Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00663 ATGGTTTTTCCAACTTCTATATTCACGATTCTCGGTGTTCTTCTTCTCTGGATTTTGATAATCCAGGGATTTGGATCCCACGCTCAGTTTTTGCCCGAAGCCGAAGTGAAAGCCCTTCAAACAATATCTTCGAAACTTAAGAATTTAAGCTGGAATGTTACCCGGACTTCTTGCATTCAAGGTGAAGGCTTTTCCAATGGAGCTTTCCCGGGAAACCAAATCATGAGGAATGTCTCATGCAATTGTACTTCCACTGTTTGCCATGTGACAATCATCCTGCTTAAGGGTCTCAATCTAACAGGAACTTTTCCAGATGAATTTGGTAATCTTACGCATCTGAAGGAACTTGATCTTACTCGCAACCATATTAATGGCCAACTACCCACTAGTCTTGCCAATGCTCCTCTTGTCAAACTTTCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACCCTTGAAGAGCTGGTCTTGGAAGACAACCTGTTAACTGGAAATCTACCTCCCAACCTTGGAAATCTGAACCGTTTGAACAGACTGCTTCTGTCCGCAAACAATTTCACAGGAAGAATACCAGACTCATTCGGAAAATTAAAGAACTTGGTTGATTTTAGGATAGATGGGAATGGAGTGTCTGGGAAGATTCCTGAATTCATTGGGAATTGGATCAACCTTGACAGACTGGATATTCAAGGAACATCAATGGAAACCCCCATTCCTTCTACAATTTCTCAATTGAAGAACCTAACTCAATTGAGGATATCTGATTTGAAGGGATCATTTATAAGTTTCCCCAATTTGACAGATCTGATAAATATGGAAGAATTGGTCCTGAGGAACTGTTTAATTAATGGTTCAATCCCTCAGTATATTGGAGAAATGAATAAATTATCAACTCTGGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCAGCGACATTTCAGAATCTGATCAAGAGAAAGATAGACTTCATGTTTCTCACAAACAACTCACTGAGTGGTGAAGTGCCCGGTTGGATTTTGAGGAGCAAAAAGAACATAGATTTGTCTTACAACAATTTTTCAGGGTCTACTCTTGCTAGTTGCCAACAGTCACCTGTGAACTTGGTAGCCAGTTACCCACCTGCAGCGAATCATCAAGTTCCTTGGTGCCTCAAGAAGGACCTTCCATGCTCCGGAAAAGCTGAATATCATTCCTTGTTTATTAATTGTGGAGGAACCAGATTGAGGGCTGATGGGCATGATTATGAAGAGGACTTAACTACAGAGGGCAAGTCAAATTTCTTTTCTGTTTCAGAAAAATGGGCTTATAGCAGTACAGGAGTTTTTCTGGGTGATGAAAATGCCGACTACTTAGCTACAAATAAATTAGGCCTGAATGTGAGTGGTCTTGGCTATAACCAAAATGCCCGTCTTTCCCCTCTCTCCCTCAAATATTATGGTCTCTGCCTGCGGAGCGGAAGCTACAATGTGAAGCTCCACTTTGCTGAAATTATGTACTCTAATGATCAAACTTTTAGTAGCCTGGGAAAGCGTATATTCGATATATCAATTCAAGGAAAACTAGTCAAGAAGGATTTCAATATTGTGGAGGCAGCTGGGGGTGTGGGTAAGAACTTCACAGTGGAAGATAAAAATGTTTCTGTCAATGGCAGTACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACCACAGCAGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCAATCACAGTTACACCAAACTTTAAAATTGACGAGGGAGGACTATCAGCTGGAGCACTTGCCGGCATTATAATTTCTTCATGTGCAGTACTCATCATATTGGTCGTTGTATTTCTTTGGATGAAAGGTTACATCTGTAAGAAGGAAGTCCCAGCTAATGAACTTTCTGGCGTAGATTTACAAACGGGTCATTTTACATTGAAACAAATTAAAGCTGCCACCAACAACTTTGATCCTAAAAGTAAAATAGGCGAAGGTGGATTTGGGCCTGTCTATAAGGGTGTATTGTCTGATGGCGTTTTGATTGCTGTAAAGCAACTCTCCTCGAAATCGAAGCAAGGTAGCCGTGAGTTTGTCACTGAGATTGGGATGATATCTGCATTGCAACACCCAAACCTAGTTAAGCTCTTTGGCTGCTGTGTTGAGGGAAATCAATTGTTGCTAGTATATGAATACATGGAAAATAATAGTCTTGCCCGTGCGCTTTTCGGTCGGGAGGAACAAAGGCTACATCTTGACTGGCGAACAAGGAAGAAGATATGCTTGGAGATAGCTAGGGGGTTAGCATACCTTCATGAAGAATCAAGGTTGAAAATTGTTCATAGAGACATCAAGGCCACAAATGTGCTGCTCGACAAAGATCTTACTGCCAAGATTTCTGACTTTGGTTTGGCCAAGCTTGATGAAGAGGAGAACACCCACATCAGCACACGAATTGCTGGAACCATCGGTTATATGGCACCAGAGTATGCAATGAGAGGATACTTGACAGACAAGGCAGATGTTTACAGCTTTGGAATTGTTGCTTTAGAGATAGTTAGCGGAAAAAGTAACACAAATTACAGGCCGAAGGAAGAGTTCGTCTATCTTCTTGATTGGGCCTATGTACTGGAAGAACAGGGTAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAATTACTCATCAGAGGAAGCAATGAGGATGCTGAACATAGCTCTGTTATGCACCAACCCATCTCCCACGCTCAGGCCAACCATGTCTTCCGTGGTGAGTATGCTTGAAGGCAATATTCCAGTCCAAGCTCCCATCATCAAGCGCACTGCATCAGGCCAACATCCAAGGTTTAAAGCGTTTGAGATGCTCTCACACGAAAGCAGATCGCAGATTTCAAGCTCAACGTTTTCGGGAGAAGCTGCTGAGGCTCAGAAAAGCATGTTAATGGATGGGCCATGTACGGATTCCGCAGTATCCACTGACAGCAATGACAAGAATCTCTACCACTCTGCATCCAGTGATCCCATCCAAAATCATCGTCGTGTTGATGATCTCAAACCGTCAGATAAGACAAAGAATGATAACAACAATGACATCATTGAAGAAACAAAAAGTTGCACTCTCTCGATATCCATAAAAGTTCAGCCACTGTTGCATATGGATTATCTCATCAGCTCATTCAGCATTTTATCTATGACTTATGAGCCAAAGATTGAAGACAAAGCAACTCATGCATATACGACACTAACAGTAGAATTTCAGGGAAAATTAAAATTTGAAAAAAGAATAATAATGGTGATGGTGGAAGGGAGCAGAGCCAGTCACGCTCACCTTGATCATGATCCCAATGTCACAGTTCTCTCACCCAGGATTTGCAGGTAA 