Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00046 | ATGCTTGCAGCTTCAGCTGCTGCTGTGGATCAACAGACCTACATTGTTCACATGGACACCACCAAGATGGTGGCCACCACCAGCCCTGAACAATGGTACTCAGCCATGATTCATTCAGTCAATAAAATCTCATCTCTACACCAAGATGAAGAAGAAGCGTCAAATGCTGCTGAGATTCTCTACGTCTACAAAACTGCTATTTCAGGTTTTGCTGCCAAACTCACCACCAAAAAGCTTCATTCTTTAAGTAAGATCCCAGGCTTTCTGGCCGCCACTCCTGATGAACTACTACAGCTACACACCACCCACTCCCCTCAGTTTCTGGGCCTACACAGAGAGCATGGCCTTTGGAATTCTTCAAACTCAGCTTCTGATATAATTATTGGTTTGATTGATTCTGGCATTTGGCCTGAGCATATAAGTTTTCAGGACAAGGGTCTGCCCCCAGTGCCTAAAAAATGGAAAGGCGCTTGTGAAGCAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAAGCTCGTTGGAGCAAGAGCCTATATTGATGGCTACGAGGCCATTGTCGGTCGATTGAACGTAACGGGAACGTTTCGATCGCCTCGAGACTCGAATGGGCATGGCACACACACAGCGTCGACTGCTGCTGGAAATATTGTGAACAAAGCAAGCCTCTATAGCCAAGGCAAGGGGGTAGCCACTGGCATCAGTTTCACTTCAAGGATCGCAGCGTACAAAGCATGTTGGCCAATGGGGTGTGCCAATGCCGATATTTTGGCAGCCATGGACCGTGCAGTCGCTGATGGAGTTGACATTTTATCGCTCTCTTTAGGCGGTGGTGTTACTGCTTTTTACAAAGACAATATCGCCATAGCTGCATTTGGTGCTGTTCAAAATGGAGTTTTTGTGTCATGTTCAGCTGGTAATTTTGGCTCATTATTTCGCTCAGCTGTAAGCAATGCAGCGCCATGGATCATGACAGTCGCTGCTAGCTACACTGATAGAACATTCCCAACCACTGTAAAGCTTGGAAATGGACAAGTTTTCGAAGGCTCTTCTTTGTACTCTGGACAGAACACAGCTGAACTCCCACTTGTTTATAACAACACTGTAGGTGGCCAAGAAGCAAATCTTTGCACGCCTGGTTCACTTGTCCCAGCAATGGTGAAGGGCAAAATTGTGGTGTGTGGACGAGGCAAAAACCCGAGAGTTGCCAAAGGAGAGCAGGTCAAATTAGCAGGAGGAGCTGGGATGATTCTGATCAACACACAACTTGATGGCGAGGAGCTTTTTGCAGAGCCTCATGTTCTCCCAGCAACTTCTCTCGGAGCTTCAGCTACCAAAGCCATGTTGGACTATATAGCTTCCTCCAAGAATCAACCAACAGCTTCCATCGGGTTCCAGGGGACTAAATATGGAAGCAGAGCACCTAAAGTGGCTGCCTTTTCTTCTCGAGGGCCGAGCTTAATTGGACCGGATGTTATAAAGCCAGACGTAACTGCACCTGGTGTTAACATATTAGCTGCTTGGCCACCCATTGTGAGCCCAAGTGAGCTTGAGTTTGATAAAAGAAGAGTGTTGTTCAATATCATTTCAGGGACTTCTATGTCTTGCCCTCATGTTAGCGGCTTAGCTGCATTAATCAAATCGGCACACAACAACTGGTCGCCTGCTGCCATTAAATCTGCGCTCATGACAACAGCTTACACTACTGACAACAAAATGAGTCCCATTTCAGATGTCAGCCACCCCAACGGCGAACCGGCGGATCCATTTGCGATTGGCTCCGGCCATGTCGATCCCGAGAAAGCTTCCGATCCCGGACTCGTCTACGATATCGCACCCGGAGACTACCTAAACTACTTATGTAGCTTGAACTATAGTTCAACACAAATTGGTCTACTTTCAAAAGGGAATTTCAGTTGCCCATCAAAAAGAGAAGTTGTTGAGCCAGGGGACTTGAACTACCCTTCATTCTCAGTGATTATGAAGGCCAAAAATGTTAGCGTTACATTGAAAAGAACAGTCACAAACGTTGGTTACCCAATGAGTGATTACAGTGTCCAAATCAACAATCCAAAAGGAGTGGAAATGATTGTGAAGCCGAAGAGGTTGAGTTTTGAGAGATCAGGAGAGAAGTTGAGTTACAAAGTGAGTTTTGTTGCATTGGAAGAAGCAGAAGATTTGGGTGAGTTTTCGTTTGGATCTGTTGTTTGGGTGTCGGGGAAGTATCGTGTAAGAAGTCCTGTAGCAGGGGAGGGGTATGAAGAGTGCAACAAGGATAATTGGTTTGGTGATTTTGCTCGTGTATGCAGCCACACAATGGGGTTTAGGGAAGTATGCCTGTTTTTGTCAATATTCCTTGCAACCTCGGCTGCTGCTGTGGATCAACAATCCTACATCATTCACATGGACACCACCAAGATGGCCGCCCCCAGCCCCGAACAATGGTACACAGCCTTGATTGATTCTATCAATAAAATCTCATCTTTAGACGACCAAGAAGAAGCATCAAGTGCTGCCCAGATTCTTTACGTCTACAAAACTGCTATTTCAGGTTTTGCTGCCAAGCTCTCCACCAAAAAGCTTCATTCTTTAAGCAAGACTCCTGGCTTTCTGGCAGCCACTCCTAATGAACTACTACAGCTTCACACTACCCACTCCCCTCAGTTTCTGGGCCTACAAAGAGAGCATGGCCTTTGGAATTCTTCAAACTTAGCTTCTGATATAGTTATTGGTTTGCTTGACACTGGAATTTGGCCTGAGCATATAAGCTTTCAGGACAAGGGTCTTCCCCCAGTGCCTAAAAAATGGAAGGGCACTTGTCAAGCAGGCCAAAAGTTTTCACCTTCCAATTGCAACAGGAAACTCATTGGCGCAACAGCCTACATTAAAGGCTACGAAGCAATCGTCGGTCGATTGAACGCAACGGGAACGTTCCGATCGCCCCGAGACTCGGATGGGCACGGCACACACACAGCATCCACTGCTGCTGGAAATATTGTCAACAAAGCTAGCTTTTTTAACCAAGCCATGGGAGTAGCCACTGGAATGAGGTTCACTTCAAGGATTGCAGCGTACAAAGTATGCTGGACGGAGGGGTGCGCCAACGCCGACATTTTGGCAGCCATAGACCGCGCAGTTGCCGATGGCGTTGATGTTCTGTCCCTCTCTTTGGGCGGCAGTGCTAGTGCCTTTTACAAAGATGATATTGCCATAGCTACATTTGGTGCTGTTCGAAATGGGGTTTTCGTGTCATGTTCAGCTGGTAATTCTGGCCCATCTAGCTCAACGGTTAGTAATATAGCCCCATGGATCATGACAGTCGCTGCCAGCTACACCGATAGAACCTTCCCAGCCACTGTTAAACTTGGAAATGGACAAGTTTTTGAAGGTTCTTCTTTGTATTCTGGGAACAGCATAGGTCAACTCCCACTTGTTTACAACAATACTGCTGGAGGAGAAGAAGCAAATGTTTGTACAGCTGGTTCACTCGTCCCATCACTGGTGAAGGGTAAAATTGTGGTATGTGAAAGAGGAACAAACTCGAGAACAGCGAAAGGAGAGCAAGTGAAGTTAGCAGGCGGTGCTGGAATGATTCTGATCAACACACAACTCGAAGGTGAGGAGCTTTTTGCTGACCCTCATGTGTTACCTGCCGCTAATCTTGGAGCTTCAGCTGGCCAAGCCATCATCCGCTACATATCTTCCTCCAAGCATCAACCAAAAGCTTTGATCGCATTTGAAGGGACCAAATTCGGAAACCGAGCGCCGAGAGTGGCTGCGTTCTCTTCTCGAGGGCCGAGCTTAATTGCACCGGATGTCATAAAGCCAGACGTAACTGCACCTGGGGTTAATATATTAGCTGCTTGGCCACTCATTGCCAGCCCAAGTGAGCTGGAGTCTGATAAGAGGAGAGTGTTGTTCAATATCATTTCAGGGACTTCTATGTCTTGCCCCCATGTTAGTGGCTTAGCTGCACTGCTTAAATCAGCGCACAAGGATTGGTCACCTGCAGCCATCAAATCTGCACTCATGACCACAGCGTACACTAATGACAACAGAATGAGTCCCATTTCGGACGTTGGGTCTGAGAGCGGCAAACCCGCAAACCCTTTTGCATTCGGTTCTGGTCATGTGGATCCGGAGAAAGCCTCTGATCCAGGGCTGATCTATGATATCACGCCCCAAGACTACCTAAACTACTTCTGTAGCTTGAACTATAATTCAACACAAATTGGCTTAGTTTCAAGAGGGAACTTCACATGTCCATCAAAGAGAAGAGTTGGTCAGCCAGGGAACTTGAACTACCCTTCCTTCTCCGTGTTCATGAAGAAGAAAGCCAAGAATGTTAGTGTTACGTTGAAGAGAACGGTCACAAATGTTGGTCGCCCAAGAAGTGATTACACTGTCAAAATCAAGAATCCAAAGGGAATAGGGATTCGTGTGGAGCCTGAGAAGTTGAGTTTTAGGAGATACGGACAGAAGCTGAGTTACCAAGTGAGCTTCGTTGCATTGGGTAAAAGAGAAGGTTTGGGTGGATTTTCTTTTGGATCTCTTGTTTGGGTGTCGGGAAAATATGGTGTGAGAAGTCCTATAGCCGTAACTTGGAAGTAG | 4611 | 46.76 | MLAASAAAVDQQTYIVHMDTTKMVATTSPEQWYSAMIHSVNKISSLHQDEEEASNAAEILYVYKTAISGFAAKLTTKKLHSLSKIPGFLAATPDELLQLHTTHSPQFLGLHREHGLWNSSNSASDIIIGLIDSGIWPEHISFQDKGLPPVPKKWKGACEAGPKFSPSNCNKKLVGARAYIDGYEAIVGRLNVTGTFRSPRDSNGHGTHTASTAAGNIVNKASLYSQGKGVATGISFTSRIAAYKACWPMGCANADILAAMDRAVADGVDILSLSLGGGVTAFYKDNIAIAAFGAVQNGVFVSCSAGNFGSLFRSAVSNAAPWIMTVAASYTDRTFPTTVKLGNGQVFEGSSLYSGQNTAELPLVYNNTVGGQEANLCTPGSLVPAMVKGKIVVCGRGKNPRVAKGEQVKLAGGAGMILINTQLDGEELFAEPHVLPATSLGASATKAMLDYIASSKNQPTASIGFQGTKYGSRAPKVAAFSSRGPSLIGPDVIKPDVTAPGVNILAAWPPIVSPSELEFDKRRVLFNIISGTSMSCPHVSGLAALIKSAHNNWSPAAIKSALMTTAYTTDNKMSPISDVSHPNGEPADPFAIGSGHVDPEKASDPGLVYDIAPGDYLNYLCSLNYSSTQIGLLSKGNFSCPSKREVVEPGDLNYPSFSVIMKAKNVSVTLKRTVTNVGYPMSDYSVQINNPKGVEMIVKPKRLSFERSGEKLSYKVSFVALEEAEDLGEFSFGSVVWVSGKYRVRSPVAGEGYEECNKDNWFGDFARVCSHTMGFREVCLFLSIFLATSAAAVDQQSYIIHMDTTKMAAPSPEQWYTALIDSINKISSLDDQEEASSAAQILYVYKTAISGFAAKLSTKKLHSLSKTPGFLAATPNELLQLHTTHSPQFLGLQREHGLWNSSNLASDIVIGLLDTGIWPEHISFQDKGLPPVPKKWKGTCQAGQKFSPSNCNRKLIGATAYIKGYEAIVGRLNATGTFRSPRDSDGHGTHTASTAAGNIVNKASFFNQAMGVATGMRFTSRIAAYKVCWTEGCANADILAAIDRAVADGVDVLSLSLGGSASAFYKDDIAIATFGAVRNGVFVSCSAGNSGPSSSTVSNIAPWIMTVAASYTDRTFPATVKLGNGQVFEGSSLYSGNSIGQLPLVYNNTAGGEEANVCTAGSLVPSLVKGKIVVCERGTNSRTAKGEQVKLAGGAGMILINTQLEGEELFADPHVLPAANLGASAGQAIIRYISSSKHQPKALIAFEGTKFGNRAPRVAAFSSRGPSLIAPDVIKPDVTAPGVNILAAWPLIASPSELESDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYTNDNRMSPISDVGSESGKPANPFAFGSGHVDPEKASDPGLIYDITPQDYLNYFCSLNYNSTQIGLVSRGNFTCPSKRRVGQPGNLNYPSFSVFMKKKAKNVSVTLKRTVTNVGRPRSDYTVKIKNPKGIGIRVEPEKLSFRRYGQKLSYQVSFVALGKREGLGGFSFGSLVWVSGKYGVRSPIAVTWK | 1536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 233078 | 239675 | + | CmaCh04G000460.1 | Cma04g00046 | 291127 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00046 | 1536 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 531 | 541 | IPR023828 | - | |
Cma04g00046 | 1536 | Pfam | Peptidase inhibitor I9 | 13 | 100 | IPR010259 | - | |
Cma04g00046 | 1536 | Pfam | Peptidase inhibitor I9 | 797 | 882 | IPR010259 | - | |
Cma04g00046 | 1536 | Pfam | Subtilase family | 124 | 573 | IPR000209 | GO:0006508|GO:0008236 | |
Cma04g00046 | 1536 | Pfam | PA domain | 1142 | 1229 | IPR003137 | - | |
Cma04g00046 | 1536 | Pfam | PA domain | 361 | 446 | IPR003137 | - | |
Cma04g00046 | 1536 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.1 | 8 | 749 | - | - | |
Cma04g00046 | 1536 | CDD | Peptidases_S8_3 | 97 | 567 | IPR034197 | - | |
Cma04g00046 | 1536 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 1312 | 1322 | IPR023828 | - | |
Cma04g00046 | 1536 | CDD | PA_subtilisin_like | 338 | 463 | - | - | |
Cma04g00046 | 1536 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 889 | 1384 | - | - | |
Cma04g00046 | 1536 | CDD | PA_subtilisin_like | 1119 | 1237 | - | - | |
