Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00045 ATGATGAGGACATTGAGATGCTCTACCCTTTTCGTCTTTGTTGTGTTCTTCGTAGGATGCCTTGGCGTCGAAGAAAACAAGGAGGAGAAGAAACATTTCATTGTCTTTCTGGAGAACCAACCTATTCTGACTGAGGTTGATGCAGTAGACAATCATCTCAATGTCCTCATGTCACTCAAGGAAAGCCATGTGGAGGCAAAGGAGGCGATGGTGTATAGCTACACCAAAAGCTTCAATGCTTTTGCAGCCAAGCTTACAGAACAGGAAGCCAACACATTGTCAAAGAGGGGCGATGTGACTCATGTGATCCCAAACAGACGTAGACAGATTCAAACCACCCGATCATGGGACTTCATTGGATTTCCTTCCCATGCAAAAAGACTGCCCAACCGGGAGTCTAACATTATTGTGGGTTTATTTGATACGGGGATCTCCCCAACAGCCGATAGCTTTAAAGATGATGGGTTTGGTCCTCCACCTAAAAAATGGAAAGGCATCTGCCAAAAATCTGCCAATTTCTCTGGTTGCAACAACAAACTCATTGGAGCTAGATATTTCATGCTCGACGGCAGCGCTGAACCCCTAGACATTATGGCACCGGTAGACGTCACCGGCCATGGAACGCACACGTCCTCAACAGCGGCAGGCAATGTAATTGCTGGAGCCAGTCTCTCTGGTCTGGCCAAAGGAACAGCCCGTGGTGGTGTGCCATCTGCAAGAGTTGCCATGTACAAGGTCTGCTGGGTCGGTGTTGGGTGCACTGATATGGATATTCTGGCTGCCTTCGACGCTGCCATAGACGATGGCGTTGATGTCATTTCGATATCGATCGCAGGCACCGGCTACAACAATTACTCTGAGGACGTGATGGCCATTGGTGCCTTTCAGGCCATGCAGAAGGGCATCATCACTGTGGCCGCCGCTGGCAACACTGGTCCGGCAACTGGCAGTGTCGTCAACACCGCGCCGTGGATTGTGACGGTTGGTGCCAGTACGATTGATCGGGAATTTGTCACTAAGTTGGAGTTGGGCAATGGGTGGAACATCTCTGGAGTAGGAATAAACCTATTCAATGGACAACCAAAAATGTACCCTTTAGTTGATGGAGGCGATGTGGCCAAGAATCCAGGGGACAAAACCAGTGCGAACTTTTGCATGGAGGGTTCACTTGATCCAACCAAGGCCAATGGCAAGCTTGTGTTCTGTCAATTGATGATCTGGGGCGCTGATTCCGCTGTCAAAGCAGCTGGTGCCCATGGCGCTGTGATTCAAAGTGATCAGTACTATCTTGATCATACCGATCTCTTCATGGTTCCAGCCACCTTGGTTAATAGCACCATTGGTCAAACCATTGAAGCCTACATAAAGTCCACTAAAACACCGACGGCAATAGTATACAGAACAGTGCAACGGCAAGCAGCTGCTCCATTCGTGGCTTCCTTCTCAGCTAGAGGCCCAAATCAACGCTCCCGCTTCATTCTAAAGCCGGACATAGTCGCACCAGGAGTGAACATATTGGCAGCCTACACACCACTGAATTCACTGACGGGGCTCAAGGGTGACACCCAACACTCAAAATTCTCTCTCTTGTCTGGCACTTCAATGGCCTGCCCTCACGTGGCCGGCGCCGCCGCCTATGTCAAGTCTTTCCACCCTCATTGGTCTCCCGCGGCCATTAGATCCGCCTTGATCACCACGGCGAAACCTCTAAGGCGAGTACAGAGCCCGGATGGGGAATTCGGGTACGGTGCGGGACTTCTAGATCCAGATAGAGCCAGAGAACCGGGGCTAATCTACGAGGTGGACAAAATGTCGTACATCCAACACCTTTGCAAACAAGGGTACAACGGATCTTCAATTTCCATCCTCACCGGAGCAGGACCCGTAGACTGCTCCACTCTAATCCCCGCCCAGGGCCAAGACTCTCTCAACTACCCAACCTTTCAACTCAGCCTCAATAAAACTCGACACCCGACAACCGCCGTCTTCTGGCGACAGGTCACCAATGTTGGTCGTCCGGCCTCCGTCTACAAGGCTACCATCACGGCTCCCCCTGGGGTCAAGATCACAGTGGAACCAACGTCTCTGTCGTTCTCGTCTTTGCAGCAGACGCGGAGCTTTAAGGTGGTTGTGAAGGCCAATCCTTTGCCGCCGCAAAACATGGTATCTGGTTCGCTTACGTGGGCTGATGCTAACTATGTTGTCAGAAGTCCGATTGTTATTTACACACACGAGGACTTTGGACATGATGAGGGTTTGATTGTATGA 2268 50.75 