Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00321 | ATGGCGAAAGATGAGGACGTGAAGCTTGTGGGTTCCTGGACTAGTCCATTCGTGATGAGGCCACGAATCGCCCTCAACATCAAATCCGTTCACTACGAGTTCATTCAAGAAACATTCGGATCCAAAAGCCCGCTTCTTCTCCAATCCAACCCTGTTCACAAGAAGATCCCTGTTCTCATTCACGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGAAGTCTGGTCCTCCGCTCCGTCCATCCTTCCCTCCGACCCTTACGATCGCGCCCTCGCTCGATTCTGGGCTTCCGTCGTTGACGAAAAGTTTTTCACACCAATGAAAGCGAGTGTGGGTGCAGAAGGGGAGGCGAAGAAGGGGCTTATGAATCAAGCGGTGGAAGCCATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGGAAGGCGTTCTTCGGCGGAGACCATGTTGGGTTTGTTGATATCGCTTTCGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGATATCAAATGGGATGAAATTGATAGACGCAGTGAAGACGCCAGGGCTGGACGGATGGGCTCAGAGATTCTCTGCACACGACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAAGGTTCTGGCAGCCAAACTAAAAGAAAAGCACTGA | 687 | 51.97 | MAKDEDVKLVGSWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPVHKKIPVLIHAGKPIAESSIIVEYIDEVWSSAPSILPSDPYDRALARFWASVVDEKFFTPMKASVGAEGEAKKGLMNQAVEAIGLLEEAFGTLSRGKAFFGGDHVGFVDIAFGSFLGWIRVAEISNGMKLIDAVKTPGLDGWAQRFSAHDAVKDLLPDTAKLLEFSKVLAAKLKEKH | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1587829 | 1588701 | + | CmaCh04G003210.1 | Cma04g00321 | 291402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00321 | 228 | Pfam | Glutathione S-transferase, C-terminal domain | 113 | 200 | IPR004046 | - | |
Cma04g00321 | 228 | SFLD | Glutathione Transferase (cytosolic) | 3 | 226 | IPR040079 | - | |
Cma04g00321 | 228 | SFLD | Main.3: Omega- and Tau-like | 3 | 226 | IPR045073 | - | |
Cma04g00321 | 228 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - | |
Cma04g00321 | 228 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 218 | IPR045073 | - | |
Cma04g00321 | 228 | PANTHER | GLUTATHIONE S-TRANSFERASE U17 | 5 | 218 | - | - | |
Cma04g00321 | 228 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 78 | IPR004045 | - | |
Cma04g00321 | 228 | Gene3D | Glutaredoxin | 1 | 86 | - | - | |
Cma04g00321 | 228 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 220 | IPR010987 | - | |
Cma04g00321 | 228 | Gene3D | - | 87 | 227 | - | - | |
Cma04g00321 | 228 | SUPERFAMILY | GST C-terminal domain-like | 78 | 222 | IPR036282 | - | |
Cma04g00321 | 228 | CDD | GST_N_Tau | 7 | 80 | - | - | |
Cma04g00321 | 228 | CDD | GST_C_Tau | 91 | 220 | IPR045074 | GO:0004364|GO:0006749 | |
Cma04g00321 | 228 | SUPERFAMILY | Thioredoxin-like | 6 | 109 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00321 | Cma-Chr4:1587829 | Cma16g00465 | Cma-Chr16:2333498 | 1.43E-57 | dispersed | |
Cma04g00321 | Cma-Chr4:1587829 | Cma04g00323 | Cma-Chr4:1593757 | 1.19E-63 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00321 | K00799 | - | qsu:112040052 | 314.309 |