Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00225 ATGGAGGGTTTTGGGAGGCTTTTTGAATTGGCTAAGCCATATTTAGTGGTCGTTTTTGTGCAGTTTGGCTATGCTGGAATGACCATTCTTGCTAAGTCTGCCTTGGACAAAGGCATGAGCCCACATGTCTTTGTGGTTTATCGTCATGCTGTTGCTACTCTTGTCATTGCTCCTTTCGCCATTATCTTTGACAGGAAGGCAAGGACGAAGATGACTTTTTCGATATTATGGAAGATTGTGTTGATGGGTTTATTGGAGCCAGTGATCGATCAAAACTTGTACTTTACTGGTATGAAGCTCACAACAGCAACGTTTACAGCAGCCATGTGCAATATTCTACCAGCTTTTTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAGTATTTTGAAAAGGGGAAGCCAAGCGAAGATCCTAGGAACCATAGTGACCGTAGGAGGAGCTATGATTATGACGTTCATAAGAGGGCCAATGTTGAATCTTCCATGGACAAAAGGGAGCCAGCCCTCTGCTTCTTCTGGTGGCTCTGCAACTCACCAGAGCCCACTCAAGGGCTCACTCATGATAGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAAGAGTACCCGGTCGAGCTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAGGGTCTGGGGTGGCTTTGATCATTGAGAGGGGGAACCCTGCAGCTTGGGTTTTGCACTTTGACAGTCAGCTTCTGGCGGTTGTTTATGCTGGAGTAATATGTACAGGGGTGACTTATTACATTCAAGGAGTAGTGATGCAAACAAAAGGGCCTGTTTTTGTGACAGCATTCAGTCCTTTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGGCCGAGATAATGTTGTTGGGAAGGGTTCTTGGAGCAGTGGCCATTATCAGTGGCTTGTATTTGGTTCTGTGGGGCAAAAGCAAAGATCAAGCTTCTGTTAAATTAGAGTGTGATAAGATAACACCTTGTGAGCAACAAATGGCTGGAAATGGTGAAGAATTTGTGGTGGTTGATGTTACCAAAGAGGTCACAAATTGA 1104 45.38 MEGFGRLFELAKPYLVVVFVQFGYAGMTILAKSALDKGMSPHVFVVYRHAVATLVIAPFAIIFDRKARTKMTFSILWKIVLMGLLEPVIDQNLYFTGMKLTTATFTAAMCNILPAFSFLMAWACRLEKVSILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKGSQPSASSGGSATHQSPLKGSLMIATGCICWSAFITLQAITLKEYPVELSLTALICLVGTIGGSGVALIIERGNPAAWVLHFDSQLLAVVYAGVICTGVTYYIQGVVMQTKGPVFVTAFSPLSMILVAIMSSFILAEIMLLGRVLGAVAIISGLYLVLWGKSKDQASVKLECDKITPCEQQMAGNGEEFVVVDVTKEVTN 367
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1090737 1093064 + CmaCh04G002250.1 Cma04g00225 291306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00225 367 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Cma04g00225 367 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Cma04g00225 367 PANTHER WAT1-RELATED PROTEIN 9 340 - -
Cma04g00225 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cma04g00225 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
Cma04g00225 367 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00225 Cma-Chr4:1090737 Cma04g01783 Cma-Chr4:8994980 0 dispersed
Cma04g00224 Cma-Chr4:1085071 Cma04g00225 Cma-Chr4:1090737 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00225 - - cmos:111458151 668.307