - | |
Cma03g01461 | 574 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cma03g01461 | 574 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 557 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cma03g01461 | 574 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g01461 | Cma-Chr3:9122111 | Cma07g00049 | Cma-Chr7:296027 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma03g01461 | K03251 | - | csv:101208923 | 1084.71 |