Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00137 | ATGGCGGGTTTTCTTCTACTTTTCTTATTCTTGTTCACTAATTCTGTAGCCGAAGAAGTATCGTTCGGTATCAAGCAACATCTATCGACCGTTACTAGATACGGTGCTTCGAAAGGTGGTCATGATAGTAACTATGCTTCCGCGCCTGATGGATGTGTTCCTATTCATTTAAATCTTGTGGCCAGGCATGGAACTCGTGCTCCAACCAAAAAACGTATTCGAGAGTTGAACAGCTTGGAAAGTCAATTGGAGATGCTTATAAGAGAGGCAGTAGAAAATGGGTTGTCTCTGCATAAACTTCCTTCCTGGTTGAAGTTATGGAAATCTCCTTGGAGAGGAAAAGTGAAAGGTGGAGAATTAATTCCTAAAGGAGAGGAAGAATTGTATGATCTTGGAATCCGAACAAGAAAAATGTTCCCTGACTTGTTTAGCGATGATTATCACCCGGAAGTTTATACCATTAAAGCAACTCAGGTTCCTCGAGCGTCAGCTAGTGCTGTGGCATATGGTATGGGGCTATTTAGTGGACGAGGAAGCCTTGGATCAGATCATCATCGAGCCTTTTCTGTCATCAGCGAGAGCCGTGCCAGTGATACCATGCTTAGGTTTTTTGATTGTTGTCAAAGATACGAGGATTATAGGAAGTATCAGGAACCTGCTGTTGACAAGCTCAAAGAACCTGTACTTGATGATATAACTAAGTTACTCAGAGGCATCCTTATTGGACATAACGGATCAAGCTTGTGGACTGTTCAGCCCTTCCGAGCTTGCAATCTTTGTCTACGTGCTCAGGTTGCTTTGTTGGAGTGGACGGATGATGTGGAGGTGTTTATATTGAAGGGTTATGGTAATTCATTAAACTATAAAATGGGAGTTCCTTTGTTGGCAGATATTGTTCAATCCATGGAGCAAGCTATCAAGGCCAAAGAAGAAAAGCAAATTCCTGGCAGCTACGAGAAGGCAAGACTTCGTTTTGCTCATGCCGAAACTGTGCTTCCATTCACATGTTTGCTCGGGCTCTTCCTTGAAGGACCTGATTTTAGAAAAATACAAACGGAGCAGCCTTTGGAACTTCCTCCACGGCCTCCAGCTACTAGAATATGGAAGGGGAGCGCTGTTGCACCTTTTGCTGGGAATAACATGCTTGTTCTCTATAACTGCCCCGCTAACTCGTCGGATCAGTACTTCGTGAGAGTTTTGCATAATGAAGAACCCATAGCAATGCCGGGTTGTGATGGTTCGGATTTTTGCTCCTTCAAAGACTTCAAGGAGAAAATTGTAGCACCTCATCTCAAGCATGATTTCAACACATTGTGCACTGCAAATCTTGAAGAACCTGTGTCGGAGCCTGAAACGATTTCATTTTATCTGGATCTTGAGATTGCATCTGTTTCACACGTCTTTGATTCAAAGATTAGACTCAACATTGAGCGTTTGGCATTTGCTTGGATGTTTTGTTTTACCACACAAGGCACGTGCTTCACCTTCTGTACTCCTAAATTATACAAGATTAGAATCCTTCAATTCTCTGAAATACTCTCTACTATGGCTTCCCATTCCCCTAATCTCGAGTGTCGGATGTACGAAGCCAAGTACCCCGAGGTCGACATGGCCGTCATGATCCAGGTCAAGAACATTGCTGACATGGGCGCTTACGTCTCTCTTCTCGAGTACAACAACATAGAGGGTATGATTCTCTTCTCCGAGCTCTCTCGCCGTCGTATTCGTAGTGTCAGCAGCTTAATTAGGGTCGGTCGAATCGAGCCCGTCATGGTCCTCAGGGTCGATAAGGAGAAGGGGTATATTGATTTGAGTAAGAGGAGGGTTTCTGAGGAGGATATTCAGGCATGTGAGGAGAGGTATAACAAGAGCAAGCTTGTTCACTCTATAATGCGCCATGTTGCTGAGACTGAAAATATTGATTTGGAGGACTTGTATATCCATGTTGGCTGGCCTCTATACCGGAAATATGGTCATGCTTTTGAGGCATTCAAGGTTATTGTAACTGATCCTGATACGGTGTTGAATTCTCTCACCCGTGAAGTCAAGGAAGCTGGTCCTGATGGACAAGAGGTAACTAAGGTAGTTCCCGCAATGTCTGAGGATGTAAAAGATGCGCTAATTAAAAATATTAGAAGAAGAATGACTCCTCAACCCTTGAAGGTTCGGGCTGATATTGAGATGAAGTGTTTCCAGTTTGACGGTGTTCTTCACATTAAGGAAGCAATGCGGAAAGCTGAGGCTGCTGGGAATGATGATTGTCCTGTTAAGATTAAATTGGTTGCTCCTCCACTCTATGTTCTTACGACCCAGACACTTGACAAGGAGCAAGGAATCACTGTTCTTGAAAAAGCAATCACGGCCTGCACGGAGGCAATCGAGCATCACAAGGGAAAGCTTGTAGTGAAGGAGGCACCTAGAGCGGTGAGTGAAAGAGACGACAAATTACTTGCTGAGCACATGGCGAAGCTACGACAAGACAATGAAGAGATTAGTGGCGATGAGGATAGTGAGGAAGAGGAAGACACGGGAATGGGAGAAGTCGATGTCGAAAATGCAGACGACGTCCGTGCTCTTTTTCTTCTCTCATCTCTCTCTGTATCTCACTCTCTCCTCTCTGATCCACGCTTCTGCTCATCAATGGCGGTTTCACTCCAAACCTTCATTCAAGAACGCAAAATCCCTTTCTTCTTCACCCTCTCCGTCCTTCTCTTTTGCTTTCTCATTCTCTTCTTCACCAACTCCTTTTCTCTCAACCCTCTCGTTCGTACTTACTCCGCTCTTCGATCCCCTTCTAAAACCCCATCTTCTTCTGGGGTTTATTCGGATTCTGTTCTTTCTCACGATCTTGATTCTTCTTCTTTGGCGGCGAATTTCACCTGGAAGCTCTGTAATGGCTCTGTGGCGGTTGATTTTGTTCCCTGTTTGGATAACTTCAAGGCGATTAAGGCTTTGCAGTCGAGGAAGCACATGGAGCACCGTGAACGGCATTGCCCTAGTCCCAGTCCCCGCTGTTTGATTCCTCTTCCGAGTGGTTATAAGGTGCCGGTTCCCTGGCCCAAGAGTAGGGACATGATTTGGTACGATAATGTTCCTCATGCGAAGCTTGTTGAATACAAGAAAGATCAACATTGGGTAGTTAAGTCGGGCGATTATCTTAACTTTCCTGGAGGAGGCACACAGTTCAAGGATGGAGTTGATCGCTACATTGACTTCATTCAGAAGACTTTATCGGACATTAAGTGGGGGAAGAACATCAGAGTTATTCTAGATGTTGGCTGTGGTGTTGCCAGCTTTGGTGGCTATTTACTGCAGAAGAATGTTCTTGCCATGTCCTTTGCCCCAAAGGATGAACATGAAGCACAGATACAATTTGCTTTAGAACGGGGAATTCCTGCTACTCTTTCAGTCATTGGAACACAGAGGCTGACATTTCCAGACAATGTTTATGATTTGATCCATTGTGCACGTTGCAGGGTCCATTGGGATGCAGATGGTGGGAAACCATTATTGGAGCTCAATAGGATTCTCAGGCCTGGAGGATATTTCATTTGGTCTGCTACACCGGTTTATCGTGACGATGAACGAGACAAGAGTGTCTGGAATGCAATGGTATTGCTAACGAAGTCGATGTGCTGGAAGGTTGTGAAAAAGACTTCTGATTCATCTGGAGTCGGCCTCGTAATATATCAGAAGCCCACGACAACGTCTTGTTATGAAAAACGTAGTGAAAATGATCCTCCCATATGTGATGAAAAGAACAAGAGAAATAATTCTTGGTATGTGCCTCTGACTAGATGTATTTCCCAGCTTCCAGTTGATAACAAAGGCAACTATTATGCTTGGCCTTCGCCATGGCCGCAGAGACTAACTAGCAAACCTCTTAGCTTGTCTGTTGAATCAAATGCTGAGGAGAAATTCTTGGAGGATACCAAACATTGGTCTACTGTTGTATCAGATGTTTATCGAGTTAATGTCGGCATAGACTGGTCGAGTATCCGAAATGTGCTGGATATGAATGCTGGCTATGGAGGGTTTGCAGCTGCACTATTTGATCTACCACTTTGGGTTATGAATGTTGTCCCCATAGACGTACCGGATACTTTGTCCATCATTTTCGATAGAGGATTGATCGGTCTCTACCACGACTGGTGCGAGTCCTTAAACACCTACCCTCGAACCTACGACCTTCTACATTCGAGCTTTCTCTTCACAGTTCTTAAGAGAAGTTACTTGAGTTCTGCGTTTCTAAGTTTCAACGACTTCGGTTATCCTTTCAGATGCGACGTGGTAGATACTGTCGTGGAGATGGATAGAATAGTGAGGCCAGGCGGATATGTTCTGATTCAGGAAAGCTTGGAGGTAATAAAGGAGCTTGGTCCCATGTTTGGCTCACTTCACTGGTCTGTTTCTGTATATCAAGATGAGTTTCTTGTTGGAAAAAAGGGATTTTGGCGGCCATCAGCCCCTAATTCCAAGTGA | 4482 | 44.49 | MAGFLLLFLFLFTNSVAEEVSFGIKQHLSTVTRYGASKGGHDSNYASAPDGCVPIHLNLVARHGTRAPTKKRIRELNSLESQLEMLIREAVENGLSLHKLPSWLKLWKSPWRGKVKGGELIPKGEEELYDLGIRTRKMFPDLFSDDYHPEVYTIKATQVPRASASAVAYGMGLFSGRGSLGSDHHRAFSVISESRASDTMLRFFDCCQRYEDYRKYQEPAVDKLKEPVLDDITKLLRGILIGHNGSSLWTVQPFRACNLCLRAQVALLEWTDDVEVFILKGYGNSLNYKMGVPLLADIVQSMEQAIKAKEEKQIPGSYEKARLRFAHAETVLPFTCLLGLFLEGPDFRKIQTEQPLELPPRPPATRIWKGSAVAPFAGNNMLVLYNCPANSSDQYFVRVLHNEEPIAMPGCDGSDFCSFKDFKEKIVAPHLKHDFNTLCTANLEEPVSEPETISFYLDLEIASVSHVFDSKIRLNIERLAFAWMFCFTTQGTCFTFCTPKLYKIRILQFSEILSTMASHSPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIRVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEDLYIHVGWPLYRKYGHAFEAFKVIVTDPDTVLNSLTREVKEAGPDGQEVTKVVPAMSEDVKDALIKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGITVLEKAITACTEAIEHHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVENADDVRALFLLSSLSVSHSLLSDPRFCSSMAVSLQTFIQERKIPFFFTLSVLLFCFLILFFTNSFSLNPLVRTYSALRSPSKTPSSSGVYSDSVLSHDLDSSSLAANFTWKLCNGSVAVDFVPCLDNFKAIKALQSRKHMEHRERHCPSPSPRCLIPLPSGYKVPVPWPKSRDMIWYDNVPHAKLVEYKKDQHWVVKSGDYLNFPGGGTQFKDGVDRYIDFIQKTLSDIKWGKNIRVILDVGCGVASFGGYLLQKNVLAMSFAPKDEHEAQIQFALERGIPATLSVIGTQRLTFPDNVYDLIHCARCRVHWDADGGKPLLELNRILRPGGYFIWSATPVYRDDERDKSVWNAMVLLTKSMCWKVVKKTSDSSGVGLVIYQKPTTTSCYEKRSENDPPICDEKNKRNNSWYVPLTRCISQLPVDNKGNYYAWPSPWPQRLTSKPLSLSVESNAEEKFLEDTKHWSTVVSDVYRVNVGIDWSSIRNVLDMNAGYGGFAAALFDLPLWVMNVVPIDVPDTLSIIFDRGLIGLYHDWCESLNTYPRTYDLLHSSFLFTVLKRSYLSSAFLSFNDFGYPFRCDVVDTVVEMDRIVRPGGYVLIQESLEVIKELGPMFGSLHWSVSVYQDEFLVGKKGFWRPSAPNSK | 1493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 640577 | 657201 | + | CmaCh04G001370.1 | Cma04g00137 | 291218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00137 | 1493 | SUPERFAMILY | eIF-2-alpha, C-terminal domain | 718 | 834 | IPR024055 | - | |
Cma04g00137 | 1493 | SUPERFAMILY | Nucleic acid-binding proteins | 530 | 612 | IPR012340 | - | |
Cma04g00137 | 1493 | Pfam | Eukaryotic translation initiation factor 2 alpha subunit | 645 | 775 | IPR011488 | GO:0003723|GO:0003743 | |
Cma04g00137 | 1493 | MobiDBLite | consensus disorder prediction | 827 | 846 | - | - | |
Cma04g00137 | 1493 | CDD | HP_HAP_like | 118 | 402 | IPR000560 | - | |
Cma04g00137 | 1493 | Gene3D | EIF_2_alpha | 720 | 842 | IPR024055 | - | |
