Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cma04g00086	ATGGTTTCCAGGTCGTATTCCAATTTACTCGAACTTGCCACCGGAGAATCGCCGTCTTTCGGCCGTATAAACCGCCAAATCCCCCGGATTGTGACCGTCGCCGGCTTAATCTCCGACGTCGATGACGACCCATCTGAGAGCGTCTCCTCGGAGCCGTCCTCCTCCTCCACCTCTCGCGACCGGATTATCATCGTCGCCAATGAGCTTCCCATCAGAGCTCACCGGATATCCGGCAACGGCGGAGCCACCACCAACTGGAATTTCAGCTGGGATGAAAATTCCCTTCTCCTCCAGCTGAAAGATGGGCTGGGAGATGATGATTTTGAAGTGTTTTATGTGGGTTGTCTTAAGGAAGATATTCACCCAAATGAACAAGATGAAGTCTCTCAAATACTTCTAGAGACTTTCAAATGCGTGCCAACATTTCTCACTCAAGATCTTTACACAAGGTACTACCATGGCTTCTGCAAGCAGCAGCTATGGCCTCTGTTTCATTACATGTTGCCTCTTTCGCCTGACCTCGGCGGTCGATTCAATCGACCACTATGGCAGGCTTATGTTAAAGTTAATAAAATCTTTGCTGATAAGATCATGGAAGTGATCAATCCTGAAGACGATTTTGTTTGGATTCATGATTATCATCTTATGGTACTGCCTACTTTTTTGAGGAAGAGATTCAATAGGGTTAAGCTTGGATTCTTTTTGCATAGCCCTTTCCCATCGTCGGAGATATATAGAACACTTCCGATCCGGGAAGAGCTCTTACGAGCACTTCTGAATTCAGATTTGATAGGGTTTCATACTTTTGATTATGCTAGGCATTTTCTTTCTTGTTGTAGTCGAATGTTCGGTCTAACGTATGAGTCGAAACGGGGTTATATCGGGATAGAGTATTATGGTCGAACTATTAGTATTAAGATCCTTCCTGTTGGGATTCATATGGGTCAGCTTCAATCTGTTTTGAGTCTTGGGAAGACTGAGGAGAAGGTTAGTGAGGTTATTAAGCAGTTTCGTGATCGGGATCGGATCATGTTGCTCGGTGTGGACGATATGGACATATTTAAGGGGATAAGTTTGAAGCTTTTGGCTATGGAGCAGTTGTTGATGACGCACCCTGAGTGGGAGGGGAAGGTTGTGTTGGTGCAGATTGCCAACCCTGCAAGAGGTAGAGGGAAAGATGTTAAGGAAGTTCGGGACGAGATGAAGGCAACTGTTAGGCGGATAAACAATATGTTTGGGAGACCTGGGTACGAGCCAATTGTGTTGATTGAGGAACCACTCAAATTCTACGAGAGAATTGCATATTATACGGTTGCTGAATGTTGTTTGGTCACAGCGGTTAGGGACGGTATGAATCTCATTCCATACGAGTACATTGTCAGTCGTCAAGGGAACGATAAGTTGGATAAACTCTTGGGCTGGGAATCATCAGCTCCGAAGAAGAGTATGTTGGTTCTATCCGAATTCATCGGGTGCTCTCCATCCTTAAGTGGAGCGATTCGAGTTAATCCCTGGAATATCGATGCTGTAGCTGATGCCATGGAATGTGCGTTGGAGATGGCAGATGCAGAGAAGCAGCTCCGCCATGAGAAGCATTTTAGATATGTGAGCACACACGATGTCGGGTATTGGGCTCGGAGTTTCCTACAAGATTTGGAGAGGACTTGTAGGGATCATGTGAGGCAGAGATGTTGGGGTATCGGGTTCGGTTTAAGTTTTAGAGTTGTGGCCCTTGATCTGAACTTCAGGAAGCTCGCTATGGAACACATAATTTCAACTTATAAGAGGACGAAGTCTCGGGCTATTCTTTTGGACTACGATGGTACGTTAATGCCTCAAGCTTCAATTGACAAGGGCCCTACTTCAAAATGCCTCGAAACTCTTGATACCTTGTGTCGGGATAAGAAAAATACGGTGTTCATTGTGAGTGCAAAAACTCGAAAAACACTTGCTGAATGGTTTGCCCCTTGCAAAAAACTCAGCATTGCTGCCGAGCACGGATACTTTATTAGGCTAAAGCAGGATGAGGAATGGGAAACCAGTTTGCCAGTTGCAGATTGCTGTTGGAAGCAGATTGTGCAGCCAGTGATGAAACTCTACACTGAAACGACCGATGGATCGACAATCGAAGATCGAGAAACCGCACTCGGATGGTGTTATGAAGATGCAGATCCAGATTTCGGTTCGTGTCAAGCTAAGGAGCTCCTGGATCATCTCGAAAGCGTACTAGCCAACGAGCCAGTTACCGTAAAAAGTGGTCAAAGCATTGTGGAAGTTAAACCACAGGGCGTCAGCAAGGGTCTCGTGGCGAAACGACTACTCTCTGCAATGCAAGAGAAGGGGACCCCAGCAGATTTTGTTCTCTGCATTGGCGACGACCGATCGGATGAAGACATGTTCAAGGTGATCTCAAGTTCCATGGCAGGTCCATCGATTGCACCCCGAGCTGAAATTTTTGCTTGTACAGTAGGGAAGAAACCGAGCAAAGCCAAGTATTACCTCGACGATCCATCGGAAATTGCTAGGCTGATGCATGGTTTGGCTTCGGTGTCGAGGCCAAACGTTCCGCCTTATCCATCCCAAAGCTGA	2589	46.35	