Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00403 ATGCCAACCAGTGCCTCTCAATCGCCGGATAATCAGCTGTCGCCGCCGAACACACCTCACAAACAAGGCGCTAAGCCAATCCCATTTCTGATTTCGGTTGCTATTGGCATCATTGTTCGTTTCGCCGTCCCAAAACCGGCGGGGGTTTCAACAAAAGCGTGGCAGTTGCTCGCCATTTTCTTGTCGACGATTACTGGCCTTGTTTTGAATCCTTTGCCGGTGGGTGCTTGGGCGATTCTTGGCTTAACTGTGACTGTTGTTACTAAAACTTTGACGTTTTCTGCTGCTTTTAATGCCTTTACTAGTGAGGTTATTTGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGGTTTGTCAAAACTGGATTGGGGGATCGAATTGCTACGTATTTTGTTAAATGGATGGGCAAGAGCACGCTTGGTTTGTCTTATGGGTTAACGATTAGCGAGGCTTTGATAGCTCCTGCTATGCCGAGCACCACCGCCAGGGCTGGCGGTGTGTTCTTGCCCATCATTAAATCCTTGTCGCTCGCTGCTGATAGCAAGCCGAACGACCCTTCTTCTAAAAAGATTGGCGCGTATCTTGTTCAGTCTCAGTTTCAGAGTGCTGGTAACTCTAGTGCCCTGTTCTTAACGGCTGCTGCTCAAAATTTGTTGTGTATTAAACTGGCTGAGCAGCTCGGTGTGCAAATAACTAGCCCTTGGCTTACATGGGCTAAGTTTGCTTGTGTCCCTGCCATCATTGGTCTCTTGGCAACGCCTGCAATCTTATATAAACTGTTTCCTCCAGAGACCAAAAACACACCAGAAGCTCCAGCCATGGCTGCTAGAAAATTGGAGGCTATGGGTCCTGTCTCCAAGAATGAATGGTTCATGGTTGGTACTATGCTTGTTGCTGTGTCTTTATGGATTGCTGGTGAGAAACTTAAAATGGCTAGTGTTGTGGCTGCTATGATTGGTTTGTCTATGCTTCTTAGTCTTGGTGTTCTTGATTGGGATGATTGTTTGTCTGAGAAGTCGGCTTGGGATACTTTGGCTTGGTTTGGTGTTCTTGTGGGCATGGCTGGACAGTTGACGACGCTCGGTCTTGTCGGTTGGATGTCGAATTCTGTGGCGGATTTGCTGAAGTCTATGTCGCTCAGCTGGCCTGCTGCGTTTGCTATTCTTCAGGTGTTGTATTTCTTTGTTCATTACTTGTTTGCTAGCCAGACTGGTCATGTTGCTGCTTTGTACTCGGCGTTCCTTGCTATGCACTTGGCTGCTAAGGTGCCTGGTGTGTTGGCTGCTTTGGCGTTGGCTTATAACACTAATCTGTTTGGTGCATTGACTCATTATAGCAGTGGCCAAGCTGCTGTTTACTATGGAGGGGGTTTCGTTGAGCTAAGAGATGTATTCAAAGTCGGTTTAGCAATGGCGTTCATAAACGGTACTATCTGGACTGTATTTGGTTGCATTTGGTGGAAGATTCTGGAGAGGAAGCAAGGCTTCGCAACTTTGATTCAGTTTATCCACGAAAAACTTCGCCGAATTCCGATTACTGGGTCGAAAAGGGTTAAGTCATGGATTTAG 1569 46.72 MPTSASQSPDNQLSPPNTPHKQGAKPIPFLISVAIGIIVRFAVPKPAGVSTKAWQLLAIFLSTITGLVLNPLPVGAWAILGLTVTVVTKTLTFSAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLVQSQFQSAGNSSALFLTAAAQNLLCIKLAEQLGVQITSPWLTWAKFACVPAIIGLLATPAILYKLFPPETKNTPEAPAMAARKLEAMGPVSKNEWFMVGTMLVAVSLWIAGEKLKMASVVAAMIGLSMLLSLGVLDWDDCLSEKSAWDTLAWFGVLVGMAGQLTTLGLVGWMSNSVADLLKSMSLSWPAAFAILQVLYFFVHYLFASQTGHVAALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGGGFVELRDVFKVGLAMAFINGTIWTVFGCIWWKILERKQGFATLIQFIHEKLRRIPITGSKRVKSWI 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2059268 2063146 + CmaCh04G004030.1 Cma04g00403 291484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00403 522 MobiDBLite consensus disorder prediction 1 19 - -
Cma04g00403 522 PANTHER DICARBOXYLIC ACID TRANSPORTER2 5 490 - -
Cma04g00403 522 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 5 490 IPR030676 -
Cma04g00403 522 PIRSF DASS 12 492 IPR030676 -
Cma04g00403 522 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 44 487 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma04g00403 522 Pfam Sodium:sulfate symporter transmembrane region 29 490 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma04g00403 522 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00403 Cma-Chr4:2059268 Cma20g00081 Cma-Chr20:351263 2.19E-149 dispersed
Cma16g00265 Cma-Chr16:1245458 Cma04g00403 Cma-Chr4:2059268 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00403 - K03319 cmax:111485827 956.822