Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00094 ATGAGCCCATTATACACATACTCGACAGGGACGAGGCAGCATCTGTACGCGAACCACGTGGATCTGGTGAAGGACTTGAGCCTCACCAACTATCTCCACTTGGGCAAGCCCTCCTACGTCACCAAGAAGCTCGCCCCAATCCTGGGCCACAGCATCGTCCGAGCCAACGGCCCCGTCTGGGCTCTGCAGCGCAAGATCATAGCGCCCGAGTTCTTCATGGACCAGGTCCGGGTCATGGCGACGCTGATGACCGAGGCGGCGGCTGCGATGCTGCAGAAATGGGAGGGGAGGATCGGCGAAGGAGAGGGAGCCACGGCGGAGATCGACGTGGATGAGGATCTTAGAGAATTCTCGGCGGATGTGATTTCTAGGGCTTGCTTTGGGAGCTCGTATGAGAAGGGGAAGCGGATTTTTTCCAAGCTTAGGGTTCTTCAGAAGCTGCTTAGCGAAGGGAATTTCCTGTTTGGCTACGTTTCTCTCAGTGACCGATTATTTCAACAAAGCAAACACAGAAGAATCAAGAAGCTGGAGAAGGAGATCGAATCATTAATCTGGGAAACAGTTCAACAACGCCAAAAAGAATGCTCCAAAACGTCGTCGGATAAGGATCTCTTGCAGCTCATAATGGAGGCCGCCATGAATGACCCAACCGTAGCGGCCAATTGTAATGAGTCCCCAAAAAAGTTCATCGTTGACAACTGCAAGAGTATCTACTTCGCCGGCCATGAGTCCACCGCCGTCGCTGCCACCTGGTCCTTGATGCTCCTCGCCCTCCACCCCGAATGGCAAGACCGTATTCGGTCTGAGTTTGGTCAAGCTTGCCTCGACGGTCGTGTCAACATGACAACCATCTCTCAACTCAAATCAGTGAGTATGGTGGTCCAAGAAACGTTGCGATTGTACCCACCGGCGGCGTTTGTGGCGAGGGAGACATTTTCAGAGACGCGACTAGGAAACGTGGTGATTCCAAAGGGTATCTACTTATGGACTTTGATTCCGACTCTGCATAGAGAGGTTGAAATATGGGGAGAAAACGCGAATGAGTTTAAGCCAGAACGGTTCGTGAATGGCATAGCCAAGGCTTGCAAGTTTCCTCAAGCGTACCTGCCATTTGGGGCAGGGCCTCGACTATGCTTAGGGAAGAACTTTGCATTGGTTCAGTTGAAGATCGTTATTTCTCTGATAGTTTCCAAGTTTAGATTCTCACTATCTCCGGAATATCGTCATTCTCCGTCTTATAGGATGATCGTAGAGCCGGCCAATGGGATGAAGATCATCTTCAAAAGGGTTTAA 1293 51.12 MSPLYTYSTGTRQHLYANHVDLVKDLSLTNYLHLGKPSYVTKKLAPILGHSIVRANGPVWALQRKIIAPEFFMDQVRVMATLMTEAAAAMLQKWEGRIGEGEGATAEIDVDEDLREFSADVISRACFGSSYEKGKRIFSKLRVLQKLLSEGNFLFGYVSLSDRLFQQSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSDKDLLQLIMEAAMNDPTVAANCNESPKKFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDRIRSEFGQACLDGRVNMTTISQLKSVSMVVQETLRLYPPAAFVARETFSETRLGNVVIPKGIYLWTLIPTLHREVEIWGENANEFKPERFVNGIAKACKFPQAYLPFGAGPRLCLGKNFALVQLKIVISLIVSKFRFSLSPEYRHSPSYRMIVEPANGMKIIFKRV 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 470113 471885 + CmaCh04G000940.1 Cma04g00094 291175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00094 430 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 425 - -
Cma04g00094 430 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Cma04g00094 430 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS E-class P450 group I signature 249 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS E-class P450 group I signature 229 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PANTHER CYTOCHROME P450 714A1-RELATED 4 425 - -
Cma04g00094 430 Pfam Cytochrome P450 3 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 SUPERFAMILY Cytochrome P450 3 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS P450 superfamily signature 292 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS P450 superfamily signature 240 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00094 430 Coils Coil 173 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00094 Cma-Chr4:470113 Cma17g00077 Cma-Chr17:381497 2.67E-142 dispersed
Cma04g01051 Cma-Chr4:5438509 Cma04g00094 Cma-Chr4:470113 6.90E-56 dispersed
Cma04g00094 Cma-Chr4:470113 Cma04g01048 Cma-Chr4:5434158 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00094 K20661 - csv:101216582 686.026