Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g01472 ATGGATATCATTCACCGTGCACGTCTACTATGCGCTGTTGTATGTTTTGGGATGTTTATATGCGCATCTTGTCTGGACGAATTCGGTGATTCAACAGCTGTGTACATTGTAACCCTCAAGGAACCTCCTACTACTCATTACTATGGTCAGCTTAGGCAGAATACCACTTCTTTTAGGCTCGGTGCTTCTGGTGGATTAAGCATCCACAAACCAAGAAACGTGTCAAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAGAAATACTTAAAGCTGTACAGTTACCATTTCTTGATCAACGGATTTGCTGTGCTTGTTACTGAACAACAGGCTAATAAACTTTCAAAGAGAATGGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGGCTTCCTCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAAAGTGCTGGAGCTGGGATTGTGATGGGGTTCGTTGACACTGGCATTGACCCTTCTCACCCCAGCTTTGCTGATGATTTGAGTGATAAACCATTTCCAGTTCCACCCCACTTCTCTGGAATCTGTGAGGTGACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCTTCACCATTTGATGGTGATGGGCATGGCACGCACACAGCTTCCATTGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCGCACATTGCTGTTTATAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTCGATCAGGCTGCTCAGGATGGGGTGGATATAATAAATTTATCAATCACACCGAACAGGCGTCCACCGGGTATTGCAACGTTTTTTAATCCCATAGATATGGCATTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGTAACACTGGTCCAGCACCTAAGAGCATGTCTTCCTTCAGTCCATGGATCTTCACTGTTGGGGCTGCTTCTCACGACAGAAGCTATGCTAACTCGATAAGCCTTGGCAATAATGTCACCATCCCGGGAGTCGGACTTGCTCCTGGAACTTATAATGGCACAAAGTACAAACTAATTGCTGCAATACACGCTTTAAACAATGGCACAAACGTGTCGGCGGACATGTACGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGATCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTGGGGCTTTCCACAGTTAAACAAGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATACCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATATTACAATTCTTCCCTGGAAGTAGATGGATTAACAAAGAGAATTTCAAAATTTGGAGCTGTTGCTAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATCATGTACTATTCTGCTAGAGGACCAGACCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTGGGTGAAAGCTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGTCTAGCCTCACTGGTAAAGCAGAAGTACCCCAGTTTTAGTCCTTCAGCCATTGCATCTGCACTATCCACAACTGCTTCTCTTTACGACAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACCAGTCTCCAGCTACGCCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCGACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGTGGAATCAATGGATCATCCCCTGTGGTGTTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCCAGTATCAGTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCAAGAGTGGTGCAACGAACCGTGACCAACATAGCTGGACCTGAGATTTATAATGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCGACTCGATTTACAATCGACAGCGGCAAGAAACAAGAGCTAACCATATTCTTGAACGTGACGATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTGTTTCAGTAATTTTGAAGATCTCATATAACAACACTGCTAATTGA 2532 44.67 MDIIHRARLLCAVVCFGMFICASCLDEFGDSTAVYIVTLKEPPTTHYYGQLRQNTTSFRLGASGGLSIHKPRNVSRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEQQANKLSKRMEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVMGFVDTGIDPSHPSFADDLSDKPFPVPPHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIINLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNGTKYKLIAAIHALNNGTNVSADMYVGECQDSSNFDQDLIQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKRISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGESFAMMSGTSMAAPHIAGLASLVKQKYPSFSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALDPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEIYNVGWSAPYGISLKVSPTRFTIDSGKKQELTIFLNVTMNSSVASFGRIGLFGSAGHIINIPVSVILKISYNNTAN 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9160989 9165738 + CmaCh03G014720.1 Cma03g01472 291043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g01472 843 Gene3D Peptidase S8/S53 domain 172 706 IPR036852 GO:0004252|GO:0006508
Cma03g01472 843 ProSitePatterns Serine proteases, subtilase family, serine active site. 616 626 IPR023828 -
Cma03g01472 843 Gene3D - 710 834 - -
Cma03g01472 843 PRINTS Subtilisin serine protease family (S8) signature 170 189 IPR015500 -
Cma03g01472 843 PRINTS Subtilisin serine protease family (S8) signature 250 263 IPR015500 -
Cma03g01472 843 PRINTS Subtilisin serine protease family (S8) signature 615 631 IPR015500 -
Cma03g01472 843 Pfam Fibronectin type-III domain 739 832 IPR041469 -
Cma03g01472 843 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 836 - -
Cma03g01472 843 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 836 IPR045051 -
Cma03g01472 843 SUPERFAMILY Subtilisin-like 145 697 IPR036852 GO:0004252|GO:0006508
Cma03g01472 843 CDD PA_subtilisin_like 391 526 - -
Cma03g01472 843 CDD Peptidases_S8_3 145 652 IPR034197 -
Cma03g01472 843 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 143 IPR037045 -
Cma03g01472 843 Gene3D - 385 553 - -
Cma03g01472 843 Pfam Peptidase inhibitor I9 34 145 IPR010259 -
Cma03g01472 843 ProSiteProfiles Serine proteases, subtilase domain profile. 150 693 - -
Cma03g01472 843 Pfam Subtilase family 170 663 IPR000209 GO:0006508|GO:0008236
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01472 Cma18g00570 CCT
Cma03g01472 Cma07g00037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01472 Cma-Chr3:9160989 Cma12g00908 Cma-Chr12:6963550 0 dispersed
Cma03g01472 Cma-Chr3:9160989 Cma07g00037 Cma-Chr7:249454 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g01472 - - bhj:120074717 1576.22