Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01461 ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGACTCCACCGCTTCTCTCGTCGCTTCCTCCAACCTCCCTCTCAATGTTCCCTTCGCTCCCTTCTCTCGCTCCGATAGGCTTGGCCGGATCGCTGATTGGACCCGAACTATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTCGACTTCACCAATGACGATTCCTTCCCAGCCAATGCTGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGATCGTCTTTACAACCTCAATAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCAGTTTTCAAATCCTCTGTGGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACGTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGTGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACAGACGACCCTGTCATTCGTCGTCTTGCAAACGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTTCCCTTATGTGCGCAACCAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTCCCGTCCACGAGACTTCTCAGGAACCCTTGCCAGAAGCGAAGGACGATATCAATTCAGCTTACTCACTGAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTGGTTAGGGACGGAAGTAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAGCTCGATGATGACATGTATCTTGTGGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTTTTGACTCTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCTCTGTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGCGATCACTTCAACCATGTCATCTTAGCCATTGTTGGATATAAACCTAAGGATTTTGCAGCTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTTAAGTCTATCGTGGATTTGTGCATGAAATTGAACGAAGGCAAGTATGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGTCACTGTTAATGCGGGGACGGATGATGCAGAAGAGAAGGGCTCTATTCGCTATGCAGCATTCACCGGAGAAGATGCTTGCTAG 1725 49.04 MVGGFEVGAVPYNPDGWGPPDSTASLVASSNLPLNVPFAPFSRSDRLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSSLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLPVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGSKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAIVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGVTVNAGTDDAEEKGSIRYAAFTGEDAC 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9122111 9124323 - CmaCh03G014610.1 Cma03g01461 291032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01461 574 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cma03g01461 574 Coils Coil 118 138 - -
Cma03g01461 574 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 4 557 - -
Cma03g01461 574 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cma03g01461 574 MobiDBLite consensus disorder prediction 114 134 - -
Cma03g01461 574 MobiDBLite consensus disorder prediction 532 556 - -
Cma03g01461 574 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cma03g01461 574 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 557 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cma03g01461 574 MobiDBLite consensus disorder prediction 88 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01461 Cma-Chr3:9122111 Cma07g00049 Cma-Chr7:296027 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01461 K03251 - csv:101208923 1084.71