MVSRSYSNLLELATGESPSFGRINRQIPRIVTVAGLISDVDDDPSESVSSEPSSSSTSRDRIIIVANELPIRAHRISGNGGATTNWNFSWDENSLLLQLKDGLGDDDFEVFYVGCLKEDIHPNEQDEVSQILLETFKCVPTFLTQDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRPLWQAYVKVNKIFADKIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMFGLTYESKRGYIGIEYYGRTISIKILPVGIHMGQLQSVLSLGKTEEKVSEVIKQFRDRDRIMLLGVDDMDIFKGISLKLLAMEQLLMTHPEWEGKVVLVQIANPARGRGKDVKEVRDEMKATVRRINNMFGRPGYEPIVLIEEPLKFYERIAYYTVAECCLVTAVRDGMNLIPYEYIVSRQGNDKLDKLLGWESSAPKKSMLVLSEFIGCSPSLSGAIRVNPWNIDAVADAMECALEMADAEKQLRHEKHFRYVSTHDVGYWARSFLQDLERTCRDHVRQRCWGIGFGLSFRVVALDLNFRKLAMEHIISTYKRTKSRAILLDYDGTLMPQASIDKGPTSKCLETLDTLCRDKKNTVFIVSAKTRKTLAEWFAPCKKLSIAAEHGYFIRLKQDEEWETSLPVADCCWKQIVQPVMKLYTETTDGSTIEDRETALGWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQSIVEVKPQGVSKGLVAKRLLSAMQEKGTPADFVLCIGDDRSDEDMFKVISSSMAGPSIAPRAEIFACTVGKKPSKAKYYLDDPSEIARLMHGLASVSRPNVPPYPSQS	862

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
4	429400	433173	+	CmaCh04G000860.1	Cma04g00086	291167

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cma04g00086	862	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	602	803	IPR006379	-
Cma04g00086	862	Gene3D	Glycogen Phosphorylase B;	53	318	-	-
Cma04g00086	862	Gene3D	-	729	855	IPR023214	-
Cma04g00086	862	Gene3D	-	599	716	IPR023214	-
Cma04g00086	862	Pfam	Glycosyltransferase family 20	61	553	IPR001830	GO:0003824\|GO:0005992
Cma04g00086	862	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	852	-	-
Cma04g00086	862	Pfam	Trehalose-phosphatase	603	838	IPR003337	GO:0003824\|GO:0005992
Cma04g00086	862	SUPERFAMILY	HAD-like	600	845	IPR036412	-
Cma04g00086	862	CDD	GT20_TPS	61	553	IPR001830	GO:0003824\|GO:0005992
Cma04g00086	862	TIGRFAM	T6PP: trehalose-phosphatase	598	847	IPR003337	GO:0003824\|GO:0005992
Cma04g00086	862	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	60	556	-	-
Cma04g00086	862	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	852	IPR001830	GO:0003824\|GO:0005992
Cma04g00086	862	Gene3D	Glycogen Phosphorylase B;	319	537	-	-
Cma04g00086	862	CDD	HAD_TPP	601	839	-	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cma04g00086	K16055	TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	-	vvi:100252552	1454.11

WGDs- Genes

Select	Gene_1	Gene_2	Event_name
	Cma04g01042	Cma04g00086	CST

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cma03g01336	Cma-Chr3:8580070	Cma04g00086	Cma-Chr4:429400	0	dispersed
Cma04g00086	Cma-Chr4:429400	Cma19g01006	Cma-Chr19:8674708	0	dispersed
Cma18g00443	Cma-Chr18:2444622	Cma04g00086	Cma-Chr4:429400	3.27E-140	dispersed
Cma06g00646	Cma-Chr6:3189733	Cma04g00086	Cma-Chr4:429400	0	transposed
Cma16g01174	Cma-Chr16:8986427	Cma04g00086	Cma-Chr4:429400	0	transposed
Cma04g00086	Cma-Chr4:429400	Cma04g01042	Cma-Chr4:5399688	0	wgd

