Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00664 ATGACGTCGGGGACGAGGCTACCAACATGGAGGGAGCGGGAGAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATAGCGGCTAAGATCTTCGCTGGACTCAGGATGTATGGCAACTACAAGCTTCCCAAGCATTGCGATAACAATGAGGTGCTTAAAGCTCTCTGCAACGAGGCAGGATGGACCGTCGAACCTGATGGTACCACTTATCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGCGGATCGGCATCCGCAAGTCTGTACGCATCTCACCAACCAAGTCCTTGTGCTTCATTCAATCCAAGCCCCGGCTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTCGCTAATTTGAATGCTGATGGCAATTCACTAATCCCATGGCTCAAAAACCTTTCATCTTCATCATCTTCGGCATCCTCATCTAAACTTCCCAATCACTATATTCATGGCGGTTCCATCAGTGCACCTGTTACTCCTCCTCTGAGTTCCCCAACTGCTCGAACACCCCGACTGAGAGCCGACTGGGAGGACCAGTCTGTACTTCCAGGATGGAGTACACACTATAATTCCTCCCTGCCATCTTCTACTCCTCCAAGTCCTGGACGTCAGATTGTTCCCAATCCAGAATGGTTTGCTGGCCTTAGGATTCCTCAGGGTGGGCCCAATTCTCCAACATTTAGTCTTGTTTCTACTAACCCATTTGGTTTCAAGGAAGCAGCAATGAATGGTGGAGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCCCCTGCCATTGCAGCAGGATCCGATCACACCGCAGATATTCCAATGTCAGAAGTGATCTCTGATGAGTTCGCATTTGGAAGCAATGCCGCAGGAATTGTGAAGGCATGGGAAGGAGAACGGATTCATGAAGAATGTGGTTCAGATGACCTAGAGCTGACTCTTGGGAACTCAAGGACCAGGTAA 981 49.64 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSASASLYASHQPSPCASFNPSPGSSSFPSPASSSYVANLNADGNSLIPWLKNLSSSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLRADWEDQSVLPGWSTHYNSSLPSSTPPSPGRQIVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMNGGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKAWEGERIHEECGSDDLELTLGNSRTR 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3386282 3389087 - CmaCh04G006640.1 Cma04g00664 291745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00664 326 MobiDBLite consensus disorder prediction 158 180 - -
Cma04g00664 326 MobiDBLite consensus disorder prediction 98 118 - -
Cma04g00664 326 MobiDBLite consensus disorder prediction 1 20 - -
Cma04g00664 326 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Cma04g00664 326 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 326 - -
Cma04g00664 326 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00664 Cma16g00445 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00664 Cma-Chr4:3386282 Cma13g00580 Cma-Chr13:5806691 1.16E-134 dispersed
Cma16g00510 Cma-Chr16:2617685 Cma04g00664 Cma-Chr4:3386282 2.93E-16 wgd
Cma16g00431 Cma-Chr16:2148810 Cma04g00664 Cma-Chr4:3386282 2.66E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34789 PF05687 BES1_N 3.70E-65 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00664 - - csv:101210002 575.859