MMRTLRCSTLFVFVVFFVGCLGVEENKEEKKHFIVFLENQPILTEVDAVDNHLNVLMSLKESHVEAKEAMVYSYTKSFNAFAAKLTEQEANTLSKRGDVTHVIPNRRRQIQTTRSWDFIGFPSHAKRLPNRESNIIVGLFDTGISPTADSFKDDGFGPPPKKWKGICQKSANFSGCNNKLIGARYFMLDGSAEPLDIMAPVDVTGHGTHTSSTAAGNVIAGASLSGLAKGTARGGVPSARVAMYKVCWVGVGCTDMDILAAFDAAIDDGVDVISISIAGTGYNNYSEDVMAIGAFQAMQKGIITVAAAGNTGPATGSVVNTAPWIVTVGASTIDREFVTKLELGNGWNISGVGINLFNGQPKMYPLVDGGDVAKNPGDKTSANFCMEGSLDPTKANGKLVFCQLMIWGADSAVKAAGAHGAVIQSDQYYLDHTDLFMVPATLVNSTIGQTIEAYIKSTKTPTAIVYRTVQRQAAAPFVASFSARGPNQRSRFILKPDIVAPGVNILAAYTPLNSLTGLKGDTQHSKFSLLSGTSMACPHVAGAAAYVKSFHPHWSPAAIRSALITTAKPLRRVQSPDGEFGYGAGLLDPDRAREPGLIYEVDKMSYIQHLCKQGYNGSSISILTGAGPVDCSTLIPAQGQDSLNYPTFQLSLNKTRHPTTAVFWRQVTNVGRPASVYKATITAPPGVKITVEPTSLSFSSLQQTRSFKVVVKANPLPPQNMVSGSLTWADANYVVRSPIVIYTHEDFGHDEGLIV 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 229069 232266 + CmaCh04G000450.1 Cma04g00045 291126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00045 755 Pfam Peptidase inhibitor I9 45 110 IPR010259 -
Cma04g00045 755 Gene3D Peptidase S8/S53 domain 134 606 IPR036852 GO:0004252|GO:0006508
Cma04g00045 755 Gene3D - 610 744 - -
Cma04g00045 755 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 33 743 - -
Cma04g00045 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Cma04g00045 755 CDD PA_subtilisin_like 341 463 - -
Cma04g00045 755 CDD Peptidases_S8_3 109 567 IPR034197 -
Cma04g00045 755 Pfam Subtilase family 133 583 IPR000209 GO:0006508|GO:0008236
Cma04g00045 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 743 IPR045051 -
Cma04g00045 755 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Cma04g00045 755 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Cma04g00045 755 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Cma04g00045 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Cma04g00045 755 ProSiteProfiles Serine proteases, subtilase domain profile. 115 593 - -
Cma04g00045 755 Pfam Fibronectin type-III domain 643 741 IPR041469 -
Cma04g00045 755 SUPERFAMILY Subtilisin-like 113 593 IPR036852 GO:0004252|GO:0006508
Cma04g00045 755 Gene3D - 334 471 - -
Cma04g00045 755 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00045 Cma-Chr4:229069 Cma04g00183 Cma-Chr4:886209 0 dispersed
Cma15g01081 Cma-Chr15:6879202 Cma04g00045 Cma-Chr4:229069 2.29E-176 dispersed
Cma04g00045 Cma-Chr4:229069 Cma04g00994 Cma-Chr4:5129626 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00045 - - cmo:103495168 1031.55