Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00072 ATGGCTGAACTCTCGAATCTCTCCTCGAGCCCCAGTGAAGAAAGCGAGAACTTGCTGCAGAAACACGTGGCGTTCTTCGATAGGAACCATGACGGCGTCGTTTATCCATGGGAAACCTTCAAAGGCTTCCGAGCGATCGGGGCGGGTTTGTTTCTGTCCTCCGTCAGTGCTGTTTTTATTAACATCGGACTCAGCTCCAAAACCCGACCCGGGAAATGCCCCAACTTTTTATTCCCAATTGTGATAAAGAACATTCATCTCGCCAAACATGGAAGCGATTCTGGTGTATATGATTACGAGGGAAGGTTCGTTGCATTAAAGTTTGAAGAAATTTTTAAAAAGCATGCACTAACGTATCCGGATGCCTTAACTGAAAAAGAGCTTAAAGCGATGCTGAGAGCAAATAGAGAGCCGAAGGACTATAAGGGATGGCTGGGTGCATGGGCAGAGTGGACAGCTCTATACATCCTTTGCAAAGATGAGAATGGATTGCTTACAAAGCAAACGGTGAAGGGTGTTTACGATGGAAGCTTATTCCAACATATGGAGAAAGACAGAGCATCAAAGAAGAAGAAATGA 579 45.25 MAELSNLSSSPSEESENLLQKHVAFFDRNHDGVVYPWETFKGFRAIGAGLFLSSVSAVFINIGLSSKTRPGKCPNFLFPIVIKNIHLAKHGSDSGVYDYEGRFVALKFEEIFKKHALTYPDALTEKELKAMLRANREPKDYKGWLGAWAEWTALYILCKDENGLLTKQTVKGVYDGSLFQHMEKDRASKKKK 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 344698 346335 - CmaCh04G000720.1 Cma04g00072 291153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00072 192 PANTHER PEROXYGENASE 3-RELATED 11 192 IPR007736 -
Cma04g00072 192 Pfam Caleosin related protein 16 182 IPR007736 -
Cma04g00072 192 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 11 192 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01019 Cma04g00072 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00072 Cma-Chr4:344698 Cma17g00144 Cma-Chr17:717986 9.11E-59 dispersed
Cma05g00771 Cma-Chr5:4545686 Cma04g00072 Cma-Chr4:344698 5.96E-54 transposed
Cma04g00072 Cma-Chr4:344698 Cma04g01019 Cma-Chr4:5286199 1.69E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00072 K17991 - csv:101213829 314.309