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi1g516	.	.	.	.	.	.	.	Bma15g00272	Cmo04g01112	.	Cma04g01042	Cma04g00086	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cone8ag0594	.	.	.	.	.	.	.	.	Blo11g00904	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cma02g00911	.	48	598	Trehalose Biosynthesis Gene Families	AT4G24040	57.5	1.6e-191	666.8
Cma19g01006	CST	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	77.8	0.0e+00	1372.8
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G06410	77.6	0.0e+00	1365.9
Cma07g00170	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G06410	75.5	0.0e+00	1350.1
Cma03g01336	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G06410	75.4	0.0e+00	1350.1
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G06410	64.9	0.0e+00	1144.0
Cma06g00646	.	1	830	Trehalose Biosynthesis Gene Families	AT1G06410	65.7	0.0e+00	1119.4
Cma16g01174	.	1	826	Trehalose Biosynthesis Gene Families	AT1G06410	65.7	0.0e+00	1113.6
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	63.5	0.0e+00	1109.0
Cma04g01714	.	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	62.9	0.0e+00	1094.7
Cma10g00135	CST	1	837	Trehalose Biosynthesis Gene Families	AT1G06410	59.2	5.6e-301	1030.8
Cma11g00105	CST	1	827	Trehalose Biosynthesis Gene Families	AT1G06410	59.2	6.8e-299	1023.8
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G06410	64.8	2.7e-263	905.6
Cma01g01269	.	85	696	Trehalose Biosynthesis Gene Families	AT1G16980	64.6	7.8e-242	833.9
Cma18g00443	.	83	691	Trehalose Biosynthesis Gene Families	AT1G16980	64.3	3.9e-241	831.6
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G23870	74.4	0.0e+00	1356.3
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G23870	73.8	0.0e+00	1335.9
Cma10g00135	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G23870	67.1	0.0e+00	1218.0
Cma11g00105	CST	1	828	Trehalose Biosynthesis Gene Families	AT1G23870	65.6	0.0e+00	1173.7
Cma04g00086	CST	1	862	Trehalose Biosynthesis Gene Families	AT1G23870	61.6	0.0e+00	1110.5
Cma07g00170	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	0.0e+00	1105.1
Cma03g01336	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	0.0e+00	1101.7
Cma19g01006	CST	1	858	Trehalose Biosynthesis Gene Families	AT1G23870	59.8	0.0e+00	1092.8
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G23870	59.8	0.0e+00	1085.5
Cma06g00646	.	1	828	Trehalose Biosynthesis Gene Families	AT1G23870	61.8	2.2e-313	1072.0
Cma16g01174	.	1	825	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	1.2e-311	1066.2
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G23870	63.4	1.4e-259	893.3
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G60140	73.5	0.0e+00	1344.7
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G60140	72.1	0.0e+00	1320.8
Cma10g00135	CST	1	848	Trehalose Biosynthesis Gene Families	AT1G60140	66.4	0.0e+00	1205.3