Cma04g00137 | 1493 | SUPERFAMILY | Phosphoglycerate mutase-like | 22 | 446 | IPR029033 | - | |
Cma04g00137 | 1493 | CDD | S1_IF2_alpha | 533 | 608 | IPR044126 | GO:0003723 | |
Cma04g00137 | 1493 | Pfam | Putative S-adenosyl-L-methionine-dependent methyltransferase | 971 | 1476 | IPR004159 | GO:0008168 | |
Cma04g00137 | 1493 | Gene3D | Vaccinia Virus protein VP39 | 1040 | 1219 | IPR029063 | - | |
Cma04g00137 | 1493 | Gene3D | Translation initiation factor 2; subunit 1; domain 2 | 610 | 714 | IPR024054 | - | |
Cma04g00137 | 1493 | Pfam | Histidine phosphatase superfamily (branch 2) | 56 | 233 | IPR000560 | - | |
Cma04g00137 | 1493 | Pfam | Histidine phosphatase superfamily (branch 2) | 280 | 402 | IPR000560 | - | |
Cma04g00137 | 1493 | Coils | Coil | 73 | 93 | - | - | |
Cma04g00137 | 1493 | Coils | Coil | 821 | 841 | - | - | |
Cma04g00137 | 1493 | Gene3D | - | 521 | 609 | IPR012340 | - | |
Cma04g00137 | 1493 | PANTHER | SAM-DEPENDENT METHYLTRANSFERASE | 885 | 1488 | IPR004159 | GO:0008168 | |
Cma04g00137 | 1493 | PANTHER | METHYLTRANSFERASE PMT23-RELATED | 885 | 1488 | - | - | |
Cma04g00137 | 1493 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 1325 | 1459 | IPR029063 | - | |
Cma04g00137 | 1493 | ProSiteProfiles | S1 domain profile. | 536 | 607 | IPR003029 | GO:0003676 | |
Cma04g00137 | 1493 | CDD | AdoMet_MTases | 1089 | 1184 | - | - | |
Cma04g00137 | 1493 | SUPERFAMILY | eIF2alpha middle domain-like | 609 | 714 | IPR024054 | - | |
Cma04g00137 | 1493 | SMART | S1_6 | 534 | 607 | IPR022967 | - | |
Cma04g00137 | 1493 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 995 | 1204 | IPR029063 | - | |
Cma04g00137 | 1493 | MobiDBLite | consensus disorder prediction | 831 | 846 | - | - | |
Cma04g00137 | 1493 | Pfam | S1 RNA binding domain | 533 | 607 | IPR003029 | GO:0003676 | |
Cma04g00137 | 1493 | Gene3D | - | 22 | 432 | IPR029033 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01105 | Cma04g00137 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00137 | Cma-Chr4:640577 | Cma07g00451 | Cma-Chr7:1966524 | 0 | dispersed | |
Cma04g00137 | Cma-Chr4:640577 | Cma04g01105 | Cma-Chr4:5682904 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00137 | - | - | bhj:120081432 | 1077.0 |