Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00321 ATGGCGAAAGATGAGGACGTGAAGCTTGTGGGTTCCTGGACTAGTCCATTCGTGATGAGGCCACGAATCGCCCTCAACATCAAATCCGTTCACTACGAGTTCATTCAAGAAACATTCGGATCCAAAAGCCCGCTTCTTCTCCAATCCAACCCTGTTCACAAGAAGATCCCTGTTCTCATTCACGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGAAGTCTGGTCCTCCGCTCCGTCCATCCTTCCCTCCGACCCTTACGATCGCGCCCTCGCTCGATTCTGGGCTTCCGTCGTTGACGAAAAGTTTTTCACACCAATGAAAGCGAGTGTGGGTGCAGAAGGGGAGGCGAAGAAGGGGCTTATGAATCAAGCGGTGGAAGCCATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGGAAGGCGTTCTTCGGCGGAGACCATGTTGGGTTTGTTGATATCGCTTTCGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGATATCAAATGGGATGAAATTGATAGACGCAGTGAAGACGCCAGGGCTGGACGGATGGGCTCAGAGATTCTCTGCACACGACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAAGGTTCTGGCAGCCAAACTAAAAGAAAAGCACTGA 687 51.97 MAKDEDVKLVGSWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPVHKKIPVLIHAGKPIAESSIIVEYIDEVWSSAPSILPSDPYDRALARFWASVVDEKFFTPMKASVGAEGEAKKGLMNQAVEAIGLLEEAFGTLSRGKAFFGGDHVGFVDIAFGSFLGWIRVAEISNGMKLIDAVKTPGLDGWAQRFSAHDAVKDLLPDTAKLLEFSKVLAAKLKEKH 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1587829 1588701 + CmaCh04G003210.1 Cma04g00321 291402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00321 228 Pfam Glutathione S-transferase, C-terminal domain 113 200 IPR004046 -
Cma04g00321 228 SFLD Glutathione Transferase (cytosolic) 3 226 IPR040079 -
Cma04g00321 228 SFLD Main.3: Omega- and Tau-like 3 226 IPR045073 -
Cma04g00321 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Cma04g00321 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 218 IPR045073 -
Cma04g00321 228 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 218 - -
Cma04g00321 228 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Cma04g00321 228 Gene3D Glutaredoxin 1 86 - -
Cma04g00321 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Cma04g00321 228 Gene3D - 87 227 - -
Cma04g00321 228 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Cma04g00321 228 CDD GST_N_Tau 7 80 - -
Cma04g00321 228 CDD GST_C_Tau 91 220 IPR045074 GO:0004364|GO:0006749
Cma04g00321 228 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00321 Cma-Chr4:1587829 Cma16g00465 Cma-Chr16:2333498 1.43E-57 dispersed
Cma04g00321 Cma-Chr4:1587829 Cma04g00323 Cma-Chr4:1593757 1.19E-63 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00321 K00799 - qsu:112040052 314.309