Cma11g00105	CST	1	832	Trehalose Biosynthesis Gene Families	AT1G60140	65.1	0.0e+00	1172.9
Cma04g00086	CST	1	860	Trehalose Biosynthesis Gene Families	AT1G60140	61.1	0.0e+00	1080.9
Cma03g01336	CST	1	850	Trehalose Biosynthesis Gene Families	AT1G60140	60.7	0.0e+00	1080.1
Cma07g00170	CST	1	850	Trehalose Biosynthesis Gene Families	AT1G60140	60.1	0.0e+00	1077.8
Cma19g01006	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G60140	59.5	2.3e-310	1062.0
Cma11g01907	CST	1	844	Trehalose Biosynthesis Gene Families	AT1G60140	58.9	3.7e-308	1054.7
Cma06g00646	.	1	827	Trehalose Biosynthesis Gene Families	AT1G60140	59.4	2.2e-305	1045.4
Cma16g01174	.	1	830	Trehalose Biosynthesis Gene Families	AT1G60140	58.5	3.8e-305	1044.6
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G60140	61.5	5.6e-248	854.7
Cma04g00086	CST	1	856	Trehalose Biosynthesis Gene Families	AT1G68020	78.8	0.0e+00	1401.3
Cma06g00646	.	1	841	Trehalose Biosynthesis Gene Families	AT1G68020	69.9	0.0e+00	1228.8
Cma16g01174	.	1	827	Trehalose Biosynthesis Gene Families	AT1G68020	69.7	0.0e+00	1213.0
Cma07g00170	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G68020	63.5	0.0e+00	1153.7
Cma03g01336	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G68020	63.7	0.0e+00	1151.0
Cma19g01006	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G68020	63.5	0.0e+00	1144.0
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT1G68020	64.1	0.0e+00	1126.3
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G68020	62.6	0.0e+00	1123.6
Cma04g01714	.	1	840	Trehalose Biosynthesis Gene Families	AT1G68020	63.8	0.0e+00	1115.1
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G68020	79.3	0.0e+00	1106.7
Cma10g00135	CST	1	837	Trehalose Biosynthesis Gene Families	AT1G68020	61.7	0.0e+00	1079.7
Cma11g00105	CST	1	827	Trehalose Biosynthesis Gene Families	AT1G68020	60.7	4.2e-312	1067.8
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G70290	68.6	0.0e+00	1203.7
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G70290	67.6	0.0e+00	1187.9
Cma10g00135	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G70290	63.7	0.0e+00	1105.9
Cma11g00105	CST	1	828	Trehalose Biosynthesis Gene Families	AT1G70290	62.8	0.0e+00	1075.8
Cma07g00170	CST	1	849	Trehalose Biosynthesis Gene Families	AT1G70290	57.5	4.9e-294	1007.7
Cma03g01336	CST	1	849	Trehalose Biosynthesis Gene Families	AT1G70290	57.2	1.2e-292	1003.0
Cma11g01907	CST	1	848	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	3.9e-291	998.0
Cma19g01006	CST	1	852	Trehalose Biosynthesis Gene Families	AT1G70290	57.3	1.2e-289	993.0
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	2.8e-289	991.9
Cma06g00646	.	1	825	Trehalose Biosynthesis Gene Families	AT1G70290	56.4	3.9e-275	944.9
Cma16g01174	.	1	825	Trehalose Biosynthesis Gene Families	AT1G70290	55.8	4.0e-272	934.9
