Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00292 ATGGAGCTTAGGAGTGGAGCTTTGCTATGGGGAGTGGTGGTTCCTTTTTTGGCGATGGTCAGCTTGGAAGGCTGCACCATTGGACTAACTATTTTGGCTAAGACAGCCATTACTTATGGAACCAACACTTTTGTTTTTGTTGTCTACACAAACGCTGTTGCTTCCTTCCTTCTTCTTCCTTATTCCTTCCTTTTTCACCTCAACCACAGAACGGATTATCAACAATCTTTGTTTTCCTTTCCTCTTCTCCTCCGAATCTTCCTCCTCGGCTTCACTGGGATATGTGTCTCTCAGAACCTTGCGTTTTTGGGCCTAAGCTACAGCTCTCCAATTGTTGTATGCGTAATGGGTCTTATGCTTCCAGCCATTTCTTTCATTCTCTCGATCCTTCTCAGGAGAACAAAAATTAACTGGAAAAGTCCAAGTTTCATTACAAAAGTAGTTGGCACAGTTATATCAGTTATAGGAGCTACATCCGAGGAGCTTTACCTAGGCCCCGTTGTTCGTCAGCATCCATCTTCTTCTTTACATTTACACTTCAAACAAAAGCTCTTGGTCTTCACTTCAACCACAGATCGTTGGATCATGGGTGGCCTTTTATTAGCAGCTGCCACTCTATGCGTCTCAATATGGAACATCATTCAGTTGGGTGTGGTGAAACAATACTCACAAGGGATGAAAGTTGCCTCCTTTTATAGTTTGGTGGGCACTTTAATGTCCGCAGCCATGGCTTTCTTTTTTGTCGATGACTTGAATGCATGGATAATCAAATCAAAATTCGACATCTTTCTAATCATTGCAACGGGTGTTTTTAGCGGTTTGATTAGGAATCGAGTGCAAATATGGTGCATGCAAATGAAAGGGCCATATTACGTGCCCATGTTCAAGCCCTTTGGTATTCTTTTTGCTACTTTCTTTGGCTCCACCTTTTTTGGAGATACTTTCCACTACGGAAGTGTGATGGCGGCGTTCATAGCTGGGATGGGATATTTGACTGTAATGTGGGGGCAAATCAATGAAGATCAAGGAAGAGATGATAAAAGCAACGATGATTTGTCTTCTTCTAGAGTTCCACTTCTGGATGAAGAATCAAAAGTGTAA 1101 42.23 MELRSGALLWGVVVPFLAMVSLEGCTIGLTILAKTAITYGTNTFVFVVYTNAVASFLLLPYSFLFHLNHRTDYQQSLFSFPLLLRIFLLGFTGICVSQNLAFLGLSYSSPIVVCVMGLMLPAISFILSILLRRTKINWKSPSFITKVVGTVISVIGATSEELYLGPVVRQHPSSSLHLHFKQKLLVFTSTTDRWIMGGLLLAAATLCVSIWNIIQLGVVKQYSQGMKVASFYSLVGTLMSAAMAFFFVDDLNAWIIKSKFDIFLIIATGVFSGLIRNRVQIWCMQMKGPYYVPMFKPFGILFATFFGSTFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDQGRDDKSNDDLSSSRVPLLDEESKV 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1449636 1451893 + CmaCh04G002920.1 Cma04g00292 291373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00292 366 PANTHER WAT1-RELATED PROTEIN 11 363 - -
Cma04g00292 366 MobiDBLite consensus disorder prediction 342 366 - -
Cma04g00292 366 Pfam EamA-like transporter family 27 157 IPR000620 GO:0016020|GO:0016021
Cma04g00292 366 PANTHER WAT1-RELATED PROTEIN 11 363 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00292 Cma-Chr4:1449636 Cma04g02720 Cma-Chr4:18350626 3.32E-66 dispersed
Cma11g01416 Cma-Chr11:9307080 Cma04g00292 Cma-Chr4:1449636 2.57E-21 dispersed
Cma04g00292 Cma-Chr4:1449636 Cma04g01584 Cma-Chr4:8027002 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00292 - - cmo:103489028 589.726