Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00184 ATGCTTCCCAGAAAGTTCAGTGGTTGGAGATATGACTTTCTTCAAGCTTTGTATATAAAGGCCCTTCCTAAGCTGATCATATTTATGTTTCCAGTCATGACCATGGCAGGAAATAATGCGTCTTCTTCTTTGATCTTCAAGCTCGTCATTCTAAACCTCGTTTGTTGTCTGCTCGCTTCTAGCTTCGATTCTGGTAACGATGGGCGAAAGGTTTATATTGTGTACTTGGGAAACAAGCGGGAGGATACGGCTTCAACTCCTTCACATCATATGAGAATGTTGGAAGAAACGATTGGCAGCACGTTCGCTCCCGAAGCTCTCCTCCATAGCTACAAGAGAAGTTTCAATGGATTCGTGGTTAGGCTCACCGAAGAAGAAGCTCAAAAGATTTCTGCTAAGGACGGTGTTGTCTCTGTGTTTCCAAACGAAAAGAAACATCCTCATACGACAAGATCATGGGATTTTATGGGTTTTACTACAAATGTTCCTCGTGTAAAACAAGTTGAAAGCGACATAGTAGTTGGAGTTTTGGACACAGGAATTTGGCCGGAGTCTCCTAGCTTTAGTGACGTAGGCTATGGCCCTCCACCAGCTAAATGGAAGGGCACTTGCCAAGCCTCTACCAACTTTCGTTGCAACAAAAAAATTATCGGAGCTCGAGCATACCGTAGTGACAACAATTTTCCTCCCGAAGACTTTAAAAGTCCAAGAGATTCAGAAGGCCACGGGACACACACGGCATCGACTGTGGCCGGTGGTCTCGTGAGCCAGGCAAGTTTATTCGGTCTTGCGCTTGGCACAGCTAGAGGAGGGGTTCCTTCCGCGCGCATTGCTGTGTACAAGGTATGTTGGTCGGATGGGTGCGAGGATGCCGATATTCTTGCTGCATTCGACGATGCAATTGCCGATGGTGTAGATATCATATCTCTTTCAGTTGGGGGGAACGAACCCAAGTTTTACTTCAACGATTCAATTGCCATTGGAGCTTTCCATTCCATGAAGAATGGAATATTGACCTCCAACTCCGCTGGAAATGATGGCCCTGACTTCCTCACCGTCAGAAATTTCTCTCCGTGGTCTCTTTCCGTGGCTGCAAGCTCCATCGACAGAAAGTTGGTATCAAAAGTGCAGCTTGGCAACAATAATATCTTTCAGGGATTTACAATTAACACGTTTGATCTTCAACAAAAACAATTTCCTCTAATTTATGCTGGGAATGCACCTAATATCTCTGGAGGCTTCACTGGTGCTACCTCCCGATTTTGTTCGAGGAACTCAGTCGATCGCAACTTGGTGAAAGGAAAAATCCTTGTTTGTGATTCCATATTGTCTCCTTCAACATTTGCGTCCTTCAGTAGCGCAGTTGGCGTTGTTATGAATGATGCTGGCGTGAAAGATAATGCAAGGTCCTATCCCTTGCCTTCTTCCTACCTCGGCACAGTGGCTGGTAACAACATCAAAACCTACATGGGATCAAATAACTTTCCGACTGCAACGATTTTCAAGAGCAATGCAGTGAACGATACATCTGCTCCTATAGTAGTTTCCTTCTCCTCGAGAGGACCCAATCCTGTAACCTTGGACATTCTCAAGCCTGATTTGACTGCTCCTGGAGTTGAAATTCTCGCCGCATGGCCTCCTGATGCACCGGTCTCCGGTGGAATCAGAGATTCGAGGTCGACGCTCTATAATATAATCTCGGGGACGTCGATGTCTTGCCCACATGCCACCGCAGCTGCAGTGTACGTAAAAACATTCCATCCCACCTGGTCTCCCGCTGCCATTAAGTCAGCTCTCATGACAACGGCTATTCCTTTGAATGTGGGACTCAATCCACAAGCAGAGTTCGCATATGGTGCTGGCCATATCGACCCATTAAAGGCAACAAATCCAGGGTTGGTCTACGATGCCAATGAGACCGACTACGTGAACTTCTTGTGTGGCCAAGGTTACTCCACCGCCATGGTACGGCGTCTCACCGGCGACGGCAGTGTTTGTACCGCTGCCAACTCCGGCAGAGTTTGGGATCTAAACTATCCCTCCTTTGCACTCTCCACCACTCCTTCAGAATCCATCAACCAATTCTTCACAAGAACACTCACAAACGTGGACACGGAAGCCTCCACATATACATCTAAGATCCTTGGCGCCCCAGAAGGGCTCACAATCACAGTGGACCCGCCGGTTCTGTCATTCAATGGCATTGGAGACAAGAAATCTTTCACGTTAACCATTGATGGAACCATCATCAAAACCATAGTGTCTGCTTCTGTGGTGTGGAGCGATGGCTCTCACAATGTGAGAAGCCCTATTACAATATATATTGTCAACAAAGCTTAA 2340 46.75 