3402 41.92 MVFPTSIFTILGVLLLWILIIQGFGSHAQFLPEAEVKALQTISSKLKNLSWNVTRTSCIQGEGFSNGAFPGNQIMRNVSCNCTSTVCHVTIILLKGLNLTGTFPDEFGNLTHLKELDLTRNHINGQLPTSLANAPLVKLSLLGNRLNGSIPKEIGDIGTLEELVLEDNLLTGNLPPNLGNLNRLNRLLLSANNFTGRIPDSFGKLKNLVDFRIDGNGVSGKIPEFIGNWINLDRLDIQGTSMETPIPSTISQLKNLTQLRISDLKGSFISFPNLTDLINMEELVLRNCLINGSIPQYIGEMNKLSTLDLSFNHLTGPIPATFQNLIKRKIDFMFLTNNSLSGEVPGWILRSKKNIDLSYNNFSGSTLASCQQSPVNLVASYPPAANHQVPWCLKKDLPCSGKAEYHSLFINCGGTRLRADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDENADYLATNKLGLNVSGLGYNQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFSSLGKRIFDISIQGKLVKKDFNIVEAAGGVGKNFTVEDKNVSVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFKIDEGGLSAGALAGIIISSCAVLIILVVVFLWMKGYICKKEVPANELSGVDLQTGHFTLKQIKAATNNFDPKSKIGEGGFGPVYKGVLSDGVLIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLFGCCVEGNQLLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLTAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSNYSSEEAMRMLNIALLCTNPSPTLRPTMSSVVSMLEGNIPVQAPIIKRTASGQHPRFKAFEMLSHESRSQISSSTFSGEAAEAQKSMLMDGPCTDSAVSTDSNDKNLYHSASSDPIQNHRRVDDLKPSDKTKNDNNNDIIEETKSCTLSISIKVQPLLHMDYLISSFSILSMTYEPKIEDKATHAYTTLTVEFQGKLKFEKRIIMVMVEGSRASHAHLDHDPNVTVLSPRICR 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3376579 3386871 + CmaCh04G006630.1 Cma04g00663 291744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00663 1133 Gene3D Ribonuclease Inhibitor 34 158 IPR032675 -
Cma04g00663 1133 Pfam Malectin domain 408 589 IPR021720 -
Cma04g00663 1133 SUPERFAMILY Protein kinase-like (PK-like) 647 966 IPR011009 -
Cma04g00663 1133 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515
Cma04g00663 1133 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 67 997 - -
Cma04g00663 1133 MobiDBLite consensus disorder prediction 990 1038 - -
Cma04g00663 1133 CDD STKc_IRAK 670 937 - -
Cma04g00663 1133 PANTHER - 67 997 - -
Cma04g00663 1133 Gene3D Ribonuclease Inhibitor 268 376 IPR032675 -
Cma04g00663 1133 Gene3D Ribonuclease Inhibitor 159 267 IPR032675 -
Cma04g00663 1133 MobiDBLite consensus disorder prediction 1016 1038 - -
Cma04g00663 1133 Pfam Protein tyrosine and serine/threonine kinase 667 934 IPR001245 GO:0004672|GO:0006468
Cma04g00663 1133 Gene3D Phosphorylase Kinase; domain 1 631 739 - -
Cma04g00663 1133 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma04g00663 1133 SUPERFAMILY L domain-like 75 324 - -
Cma04g00663 1133 Gene3D - 405 594 - -
Cma04g00663 1133 ProSiteProfiles Protein kinase domain profile. 664 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma04g00663 1133 MobiDBLite consensus disorder prediction 993 1015 - -
Cma04g00663 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Cma04g00663 1133 Gene3D Transferase(Phosphotransferase) domain 1 740 943 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01260 Cma-Chr1:9059597 Cma04g00663 Cma-Chr4:3376579 0 dispersed
Cma04g00663 Cma-Chr4:3376579 Cma19g01059 Cma-Chr19:8910273 0 dispersed
Cma04g00663 Cma-Chr4:3376579 Cma01g01261 Cma-Chr1:9083769 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68474 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00663 - - csv:101211151 1808.88