Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00642 ATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCTCAGTGGCTGCAATTGCCAGCTTCGGAACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCTATATATCTCGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA 885 44.86 MMSSSNMGLRFLSYPQRNLLMKLSSMPSVAAIASFGTIKRAMACRRVRCHLNLDDSSSKKRQLERVCSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGKVADPTVNDKQTDSIRRLNKKIMEDDRVGISIVPIGDGMTICQKR 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3286773 3290407 - CmaCh04G006420.1 Cma04g00642 291723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00642 294 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 77 294 IPR002935 GO:0008171
Cma04g00642 294 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 69 294 - -
Cma04g00642 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 294 IPR029063 -
Cma04g00642 294 CDD AdoMet_MTases 137 242 - -
Cma04g00642 294 Pfam O-methyltransferase 95 293 IPR002935 GO:0008171
Cma04g00642 294 PANTHER O-METHYLTRANSFERASE-RELATED 69 294 - -
Cma04g00642 294 Gene3D Vaccinia Virus protein VP39 68 294 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00642 Cma-Chr4:3286773 Cma19g00604 Cma-Chr19:6614743 4.14E-49 dispersed
Cma04g00642 Cma-Chr4:3286773 Cma11g01751 Cma-Chr11:11628039 1.59E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00642 - - csv:101219267 471.47