MLPRKFSGWRYDFLQALYIKALPKLIIFMFPVMTMAGNNASSSLIFKLVILNLVCCLLASSFDSGNDGRKVYIVYLGNKREDTASTPSHHMRMLEETIGSTFAPEALLHSYKRSFNGFVVRLTEEEAQKISAKDGVVSVFPNEKKHPHTTRSWDFMGFTTNVPRVKQVESDIVVGVLDTGIWPESPSFSDVGYGPPPAKWKGTCQASTNFRCNKKIIGARAYRSDNNFPPEDFKSPRDSEGHGTHTASTVAGGLVSQASLFGLALGTARGGVPSARIAVYKVCWSDGCEDADILAAFDDAIADGVDIISLSVGGNEPKFYFNDSIAIGAFHSMKNGILTSNSAGNDGPDFLTVRNFSPWSLSVAASSIDRKLVSKVQLGNNNIFQGFTINTFDLQQKQFPLIYAGNAPNISGGFTGATSRFCSRNSVDRNLVKGKILVCDSILSPSTFASFSSAVGVVMNDAGVKDNARSYPLPSSYLGTVAGNNIKTYMGSNNFPTATIFKSNAVNDTSAPIVVSFSSRGPNPVTLDILKPDLTAPGVEILAAWPPDAPVSGGIRDSRSTLYNIISGTSMSCPHATAAAVYVKTFHPTWSPAAIKSALMTTAIPLNVGLNPQAEFAYGAGHIDPLKATNPGLVYDANETDYVNFLCGQGYSTAMVRRLTGDGSVCTAANSGRVWDLNYPSFALSTTPSESINQFFTRTLTNVDTEASTYTSKILGAPEGLTITVDPPVLSFNGIGDKKSFTLTIDGTIIKTIVSASVVWSDGSHNVRSPITIYIVNKA 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 894719 898945 - CmaCh04G001840.1 Cma04g00184 291265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00184 779 Pfam Subtilase family 170 621 IPR000209 GO:0006508|GO:0008236
Cma04g00184 779 PRINTS Subtilisin serine protease family (S8) signature 238 251 IPR015500 -
Cma04g00184 779 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Cma04g00184 779 PRINTS Subtilisin serine protease family (S8) signature 169 188 IPR015500 -
Cma04g00184 779 Gene3D - 646 776 - -
Cma04g00184 779 Gene3D - 369 507 - -
Cma04g00184 779 Pfam Fibronectin type-III domain 676 773 IPR041469 -
Cma04g00184 779 Gene3D Peptidase S8/S53 domain 171 642 IPR036852 GO:0004252|GO:0006508
Cma04g00184 779 ProSiteProfiles Serine proteases, subtilase domain profile. 152 629 - -
Cma04g00184 779 PANTHER PUTATIVE-RELATED 59 774 - -
Cma04g00184 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 57 148 IPR037045 -
Cma04g00184 779 Pfam Peptidase inhibitor I9 71 144 IPR010259 -
Cma04g00184 779 CDD PA_subtilisin_like 376 500 - -
Cma04g00184 779 CDD Peptidases_S8_3 145 604 IPR034197 -
Cma04g00184 779 MobiDBLite consensus disorder prediction 227 247 - -
Cma04g00184 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 774 IPR045051 -
Cma04g00184 779 SUPERFAMILY Subtilisin-like 147 633 IPR036852 GO:0004252|GO:0006508
Cma04g00184 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01156 Cma04g00184 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01270 Cma-Chr2:7445329 Cma04g00184 Cma-Chr4:894719 0 dispersed
Cma04g00184 Cma-Chr4:894719 Cma04g00537 Cma-Chr4:2728452 0 dispersed
Cma04g00183 Cma-Chr4:886209 Cma04g00184 Cma-Chr4:894719 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00184 - - bhj:120082098 1241.1