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	6.9e-224	774.6
Cma01g01269	.	1	926	Trehalose Biosynthesis Gene Families	AT1G78580	77.9	0.0e+00	1464.5
Cma18g00443	.	1	920	Trehalose Biosynthesis Gene Families	AT1G78580	73.1	0.0e+00	1350.9
Cma04g00288	.	33	842	Trehalose Biosynthesis Gene Families	AT2G18700	61.2	1.6e-308	1055.8
Cma04g01714	.	33	842	Trehalose Biosynthesis Gene Families	AT2G18700	60.7	1.3e-305	1046.2
Cma10g00135	CST	10	839	Trehalose Biosynthesis Gene Families	AT2G18700	59.3	5.9e-298	1020.8
Cma07g00170	CST	1	842	Trehalose Biosynthesis Gene Families	AT2G18700	58.7	3.8e-297	1018.1
Cma03g01336	CST	1	842	Trehalose Biosynthesis Gene Families	AT2G18700	58.5	2.5e-296	1015.4
Cma11g00105	CST	11	829	Trehalose Biosynthesis Gene Families	AT2G18700	59.2	2.2e-292	1002.3
Cma19g01006	CST	24	842	Trehalose Biosynthesis Gene Families	AT2G18700	57.7	5.9e-290	994.2
Cma11g01907	CST	56	840	Trehalose Biosynthesis Gene Families	AT2G18700	59.0	5.5e-288	987.6
Cma16g01174	.	1	826	Trehalose Biosynthesis Gene Families	AT2G18700	57.9	1.0e-286	983.4
Cma06g00646	.	1	828	Trehalose Biosynthesis Gene Families	AT2G18700	57.6	2.3e-286	982.2
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT2G18700	57.4	4.4e-285	978.0
Cma04g01042	CST	29	666	Trehalose Biosynthesis Gene Families	AT2G18700	58.3	7.1e-227	784.6
Cma06g00646	.	1	825	Trehalose Biosynthesis Gene Families	AT4G17770	78.1	0.0e+00	1339.3
Cma16g01174	.	1	821	Trehalose Biosynthesis Gene Families	AT4G17770	77.3	0.0e+00	1323.9
Cma04g00086	CST	1	849	Trehalose Biosynthesis Gene Families	AT4G17770	70.3	0.0e+00	1243.0
Cma07g00170	CST	1	838	Trehalose Biosynthesis Gene Families	AT4G17770	66.7	0.0e+00	1177.2
Cma03g01336	CST	1	838	Trehalose Biosynthesis Gene Families	AT4G17770	66.1	0.0e+00	1170.2
Cma19g01006	CST	1	850	Trehalose Biosynthesis Gene Families	AT4G17770	62.4	0.0e+00	1144.0
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT4G17770	64.0	0.0e+00	1144.0
Cma11g01907	CST	1	836	Trehalose Biosynthesis Gene Families	AT4G17770	62.7	0.0e+00	1137.9
Cma04g01714	.	1	842	Trehalose Biosynthesis Gene Families	AT4G17770	64.0	0.0e+00	1134.0
Cma10g00135	CST	1	832	Trehalose Biosynthesis Gene Families	AT4G17770	62.2	0.0e+00	1101.7
Cma11g00105	CST	1	824	Trehalose Biosynthesis Gene Families	AT4G17770	59.9	2.7e-311	1065.1
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT4G17770	71.8	2.2e-292	1002.3
Cma01g01269	.	93	923	Trehalose Biosynthesis Gene Families	AT4G27550	61.8	1.5e-300	1029.2
Cma18g00443	.	87	914	Trehalose Biosynthesis Gene Families	AT4G27550	59.6	6.3e-291	997.3
Cma01g01269	.	1	926	Trehalose Biosynthesis Gene Families	AT1G78580	77.9	0.0e+00	1464.5
Cma18g00443	.	1	920	Trehalose Biosynthesis Gene Families	AT1G78580	73.1	0.0e+00	1350.9