Cma04g00046 | 1536 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 2 | 100 | IPR037045 | - | |
Cma04g00046 | 1536 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 785 | 882 | IPR037045 | - | |
Cma04g00046 | 1536 | Gene3D | - | 332 | 470 | - | - | |
Cma04g00046 | 1536 | Gene3D | - | 1113 | 1251 | - | - | |
Cma04g00046 | 1536 | SUPERFAMILY | Subtilisin-like | 881 | 1388 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00046 | 1536 | Gene3D | - | 620 | 751 | - | - | |
Cma04g00046 | 1536 | Gene3D | - | 1401 | 1535 | - | - | |
Cma04g00046 | 1536 | PRINTS | Subtilisin serine protease family (S8) signature | 201 | 214 | IPR015500 | - | |
Cma04g00046 | 1536 | PRINTS | Subtilisin serine protease family (S8) signature | 530 | 546 | IPR015500 | - | |
Cma04g00046 | 1536 | PRINTS | Subtilisin serine protease family (S8) signature | 123 | 142 | IPR015500 | - | |
Cma04g00046 | 1536 | SUPERFAMILY | PA domain | 346 | 426 | IPR046450 | - | |
Cma04g00046 | 1536 | Pfam | Fibronectin type-III domain | 1432 | 1533 | IPR041469 | - | |
Cma04g00046 | 1536 | Pfam | Fibronectin type-III domain | 651 | 749 | IPR041469 | - | |
Cma04g00046 | 1536 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 107 | 603 | - | - | |
Cma04g00046 | 1536 | Gene3D | Peptidase S8/S53 domain | 125 | 616 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00046 | 1536 | CDD | Peptidases_S8_3 | 879 | 1348 | IPR034197 | - | |
Cma04g00046 | 1536 | Gene3D | Peptidase S8/S53 domain | 907 | 1397 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00046 | 1536 | Pfam | Subtilase family | 906 | 1374 | IPR000209 | GO:0006508|GO:0008236 | |
Cma04g00046 | 1536 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 788 | 1536 | IPR045051 | - | |
Cma04g00046 | 1536 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 8 | 749 | IPR045051 | - | |
Cma04g00046 | 1536 | SUPERFAMILY | Subtilisin-like | 99 | 607 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00046 | 1536 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.1 | 788 | 1536 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g01716 | Cma-Chr2:9666342 | Cma04g00046 | Cma-Chr4:233078 | 0 | dispersed | |
Cma04g00046 | Cma-Chr4:233078 | Cma06g00693 | Cma-Chr6:3478009 | 4.42E-171 | dispersed | |
Cma19g00117 | Cma-Chr19:695950 | Cma04g00046 | Cma-Chr4:233078 | 0 | dispersed | |
Cma04g00046 | Cma-Chr4:233078 | Cma04g00047 | Cma-Chr4:240822 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00046 | - | - | cmax:111487664 | 1483.39 |