Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00604 ATGGTGTTGGGTAGATTTAGGGATGTTTTCTCGTTTGTAGCCAGTCGTTTGTCGGGCCGACAGTCTTCTACGGATGCGTATAAATCATCGTCGCCTCCGTTGATCGATTCTTCGCCTCCTCTTGTTGCTGGATTTTCAAGTCCTGCGCTTAAGAACAATATAAGGCTTTCATCGTCTCTTCAGGATCTTTCTGCTTACCGTAGACTTGATCTCGAAGAGGGTAATCATGGACTTGGGAGTGCAGCTTCTGATTTTAGACCGCCCCAGCGAGAGAATGCTGGCTCTAGTTTCTCGAAGGAGAAGGCATTGCCTGGAGGCTCCTCCCGGTGGCCGATCAAGAAGTTGGTGCGAACAATTGTTCTTTTTCTGTGTCTTTTGCTCGTTTGTTTTCTAATTTATACGGTTTCTATGTATATTTATTCATATTGGTCTCAAGGAACACCAAGATACTTTGTGGTGCTTGACTGTGGAAGTACTGGGACTCGAGCGTATGTATATCAAGCAAATATTAATTATAAGAAAGATGGAGCCCTTCCCATTGCCATCAGGTCATATACAGGACAGAAGAAGAAATCGAAGTCTCAGAGCGGACGGGCTTATGATCGAATGGAAACAGAACCAGGGCTTGATAAGTTGGTTCGTAACGTGACTGGTTTGAAGAAAGCGATTAAACCCCTGCTTCATTGGGCTGAGAAGCAGATTCCTAAGCGTGCCCATGAAAGCACTTCTCTTTTCCTCTATGCGACCGCTGGGGTTAGAAAACTACCACCTGCAGATTCGAAATGGATTCTGGACAATGCTTGGTCTATATTAAAGAGTTCGCGCTTTCTTTGCCAGAGAGAATGGGTTAAAACCATTACAGGTACAGAAGAGGCTTACTATGGATGGATTGCCCTTAACTATCAAAAACAATTGTTGGGGGTTAAACCAAGGGAACTAACATATGGGGCACTTGATTTGGGAGGGTCTTCCTTGCAAGTAACTTTTGAAAGCAAGGAACGAAATGAGTCGAGTTTGAACATTAGAATTGGAAATGTTGATTATCATCTTAATGCTTATTCGCTTACCGGGTATGGTTTAAATGATGCATTTGGGAAGTCTGTTGTCCACCTATTAAGAAGGATTCAAGAACATGAAAAGCTAGACTTGTCTAAATTTAAACTTAACCACCCTTGCCTGCATTCTGGGTACAATGAGAAGTATACCTGTAACCAGTGTGGAAAATTGTTGGGTAGAGGAGGTAATTCAGGAATTTCTCTAAGGCTGATTGGTGCTCCGAATTGGGAAGAATGTTCTGCACTTGCTAAAGTTGCAGTAAATTTTTCCGAATGGTCAAATACGAGTGCTGGACTTGATTGTGATGTGCAACCATGTGCCATAACTAATGACTACCCTCCACCGTATGGGAATTTTTATGCCATTTCTGGTTTCTTCGTGGTGTTTCGATTTTTCAATCTGACTTCAGAGGCTGCACTTGATGATGTATTAGAAAAGGGTCACAAATTTTGTGAGAAACCTTGGGAAGTTGCACGGGCTAGTGTTGCTCCACAGCCCTTTATTGAGCAATACTGCTTTAGGGCACCATACGTAGTCTCGCTCCTTAGAGAGGGGTTGCATATTACTGATAAACAAATTATTATTGGTTCAGGGAGTACAACTTGGACTCTCGGGGTTTCACTGTTGGAGGGGGGGAAGACGTCTGCAGTTACAACCAGACTACAGCTCCATGGTTATAAATTTTTTAAAATGAAGATAGATCCTCTAATTCTTATCGTCGTTTTGTTCACGTCATTGTTTTTCCTGCTTTTTGCATTATCCTGTGTTGGTAGTGCAATACCTAGATTTTTTCGGAGACCCTATCTCCCAATTTTCCGGCATAATACTGTCTCTACCACATCTGTTCTAAACATTCCATCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAGTTCTGGGGATGGCAGAGTCAAGATGCCACTGAGTCCAACAGTTAAAGGCTCTCAAGAAAGACCCTTTGGCTTAGGACATGGCTTTGGCAGCAGTAGTGGCATCCAACTTATGGAGTCATCCTTGCACCGGTCATCCAGCAGTATGGTCTCGCATAGCTATTCTTCAAATAGTCTTGGCCAAATGCAATTTGACAGTAACAGCGTCGGTTCGTTCTGGACCCCACGTCGTAGTCAGATGCGCCTTCAAAGTAGACGTTCGCAATCTCGAGAGGATCTGTCATTGACGTCGGCTGAAACACACATGGTGAAGGTTTAG 2265 43.58 MVLGRFRDVFSFVASRLSGRQSSTDAYKSSSPPLIDSSPPLVAGFSSPALKNNIRLSSSLQDLSAYRRLDLEEGNHGLGSAASDFRPPQRENAGSSFSKEKALPGGSSRWPIKKLVRTIVLFLCLLLVCFLIYTVSMYIYSYWSQGTPRYFVVLDCGSTGTRAYVYQANINYKKDGALPIAIRSYTGQKKKSKSQSGRAYDRMETEPGLDKLVRNVTGLKKAIKPLLHWAEKQIPKRAHESTSLFLYATAGVRKLPPADSKWILDNAWSILKSSRFLCQREWVKTITGTEEAYYGWIALNYQKQLLGVKPRELTYGALDLGGSSLQVTFESKERNESSLNIRIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIQEHEKLDLSKFKLNHPCLHSGYNEKYTCNQCGKLLGRGGNSGISLRLIGAPNWEECSALAKVAVNFSEWSNTSAGLDCDVQPCAITNDYPPPYGNFYAISGFFVVFRFFNLTSEAALDDVLEKGHKFCEKPWEVARASVAPQPFIEQYCFRAPYVVSLLREGLHITDKQIIIGSGSTTWTLGVSLLEGGKTSAVTTRLQLHGYKFFKMKIDPLILIVVLFTSLFFLLFALSCVGSAIPRFFRRPYLPIFRHNTVSTTSVLNIPSPFRLQRWSPMSSGDGRVKMPLSPTVKGSQERPFGLGHGFGSSSGIQLMESSLHRSSSSMVSHSYSSNSLGQMQFDSNSVGSFWTPRRSQMRLQSRRSQSREDLSLTSAETHMVKV 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3071830 3075079 + CmaCh04G006040.1 Cma04g00604 291685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00604 754 Pfam GDA1/CD39 (nucleoside phosphatase) family 148 561 IPR000407 GO:0016787
Cma04g00604 754 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 82 712 IPR000407 GO:0016787
Cma04g00604 754 PANTHER APYRASE 7-RELATED 82 712 - -
Cma04g00604 754 Gene3D - 141 288 - -
Cma04g00604 754 MobiDBLite consensus disorder prediction 729 754 - -
Cma04g00604 754 MobiDBLite consensus disorder prediction 78 101 - -
Cma04g00604 754 Gene3D Exopolyphosphatase. Domain 2 289 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00604 Cma-Chr4:3071830 Cma13g00875 Cma-Chr13:7124492 1.91E-88 dispersed
Cma16g00502 Cma-Chr16:2557729 Cma04g00604 Cma-Chr4:3071830 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00604 - - csv:101219987 1241.1