Cma01g01269	.	85	696	Trehalose Biosynthesis Gene Families	AT1G16980	64.6	7.8e-242	833.9
Cma18g00443	.	83	691	Trehalose Biosynthesis Gene Families	AT1G16980	64.3	3.9e-241	831.6
Cma01g01269	.	93	621	Trehalose Biosynthesis Gene Families	AT1G17000	62.0	2.2e-190	663.3
Cma18g00443	.	78	606	Trehalose Biosynthesis Gene Families	AT1G17000	60.3	1.5e-188	657.1
Cma01g01269	.	93	923	Trehalose Biosynthesis Gene Families	AT4G27550	61.8	1.5e-300	1029.2
Cma18g00443	.	87	914	Trehalose Biosynthesis Gene Families	AT4G27550	59.6	6.3e-291	997.3
Cma06g00646	.	1	825	Trehalose Biosynthesis Gene Families	AT4G17770	78.1	0.0e+00	1339.3
Cma16g01174	.	1	821	Trehalose Biosynthesis Gene Families	AT4G17770	77.3	0.0e+00	1323.9
Cma04g00086	CST	1	849	Trehalose Biosynthesis Gene Families	AT4G17770	70.3	0.0e+00	1243.0
Cma07g00170	CST	1	838	Trehalose Biosynthesis Gene Families	AT4G17770	66.7	0.0e+00	1177.2
Cma03g01336	CST	1	838	Trehalose Biosynthesis Gene Families	AT4G17770	66.1	0.0e+00	1170.2
Cma19g01006	CST	1	850	Trehalose Biosynthesis Gene Families	AT4G17770	62.4	0.0e+00	1144.0
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT4G17770	64.0	0.0e+00	1144.0
Cma11g01907	CST	1	836	Trehalose Biosynthesis Gene Families	AT4G17770	62.7	0.0e+00	1137.9
Cma04g01714	.	1	842	Trehalose Biosynthesis Gene Families	AT4G17770	64.0	0.0e+00	1134.0
Cma10g00135	CST	1	832	Trehalose Biosynthesis Gene Families	AT4G17770	62.2	0.0e+00	1101.7
Cma11g00105	CST	1	824	Trehalose Biosynthesis Gene Families	AT4G17770	59.9	2.7e-311	1065.1
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT4G17770	71.8	2.2e-292	1002.3
Cma04g00086	CST	1	856	Trehalose Biosynthesis Gene Families	AT1G68020	78.8	0.0e+00	1401.3
Cma06g00646	.	1	841	Trehalose Biosynthesis Gene Families	AT1G68020	69.9	0.0e+00	1228.8
Cma16g01174	.	1	827	Trehalose Biosynthesis Gene Families	AT1G68020	69.7	0.0e+00	1213.0
Cma07g00170	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G68020	63.5	0.0e+00	1153.7
Cma03g01336	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G68020	63.7	0.0e+00	1151.0
Cma19g01006	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G68020	63.5	0.0e+00	1144.0
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT1G68020	64.1	0.0e+00	1126.3
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G68020	62.6	0.0e+00	1123.6
Cma04g01714	.	1	840	Trehalose Biosynthesis Gene Families	AT1G68020	63.8	0.0e+00	1115.1
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G68020	79.3	0.0e+00	1106.7
Cma10g00135	CST	1	837	Trehalose Biosynthesis Gene Families	AT1G68020	61.7	0.0e+00	1079.7
Cma11g00105	CST	1	827	Trehalose Biosynthesis Gene Families	AT1G68020	60.7	4.2e-312	1067.8
Cma19g01006	CST	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	77.8	0.0e+00	1372.8
