Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00047 | ATGAAACACACTTTAATTATAACAAGTTGCGACTTTAGAGAAGAGGGCAAAGCATCCAATGGAAGTGGAAAGTTGACCAAAATGTATGGAATTGAAGAAAGGAGATCCCCTTCTTCCCCATTTATATATTCGTCTCCTTCGCAATTGCAGCCTCTGCCTGGATCAGGCAATGTTTTTGGTGAAATCTTCAAGCGTGCCAGACTAAAGAGACTTACTCATCCACGCAATGGGCATTACGGAACTCTGGCTGCTGCTGTTGTCAATAATGCTTGCAACTTCAGCTGCTGCTGTGGATCAACAGACCTACATAATTCACATGGACGCCACAAAGATGGCCACCACCAACCCCGAACAATGGACAAGGGTCTGCCCCCAGTGCCTAAAAAATGGAAAGGCACCTGTCAAGCAGGCCCCAAGTTCTCACGTTCAAATTGCAATAAGAAACTCGTTGGCGCAAGAGCCTACATCAAAGGCTATGAGACCATCCTCGGTCGATTGAACACGACCGGGACGTTTCGGTCGGCTCGAGACTCGGACGGGCATGGCACCCACACCGCATCCACTGCTGCTGGGAACATTGTGTACAAAGCAAGCCTTTATAACCAAGGCATGGGGGCAGCCACTGGAATGAGGTTCACTTCAAGGATTGCAGCATATAAAGTATGCTGGCCGGAGGGGTGCGCCAGCACCGATATTTTGGCAGCCATAGACCGCGCTGTCGTCGATGGAGTCGATGTTCTGTCGCTTTCGTTAGGCGGCGGTGATGGTTTTTTTTACCAAGATGAAATAGCCATAGCTGCATTTGGTGCTGTTCGAAATGGGGTTTTTGTGTCATGCTCAGCTGGAAATTCTGGCCCATTTATGTCGACTGTTGGTAATGTAGCGCCATGGATCATGACAGTCGCTGCAAGCTACACTGACAGAACCTTCCCAGGCTCTGTAAAACTTGGAAATGGCCAAATATTTGAAGGCTCTTCTTTGCATTCTGGGAACAGCATAGGTGAACTCCCACTTGTTTATAACAAAACTGCGGGTGGAGAAGAAGCAAGTGTTTGTACAGCTGGTTCGCTGGTCCCATCAATGGTGAAGGGCAAAATTGTGGTATGTGAAAGAGGCACAAACTCGAGGTTTGAAAAAGGAGAGCAAGTAAAGTTAGCAGGCGGAGTTGGAATGATTCTGATCAACACACAACTTGAAGGTGAAGAGCTTTTTGGTGACTCTCATGTTTTACCTGCCATTAATCTTGGAGCTTCAGCTGGCAAAGCCATCATAAACTATATAGCTTCCTCGAAACACCCACCGAAAGCTTCAATCCTGTTTGAAGGGACCAGATATGGGAGTCGAGCACCCAGAATGGCTGCCTTTTCTTCTAGAGGACCCAGCTTCTTCGAGCCGTACGTGATAAAGCCAGACATAACTGCCCCTGGGGTTAACATATTAGCTGCTTGGCCACCCGTTGTGAGCCCAAGTGAGCTCAAGTCTGATAAAAGAAGAGTGCTGTTCAATATAATTTCGGGAACTTCTATGTCCTGTCCCCATGTTAGCGGCATAGCTGCATTACTTAAATCAGCTCACAAGAATTGGTCGCCTGCCGCTATCAAATCTGCACTTATGACCACAGCTTACGTTAATGACAACAAAAGGAGTCTCATTTCCGACGTGGGTCGCCCTAGCGGTGGACCTGCAGATCCTTACGCGTTCGGTTCTGGGCATGTGGATCCCGAGAAAGCTGTGGACCCGGGATTGGTCTACGATATCGTGCCACAAGACTACCTAAACTACTTGTGTAGCTTGAACTACACGTCAAAACAAGTTGGTTTAGTTTCAAGAGGGAATTTCAGTTGTCCATCAAAAAGAACTGTTCTTCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTTTCCATGAAGAACAAGGCCAAGAATGTTAGATTCAAGAGAACCGTCACAAATGTCGGTACCCCAAGCAGCGATTACACTGTCAAAATCAACAATCCCAGTGGAATAAGAGTCAGTGTGAAGCCTGAGAAGCTAAGTTTTAGGAGATCCGGACAGAAGCTGAGCTACCAAGTGAGTTTTGTTGCATTGGGTAAAAGAGAGGGTTTGAGTGACTTTTCTTTTGGGTCTCTTGTTTGGGTGTCAGGAAAGTATAGTGTGAGAAGTCCTATAGCAGTAAACTGGGAGTAG | 2187 | 47.01 | MKHTLIITSCDFREEGKASNGSGKLTKMYGIEERRSPSSPFIYSSPSQLQPLPGSGNVFGEIFKRARLKRLTHPRNGHYGTLAAAVVNNACNFSCCCGSTDLHNSHGRHKDGHHQPRTMDKGLPPVPKKWKGTCQAGPKFSRSNCNKKLVGARAYIKGYETILGRLNTTGTFRSARDSDGHGTHTASTAAGNIVYKASLYNQGMGAATGMRFTSRIAAYKVCWPEGCASTDILAAIDRAVVDGVDVLSLSLGGGDGFFYQDEIAIAAFGAVRNGVFVSCSAGNSGPFMSTVGNVAPWIMTVAASYTDRTFPGSVKLGNGQIFEGSSLHSGNSIGELPLVYNKTAGGEEASVCTAGSLVPSMVKGKIVVCERGTNSRFEKGEQVKLAGGVGMILINTQLEGEELFGDSHVLPAINLGASAGKAIINYIASSKHPPKASILFEGTRYGSRAPRMAAFSSRGPSFFEPYVIKPDITAPGVNILAAWPPVVSPSELKSDKRRVLFNIISGTSMSCPHVSGIAALLKSAHKNWSPAAIKSALMTTAYVNDNKRSLISDVGRPSGGPADPYAFGSGHVDPEKAVDPGLVYDIVPQDYLNYLCSLNYTSKQVGLVSRGNFSCPSKRTVLQPGDLNYPSFSVSMKNKAKNVRFKRTVTNVGTPSSDYTVKINNPSGIRVSVKPEKLSFRRSGQKLSYQVSFVALGKREGLSDFSFGSLVWVSGKYSVRSPIAVNWE | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 240822 | 244052 | + | CmaCh04G000470.1 | Cma04g00047 | 291128 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00047 | 728 | Pfam | PA domain | 337 | 423 | IPR003137 | - | |
Cma04g00047 | 728 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 119 | 728 | IPR045051 | - | |
Cma04g00047 | 728 | Pfam | Subtilase family | 158 | 547 | IPR000209 | GO:0006508|GO:0008236 | |
Cma04g00047 | 728 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 578 | - | - | |
Cma04g00047 | 728 | CDD | Peptidases_S8_3 | 120 | 542 | IPR034197 | - | |
Cma04g00047 | 728 | PRINTS | Subtilisin serine protease family (S8) signature | 505 | 521 | IPR015500 | - | |
Cma04g00047 | 728 | PRINTS | Subtilisin serine protease family (S8) signature | 177 | 190 | IPR015500 | - | |
Cma04g00047 | 728 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 506 | 516 | IPR023828 | - | |
Cma04g00047 | 728 | Gene3D | - | 595 | 727 | - | - | |
Cma04g00047 | 728 | SUPERFAMILY | Subtilisin-like | 144 | 582 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00047 | 728 | Gene3D | - | 307 | 445 | - | - | |
Cma04g00047 | 728 | Pfam | Fibronectin type-III domain | 626 | 725 | IPR041469 | - | |
Cma04g00047 | 728 | Gene3D | Peptidase S8/S53 domain | 117 | 591 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g00047 | 728 | CDD | PA_subtilisin_like | 313 | 438 | - | - | |
Cma04g00047 | 728 | MobiDBLite | consensus disorder prediction | 105 | 126 | - | - | |
Cma04g00047 | 728 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.1 | 119 | 728 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00047 | Cma-Chr4:240822 | Cma10g00769 | Cma-Chr10:3535963 | 0 | dispersed | |
Cma04g00046 | Cma-Chr4:233078 | Cma04g00047 | Cma-Chr4:240822 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00047 | - | - | csv:101222234 | 952.584 |