Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00236 ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACTCAATGTCATCGGAGATTGTCCTTTCACTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACATATTGCATCTCATCAATTTATCCGATAAACCCTGTTGGTTCTTGGGAGTGAGCCCAGAAGGGAAGGTGCCGGTGGCGAAGATTGATTGTCAATGGGTTCCTGATTCTGATGTCATTGTGAGGATTCTTGAGGACAAGTTTCCAAACCCTTCTCTTCTTACTCCCCCACAATTTTCTTCTGTAGGATCAAAAATAGGCCCTGCTTTTGGGAAATTCTTGAGAAGCAAGGACCCGAATGATTGTTCAGAGCAGGTTTTGCTCAGAGAGCTGAAGGCATTGGACAAGCATCTCATGGCTCATGGTCCTTATGTCGCTGGAGCGAAGATAGGTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATCTTGATATTGCTCTTGCCCATTTCAAGAACTTTCATATCCCCCAAAACTTAGCCTGTTTATCTGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTCTGGGTTGGGAGGCCAAGGTGAATGCTGCATGA 642 45.79 MAIEVAVKAAVGALNVIGDCPFTQRVLLTLEEKKVPYILHLINLSDKPCWFLGVSPEGKVPVAKIDCQWVPDSDVIVRILEDKFPNPSLLTPPQFSSVGSKIGPAFGKFLRSKDPNDCSEQVLLRELKALDKHLMAHGPYVAGAKIGAVDLSLAPKLYHLDIALAHFKNFHIPQNLACLSAYKKLLFARESFVKTKAAPEHVILGWEAKVNAA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1154973 1156428 - CmaCh04G002360.1 Cma04g00236 291317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00236 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cma04g00236 213 PANTHER DEHYDROASCORBATE REDUCTASE 2 210 - -
Cma04g00236 213 SFLD Glutathione Transferase (cytosolic) 20 175 IPR040079 -
Cma04g00236 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cma04g00236 213 SUPERFAMILY GST C-terminal domain-like 95 209 IPR036282 -
Cma04g00236 213 CDD GST_N_family 20 81 - -
Cma04g00236 213 Pfam Glutathione S-transferase, C-terminal domain 120 171 - -
Cma04g00236 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 210 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cma04g00236 213 Gene3D Glutaredoxin 1 89 - -
Cma04g00236 213 SUPERFAMILY Thioredoxin-like 16 87 IPR036249 -
Cma04g00236 213 Gene3D - 90 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00236 Cma-Chr4:1154973 Cma14g00821 Cma-Chr14:4147107 2.42E-79 dispersed
Cma04g00236 Cma-Chr4:1154973 Cma04g00237 Cma-Chr4:1157423 5.77E-92 tandem
Cma04g00236 Cma-Chr4:1154973 Cma04g01211 Cma-Chr4:6178882 3.66E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00236 K21888 - cmax:111483829 338.961