Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00366 ATGCCTGGCATACCTCTCGTGACTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTCTACTGCAAGCCAGTTGAACTCTATAACATTCTTCAACGTCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAGCTACAAAATAGAGACAGAACACAGAAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTTCGGGTGGGGGTGGGCAGGCACATAATCTGTTTCCTGTGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGGGCTTGCCTCTTAACTGGCATCAACAGAGGGGAATGCAGTTCTCAAGTCGTAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAAGCTGGGTCACTTGCTATATTATTTGTTAGCCACATTGGACCCACAAATACTTTGTCCGGAGTAGATTCAGTTGATGGGTCTCTATACATGGCATCTGTTCCTGTTGCAGGTTATTGCTTGTGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTTAAGACAACTTGCTTGGATGGAGAGAAGTGTCTGGGATTTCAAATTCCATTTAATTCCGATTCTATGCATACAGCACAGCAAGTACAAGTCACAATTTCTGCAGAGGAGTTTGGCGCTAGGGATAAATCTCCATACGATTCATACACGTACAGTGTAATACCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCAGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGATTAAATGTGCCAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACATGATCTCTTCAACTTTGAATTTTGGGTAACTGAGGAGTATCAAGCTGTAAATGTTTCCACAAAGGCTGATGTTTGGCGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGCTCTAGGCATCTCAGACGCAAAAAAGTTAAGAACGTAGTTCAAAGTGGAAAGCACATACATCCTTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCCAAGGTGAAAAAGCTCTAATATCAGGGCACAATGTTGCGCCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATCGAACGTGCAGACCTAAGACACTGTAACCTCTTGAGGAAGAGACAGTTCTTTCATTCCCATAGAGCTCAGCCGATGGCATTGGAACAAGTGTTATCCGATCGAGATAGTGAAGATGAAGTGGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTTGATGTAACCAAGGACGAGAAGCAAATGATGCATATGTGGAATTCATTTGTCAGGAAGCAACGGGTACTTGCAGATGGCCATATCCCCTGGGCTTGTGAGGCGTTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGAATACATAGTGAAGCTTCCGATTCTAAAAGCTGA 1821 42.12 MPGIPLVTRETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLSYKIETEHRRRIQMTISISRTSGGGGQAHNLFPVYVILGRLVSDIAVAEFSGVYRFNRACLLTGINRGECSSQVVANFILPEINKLAVEAKAGSLAILFVSHIGPTNTLSGVDSVDGSLYMASVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTTCLDGEKCLGFQIPFNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSVIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLIKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKADVWRSEIIADGIDPKQQTFFFRSRHLRRKKVKNVVQSGKHIHPFVVESEYSDKADDAQSSQGEKALISGHNVAPTMLQFAKTRKLSIERADLRHCNLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHSEASDSKS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1815858 1826858 - CmaCh04G003660.1 Cma04g00366 291447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00366 606 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 20 605 - -
Cma04g00366 606 Pfam VEFS-Box of polycomb protein 457 592 IPR019135 -
Cma04g00366 606 PANTHER POLYCOMB GROUP PROTEIN 20 605 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00366 Cma16g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00366 Cma-Chr4:1815858 Cma06g00805 Cma-Chr6:4246880 2.90E-13 dispersed
Cma16g00223 Cma-Chr16:1013170 Cma04g00366 Cma-Chr4:1815858 6.83E-140 transposed
Cma16g00222 Cma-Chr16:1005804 Cma04g00366 Cma-Chr4:1815858 5.61E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00366 - - csv:101213607 1056.97