Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00072 | ATGGCTGAACTCTCGAATCTCTCCTCGAGCCCCAGTGAAGAAAGCGAGAACTTGCTGCAGAAACACGTGGCGTTCTTCGATAGGAACCATGACGGCGTCGTTTATCCATGGGAAACCTTCAAAGGCTTCCGAGCGATCGGGGCGGGTTTGTTTCTGTCCTCCGTCAGTGCTGTTTTTATTAACATCGGACTCAGCTCCAAAACCCGACCCGGGAAATGCCCCAACTTTTTATTCCCAATTGTGATAAAGAACATTCATCTCGCCAAACATGGAAGCGATTCTGGTGTATATGATTACGAGGGAAGGTTCGTTGCATTAAAGTTTGAAGAAATTTTTAAAAAGCATGCACTAACGTATCCGGATGCCTTAACTGAAAAAGAGCTTAAAGCGATGCTGAGAGCAAATAGAGAGCCGAAGGACTATAAGGGATGGCTGGGTGCATGGGCAGAGTGGACAGCTCTATACATCCTTTGCAAAGATGAGAATGGATTGCTTACAAAGCAAACGGTGAAGGGTGTTTACGATGGAAGCTTATTCCAACATATGGAGAAAGACAGAGCATCAAAGAAGAAGAAATGA | 579 | 45.25 | MAELSNLSSSPSEESENLLQKHVAFFDRNHDGVVYPWETFKGFRAIGAGLFLSSVSAVFINIGLSSKTRPGKCPNFLFPIVIKNIHLAKHGSDSGVYDYEGRFVALKFEEIFKKHALTYPDALTEKELKAMLRANREPKDYKGWLGAWAEWTALYILCKDENGLLTKQTVKGVYDGSLFQHMEKDRASKKKK | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 344698 | 346335 | - | CmaCh04G000720.1 | Cma04g00072 | 291153 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00072 | 192 | PANTHER | PEROXYGENASE 3-RELATED | 11 | 192 | IPR007736 | - | |
Cma04g00072 | 192 | Pfam | Caleosin related protein | 16 | 182 | IPR007736 | - | |
Cma04g00072 | 192 | PANTHER | INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED | 11 | 192 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01019 | Cma04g00072 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00072 | Cma-Chr4:344698 | Cma17g00144 | Cma-Chr17:717986 | 9.11E-59 | dispersed | |
Cma05g00771 | Cma-Chr5:4545686 | Cma04g00072 | Cma-Chr4:344698 | 5.96E-54 | transposed | |
Cma04g00072 | Cma-Chr4:344698 | Cma04g01019 | Cma-Chr4:5286199 | 1.69E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00072 | K17991 | - | csv:101213829 | 314.309 |