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G06410	77.6	0.0e+00	1365.9
Cma07g00170	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G06410	75.5	0.0e+00	1350.1
Cma03g01336	CST	1	845	Trehalose Biosynthesis Gene Families	AT1G06410	75.4	0.0e+00	1350.1
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G06410	64.9	0.0e+00	1144.0
Cma06g00646	.	1	830	Trehalose Biosynthesis Gene Families	AT1G06410	65.7	0.0e+00	1119.4
Cma16g01174	.	1	826	Trehalose Biosynthesis Gene Families	AT1G06410	65.7	0.0e+00	1113.6
Cma04g00288	.	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	63.5	0.0e+00	1109.0
Cma04g01714	.	1	842	Trehalose Biosynthesis Gene Families	AT1G06410	62.9	0.0e+00	1094.7
Cma10g00135	CST	1	837	Trehalose Biosynthesis Gene Families	AT1G06410	59.2	5.6e-301	1030.8
Cma11g00105	CST	1	827	Trehalose Biosynthesis Gene Families	AT1G06410	59.2	6.8e-299	1023.8
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G06410	64.8	2.7e-263	905.6
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G70290	68.6	0.0e+00	1203.7
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G70290	67.6	0.0e+00	1187.9
Cma10g00135	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G70290	63.7	0.0e+00	1105.9
Cma11g00105	CST	1	828	Trehalose Biosynthesis Gene Families	AT1G70290	62.8	0.0e+00	1075.8
Cma07g00170	CST	1	849	Trehalose Biosynthesis Gene Families	AT1G70290	57.5	4.9e-294	1007.7
Cma03g01336	CST	1	849	Trehalose Biosynthesis Gene Families	AT1G70290	57.2	1.2e-292	1003.0
Cma11g01907	CST	1	848	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	3.9e-291	998.0
Cma19g01006	CST	1	852	Trehalose Biosynthesis Gene Families	AT1G70290	57.3	1.2e-289	993.0
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	2.8e-289	991.9
Cma06g00646	.	1	825	Trehalose Biosynthesis Gene Families	AT1G70290	56.4	3.9e-275	944.9
Cma16g01174	.	1	825	Trehalose Biosynthesis Gene Families	AT1G70290	55.8	4.0e-272	934.9
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G70290	57.7	6.9e-224	774.6
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G23870	74.4	0.0e+00	1356.3
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G23870	73.8	0.0e+00	1335.9
Cma10g00135	CST	1	851	Trehalose Biosynthesis Gene Families	AT1G23870	67.1	0.0e+00	1218.0
Cma11g00105	CST	1	828	Trehalose Biosynthesis Gene Families	AT1G23870	65.6	0.0e+00	1173.7
Cma04g00086	CST	1	862	Trehalose Biosynthesis Gene Families	AT1G23870	61.6	0.0e+00	1110.5
Cma07g00170	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	0.0e+00	1105.1
Cma03g01336	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	0.0e+00	1101.7
Cma19g01006	CST	1	858	Trehalose Biosynthesis Gene Families	AT1G23870	59.8	0.0e+00	1092.8
Cma11g01907	CST	1	840	Trehalose Biosynthesis Gene Families	AT1G23870	59.8	0.0e+00	1085.5
