Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00094 | ATGAGCCCATTATACACATACTCGACAGGGACGAGGCAGCATCTGTACGCGAACCACGTGGATCTGGTGAAGGACTTGAGCCTCACCAACTATCTCCACTTGGGCAAGCCCTCCTACGTCACCAAGAAGCTCGCCCCAATCCTGGGCCACAGCATCGTCCGAGCCAACGGCCCCGTCTGGGCTCTGCAGCGCAAGATCATAGCGCCCGAGTTCTTCATGGACCAGGTCCGGGTCATGGCGACGCTGATGACCGAGGCGGCGGCTGCGATGCTGCAGAAATGGGAGGGGAGGATCGGCGAAGGAGAGGGAGCCACGGCGGAGATCGACGTGGATGAGGATCTTAGAGAATTCTCGGCGGATGTGATTTCTAGGGCTTGCTTTGGGAGCTCGTATGAGAAGGGGAAGCGGATTTTTTCCAAGCTTAGGGTTCTTCAGAAGCTGCTTAGCGAAGGGAATTTCCTGTTTGGCTACGTTTCTCTCAGTGACCGATTATTTCAACAAAGCAAACACAGAAGAATCAAGAAGCTGGAGAAGGAGATCGAATCATTAATCTGGGAAACAGTTCAACAACGCCAAAAAGAATGCTCCAAAACGTCGTCGGATAAGGATCTCTTGCAGCTCATAATGGAGGCCGCCATGAATGACCCAACCGTAGCGGCCAATTGTAATGAGTCCCCAAAAAAGTTCATCGTTGACAACTGCAAGAGTATCTACTTCGCCGGCCATGAGTCCACCGCCGTCGCTGCCACCTGGTCCTTGATGCTCCTCGCCCTCCACCCCGAATGGCAAGACCGTATTCGGTCTGAGTTTGGTCAAGCTTGCCTCGACGGTCGTGTCAACATGACAACCATCTCTCAACTCAAATCAGTGAGTATGGTGGTCCAAGAAACGTTGCGATTGTACCCACCGGCGGCGTTTGTGGCGAGGGAGACATTTTCAGAGACGCGACTAGGAAACGTGGTGATTCCAAAGGGTATCTACTTATGGACTTTGATTCCGACTCTGCATAGAGAGGTTGAAATATGGGGAGAAAACGCGAATGAGTTTAAGCCAGAACGGTTCGTGAATGGCATAGCCAAGGCTTGCAAGTTTCCTCAAGCGTACCTGCCATTTGGGGCAGGGCCTCGACTATGCTTAGGGAAGAACTTTGCATTGGTTCAGTTGAAGATCGTTATTTCTCTGATAGTTTCCAAGTTTAGATTCTCACTATCTCCGGAATATCGTCATTCTCCGTCTTATAGGATGATCGTAGAGCCGGCCAATGGGATGAAGATCATCTTCAAAAGGGTTTAA | 1293 | 51.12 | MSPLYTYSTGTRQHLYANHVDLVKDLSLTNYLHLGKPSYVTKKLAPILGHSIVRANGPVWALQRKIIAPEFFMDQVRVMATLMTEAAAAMLQKWEGRIGEGEGATAEIDVDEDLREFSADVISRACFGSSYEKGKRIFSKLRVLQKLLSEGNFLFGYVSLSDRLFQQSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSDKDLLQLIMEAAMNDPTVAANCNESPKKFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDRIRSEFGQACLDGRVNMTTISQLKSVSMVVQETLRLYPPAAFVARETFSETRLGNVVIPKGIYLWTLIPTLHREVEIWGENANEFKPERFVNGIAKACKFPQAYLPFGAGPRLCLGKNFALVQLKIVISLIVSKFRFSLSPEYRHSPSYRMIVEPANGMKIIFKRV | 430 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 470113 | 471885 | + | CmaCh04G000940.1 | Cma04g00094 | 291175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00094 | 430 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 4 | 425 | - | - | |
Cma04g00094 | 430 | Gene3D | Cytochrome P450 | 1 | 429 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 371 | 380 | IPR017972 | GO:0005506|GO:0016705 | |
Cma04g00094 | 430 | PRINTS | E-class P450 group I signature | 378 | 401 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | E-class P450 group I signature | 249 | 275 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | E-class P450 group I signature | 368 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | E-class P450 group I signature | 117 | 135 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | E-class P450 group I signature | 229 | 246 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PANTHER | CYTOCHROME P450 714A1-RELATED | 4 | 425 | - | - | |
Cma04g00094 | 430 | Pfam | Cytochrome P450 | 3 | 426 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | SUPERFAMILY | Cytochrome P450 | 3 | 429 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | P450 superfamily signature | 292 | 303 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | P450 superfamily signature | 240 | 257 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | PRINTS | P450 superfamily signature | 369 | 378 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g00094 | 430 | Coils | Coil | 173 | 193 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00094 | Cma-Chr4:470113 | Cma17g00077 | Cma-Chr17:381497 | 2.67E-142 | dispersed | |
Cma04g01051 | Cma-Chr4:5438509 | Cma04g00094 | Cma-Chr4:470113 | 6.90E-56 | dispersed | |
Cma04g00094 | Cma-Chr4:470113 | Cma04g01048 | Cma-Chr4:5434158 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00094 | K20661 | - | csv:101216582 | 686.026 |