Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00159 ATGGCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTACTCTTTTCCTCTCTCTTCGTCTCTTCTCTCTTTCTCTTTTTCCGCTCCGTCACATTCCGCCGAGTGCGCCTGCCTCCGGGAACTCTCGGCCTCCCCTTAATCGGGGAGACCCTTCAACTCATCTCCGCCTACAAGACTGAGAACCCCGAACCCTTCATCGACGAGCGGGTCCGCCGCTTCGGACCGGTTTTTACTACTCATTTGTTTGGCGAGCCGACTATTTTCTCGGCCGACTTGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAATGTAGCTACCCCGGTTCCATTTCCAACTTGCTTGGGAACCATTCTTTGTTGCTTATGAAAGGGAGTTTGCACAAAAGAATGCATTCTTTGACTATGAGCTTTGCCAATTCGTCCATTATTCGCGACCGTCTTTTGGTCGATGTGGACCGGTTGATTCGGCTCAACTTGCAGTCCTGGACCGGCCGGATCTTCCTCTTGGAGGAGGCCAAAAAGATAACGTTTGAGTTAGCCGTGAAGCAATTGATGAGCTTTGATCGGTGTGAATGGACACAAAATCTGATGAAGGAATATCTTCTGGTCATTGAAGGCTTTTTTACCGTCCCTCTCCCTCTCTTTTCCACCACTTACCGTGGAGCCATTCAGGCTCGGAGGAAGGTGGCGGAGCAATTGGGGTTGGGGACGGTGGTGCGGCAGCGGAGAAAAGAGAGGGAGGGTGGAGTGAAGAAGAAGGACATGCTAGGAGCGTTGCTGGCCGGAGAAAACTCCCTCTCCGATGAGCAAATAGTAGATTTCTTATTGGCTCTATTGGTGGCGGGGTATGAAACGACGTCAACTACCATGACGCTGGCCGTCAAGTTTCTGACGGAGACGCCACTGGCTTTAGCCCAATTACAGGAAGAGCAGGAGAAAATCAAAGGAAGGAAGAAGGAATCAGAGCAACATCTCCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTAAATGAAACATTGAGAGTTGGCAACATAATCAGTGGAGTTTTTAGGAGAGCTGTCACAGATGTGAATATCAAAGGTGGTTATACAATTCCAAAGGGATGCAGGGTTTTTGCATCGTTTCGTGCAGTTCATATGAACCATCATCATTTCGACGATGCTCGCTCCTTCAACCCATGGAGATGGCAGCAACAGAACAGCTTGGGGTCAACCACAAATGCATTTACACCATTCGGAGGAGGTCCGAGGTTATGCCCGGGTTACGAGCTTGCCAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTTACGCAATTCAGATGGGTTCCAGCAGAAGATGATAAGTTGGTGTTTTTCCCAACTACAAGAACACAGAAACGCTATCCTATCTACGTCACCCGTAAGGACGAAACAACACAATTACACACAATATGA 1464 48.02 MAFFFFFFFFFFLLFSSLFVSSLFLFFRSVTFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTIFSADLETNRFILQNEEKLFECSYPGSISNLLGNHSLLLMKGSLHKRMHSLTMSFANSSIIRDRLLVDVDRLIRLNLQSWTGRIFLLEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPLFSTTYRGAIQARRKVAEQLGLGTVVRQRRKEREGGVKKKDMLGALLAGENSLSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEQEKIKGRKKESEQHLLQWNDYKSMPFTQCVVNETLRVGNIISGVFRRAVTDVNIKGGYTIPKGCRVFASFRAVHMNHHHFDDARSFNPWRWQQQNSLGSTTNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFRWVPAEDDKLVFFPTTRTQKRYPIYVTRKDETTQLHTI 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 787794 791819 - CmaCh04G001590.1 Cma04g00159 291240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00159 487 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PANTHER CYTOCHROME P450 26 17 477 - -
Cma04g00159 487 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 Pfam Cytochrome P450 38 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Cma04g00159 487 PANTHER CYTOCHROME P450 90A1 17 477 - -
Cma04g00159 487 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g00159 487 Coils Coil 308 328 - -
Cma04g00159 487 Gene3D Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01122 Cma04g00159 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00159 Cma-Chr4:787794 Cma14g01267 Cma-Chr14:10046353 4.07E-126 dispersed
Cma04g00159 Cma-Chr4:787794 Cma04g01122 Cma-Chr4:5801740 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00159 K09588 - csv:101216594 759.214