Cma06g00646	.	1	828	Trehalose Biosynthesis Gene Families	AT1G23870	61.8	2.2e-313	1072.0
Cma16g01174	.	1	825	Trehalose Biosynthesis Gene Families	AT1G23870	61.3	1.2e-311	1066.2
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G23870	63.4	1.4e-259	893.3
Cma04g00288	.	1	860	Trehalose Biosynthesis Gene Families	AT1G60140	73.5	0.0e+00	1344.7
Cma04g01714	.	1	859	Trehalose Biosynthesis Gene Families	AT1G60140	72.1	0.0e+00	1320.8
Cma10g00135	CST	1	848	Trehalose Biosynthesis Gene Families	AT1G60140	66.4	0.0e+00	1205.3
Cma11g00105	CST	1	832	Trehalose Biosynthesis Gene Families	AT1G60140	65.1	0.0e+00	1172.9
Cma04g00086	CST	1	860	Trehalose Biosynthesis Gene Families	AT1G60140	61.1	0.0e+00	1080.9
Cma03g01336	CST	1	850	Trehalose Biosynthesis Gene Families	AT1G60140	60.7	0.0e+00	1080.1
Cma07g00170	CST	1	850	Trehalose Biosynthesis Gene Families	AT1G60140	60.1	0.0e+00	1077.8
Cma19g01006	CST	1	846	Trehalose Biosynthesis Gene Families	AT1G60140	59.5	2.3e-310	1062.0
Cma11g01907	CST	1	844	Trehalose Biosynthesis Gene Families	AT1G60140	58.9	3.7e-308	1054.7
Cma06g00646	.	1	827	Trehalose Biosynthesis Gene Families	AT1G60140	59.4	2.2e-305	1045.4
Cma16g01174	.	1	830	Trehalose Biosynthesis Gene Families	AT1G60140	58.5	3.8e-305	1044.6
Cma04g01042	CST	1	666	Trehalose Biosynthesis Gene Families	AT1G60140	61.5	5.6e-248	854.7
Cma04g00288	.	33	842	Trehalose Biosynthesis Gene Families	AT2G18700	61.2	1.6e-308	1055.8
Cma04g01714	.	33	842	Trehalose Biosynthesis Gene Families	AT2G18700	60.7	1.3e-305	1046.2
Cma10g00135	CST	10	839	Trehalose Biosynthesis Gene Families	AT2G18700	59.3	5.9e-298	1020.8
Cma07g00170	CST	1	842	Trehalose Biosynthesis Gene Families	AT2G18700	58.7	3.8e-297	1018.1
Cma03g01336	CST	1	842	Trehalose Biosynthesis Gene Families	AT2G18700	58.5	2.5e-296	1015.4
Cma11g00105	CST	11	829	Trehalose Biosynthesis Gene Families	AT2G18700	59.2	2.2e-292	1002.3
Cma19g01006	CST	24	842	Trehalose Biosynthesis Gene Families	AT2G18700	57.7	5.9e-290	994.2
Cma11g01907	CST	56	840	Trehalose Biosynthesis Gene Families	AT2G18700	59.0	5.5e-288	987.6
Cma16g01174	.	1	826	Trehalose Biosynthesis Gene Families	AT2G18700	57.9	1.0e-286	983.4
Cma06g00646	.	1	828	Trehalose Biosynthesis Gene Families	AT2G18700	57.6	2.3e-286	982.2
Cma04g00086	CST	1	851	Trehalose Biosynthesis Gene Families	AT2G18700	57.4	4.4e-285	978.0
Cma04g01042	CST	29	666	Trehalose Biosynthesis Gene Families	AT2G18700	58.3	7.1e-227	784.6
Cma02g00911	.	48	598	Trehalose Biosynthesis Gene Families	AT4G24040	57.5	1.6e-191	666.8

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0002818	2	2	2	3	2	1	1	1	1	1	1	1	3	1	1	4	1	3	4	1	1	2	2	2	2	1	2	3	4	1	56

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cma04g00086	Cma_Chr04	FPKM	22.695221	25.427841	11.584632	11.684763	10.166476	9.922056	9.538427	10.482893	11.277947	11.672033