Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00715 ATGAACCCAAATTCAGGAATGGAGGCGAATACGACGGTAGCCATAAACTGTCCGTCAGAGATGAAAGCAACGTCAAATGGAGTATTTCAAGGCGACAATCCGCTTGATTTCGCTCTTCCTTTGGCGATTCTTCAAATATGTTTGGTGGTCATTCTCACTCGTGTTCTTGGTTTGCTTTTCCGACCACTCAGACAACCTCGTGTCGTTGCAGAGATCGTTGGCGGAATATTGCTGGGACCATCAGCGGTGGGTCGGAGCCATGAATTTCTACACGCAGTGTTCCCAGAGAGAAGCCTAACAATGTTGGACACGTTGGCCAATCTGGGTCTGCTCTTCTTCTTATTTCTAGTTGGACTCGAGCTGGATCCCAAGTCCCTCCGCCATACCGGAAAGGCCGCCATGGGCATCGCCGTCGCCGGAATCACCGTCCCCTTCCTCCTCGGCATCGGCACCTCCTATGTCCTCCGTTCCACCATCTCCCAAGGCGTCCATGCCCCTCCCTTCCTTATATTCATGGGCGTAGCTCTCTCCATCACCGCCTTCCCTGTCCTGGCCCGTATTCTGGCCGAGCTCAAGCTTTTAACCACTAACGTCGGCCGAATGGCCATGTCCGCCGCCGCTGTCAACGATGTCGCCGCCTGGATCTTCCTCGCTCTCGCCATCGCCCTCTCCGGTACTGGCCGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTCTTTGGGTTTGCTTTTGTCCTGTTCTGCTTCTTCACTCTGCCGCCCATTTTCCGCTGGATGTCCTGTCGCTGCTCCGACGGCGAACCCATCAGCGAACTCTATATTTGCGCCACCTTATCCATCGTCCTCGCCGCCGGATTCTTCACCGATTTAATCGGAATACACGCCCTCTTTGGCGCCTTCGTTGTCGGCGTTCTTGTACCAAAAGAAGGCCCACTAGCCGGCGCTCTCGTCGACAAAGTCGAAGGTCTGGTCTCCGGTCTCTTCCTCCCTCTTTATTTCGTTTCTAGCGGATTGAAAACCAACATCGCCACCATCAAAGGCGTCCAATCGTGGGGTCTCCTCGTTCTCGTCGTTTTCACCGCTTGTTTCGGGAAAGTCCTGGGCACCATCGCCGTCGCACTCTTCTACAAAATGCCATTCCAAGAATCAATCGCTTTAGGATTCTTGATGAACACGAAAGGGCTCGTGGAATTAATCGTCCTCAACATCGGGAAAGACAGAAAAGTTCTGAACGATCAAACTTTTGCAATTCTCGTTCTAATGGCTATCATCACAACCTTCATCACAACCCCAATCGTGATGGCGGCTTACAAACCGGCAAAGAGAAAAAGCAAATCTGAATACATAAACAGAACAATTGAGCGTGAGGATCCCAATTCAGAGCTGCGGATTTTGGCTTGTTTTCACTCTGTTACCAACATTCCTTCGGTTTTAAACTTGATTGAGGCGTCTCGTGGGGCGGAAGGAAAAGAATGGGTTGGGCGCCGGGTTTGCGTTTATGCTATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCCATTTTTATGGTCCACCGAGCTCGGAAGAATCAGCTTCCGTTCTGGAATAAAGGGGGGAAGGCCGATTCGGATCAAATCGTGGTGGCTTTTGAGGATTTTGAGCAGCTTAGTCGGGTGTCTATACGTCCAATGACGGCCATATCTCCACTATCTAGCATTCATGAGGATGTCTGCAACAGCGCCGAGCGGAAACGAGCAGCCATTATCATCCTCCCATTCCACAAACACCAAAGCGCTAGCAACGTCTCTTCCACCATAACCATCTTCTTCTTCGGCGGCCGTGATGACCGTGAAGCACTAGCCTACGGTCGGAGAATGGCCGAACATCCCGGAATAATGCTAAACGTTATCCGCTTCCTTCCAAGCCCCGACATGGTGGTAGAATCCATTGTGGTTGACATTAACAAATACGACACAAATGATGTTTCAGCAGGCATAGATGAGAGGGTACTGTCGGAGTTGAAGAAAACAGAGGAGAAGTCGATTAAATATGAAGAGAGGGTTGTGAGCAATAGCTGCGACGCCATTGATGTAATGAGGGAGTTTGGTAGATGCCATTTGATATTGGTGGGTCGAATGCCAGAAGGGCGAGTAGTGGAGAGCTTTCATTTGAAGAGTGTGGAATGTCCTGAGTTGGGGCCAATTGGGAGCTTGTTCACATCGCCAGAGCTCCTCACATCAGCATCCCTGTTGGTGATTCAACAGTTTCGTGGTCCCTTGTCTTCTTTTTCCACATCTGCAATGGTTTTGCCTGAGGAGGGAGGAATCTTGCTGGGTCCATCGGCGCTTGGCCGAAACTTTAACTACTTACACACAATCTTCCCGGCGAAGAGCCTCACCGTATTGGATACGTTGGCCAACTTGGGTCTTCTCTTCTTCCTCTTTCTCGTCGGCTTGGGGTTGGACCCCAAATCGCTCCGCCGTACCGGAAAACGAGCAATGTGCATTGCCTTCGCTGGAATTACCCTTCCGTTCATCATCGGCATTGGCACCTCTATAATTCTCCGATCAACCATTTCCAAAGGTGTCAATGAAGCCGCTTTTCTTGTCTTCATGGGTGTCGCTCTTTCAATCACTGCATTTCCCGTTCTGGCGAGAATTTTGGCTGAGCTCAAGCTTTTGACCACTGACGTCGGTCGCATGGCCATGTCTGCTGCCGCTGTCAATGACGTGGCGGCGTGGATTCTTCTAGCGTTGGCAATTGCACTCTCCGGCACTGGCAACTCCCCTCTTGTTTCCCTTTGGGTTTTCTTGTTTGGCTCTGGTTTTGTCCTGTTTTGTATCTTTTTCTTTCCGCCGGTGTTCCGGTGGATGTCGCAACAGTGCTCTGAGGGTGAGCCGGTGAAGGAACTGTACATTTGTGCCACTTTGTCGATTGTTTTGGCTGCTGGGTTCGTCACAGATTTGATCGGAATCCATGCCCTATTCGGAGCTTTCATCATAGGCGTACTGGTTCCTAAAGAAGGCCCATTCGCCGGAGCTCTGGTTGAGAAAGTTGAAGATCTCGTCTCTGGTCTTTTTCTTCCACTATACTTCGTTTCAAGCGGATTAAAAACAAACGTGGCAACAATTAAAGGAGCTCAATCATGGGGTCTTCTTGTTTTAGTCATTTTCAACGCCTGTTTTGGTAAAATCGTCGGAACTGTTTCCATTGCCATGTTCTGCAAAGTTCCATTAAAAGAATCATTGGTTTTGGGGTTTTTGATGAACACGAAAGGCCTACCCGAATTAATCGTTTTAAACATCGGCAAAGATAGAAAGGTTTTGAACGATCAGACATTTTCGATTATGCTGCAGCAGTGA 3339 49.99 MNPNSGMEANTTVAINCPSEMKATSNGVFQGDNPLDFALPLAILQICLVVILTRVLGLLFRPLRQPRVVAEIVGGILLGPSAVGRSHEFLHAVFPERSLTMLDTLANLGLLFFLFLVGLELDPKSLRHTGKAAMGIAVAGITVPFLLGIGTSYVLRSTISQGVHAPPFLIFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWIFLALAIALSGTGRSPLVSLWVFLFGFAFVLFCFFTLPPIFRWMSCRCSDGEPISELYICATLSIVLAAGFFTDLIGIHALFGAFVVGVLVPKEGPLAGALVDKVEGLVSGLFLPLYFVSSGLKTNIATIKGVQSWGLLVLVVFTACFGKVLGTIAVALFYKMPFQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPIVMAAYKPAKRKSKSEYINRTIEREDPNSELRILACFHSVTNIPSVLNLIEASRGAEGKEWVGRRVCVYAMHLMELTERSSAIFMVHRARKNQLPFWNKGGKADSDQIVVAFEDFEQLSRVSIRPMTAISPLSSIHEDVCNSAERKRAAIIILPFHKHQSASNVSSTITIFFFGGRDDREALAYGRRMAEHPGIMLNVIRFLPSPDMVVESIVVDINKYDTNDVSAGIDERVLSELKKTEEKSIKYEERVVSNSCDAIDVMREFGRCHLILVGRMPEGRVVESFHLKSVECPELGPIGSLFTSPELLTSASLLVIQQFRGPLSSFSTSAMVLPEEGGILLGPSALGRNFNYLHTIFPAKSLTVLDTLANLGLLFFLFLVGLGLDPKSLRRTGKRAMCIAFAGITLPFIIGIGTSIILRSTISKGVNEAAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGNSPLVSLWVFLFGSGFVLFCIFFFPPVFRWMSQQCSEGEPVKELYICATLSIVLAAGFVTDLIGIHALFGAFIIGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGAQSWGLLVLVIFNACFGKIVGTVSIAMFCKVPLKESLVLGFLMNTKGLPELIVLNIGKDRKVLNDQTFSIMLQQ 1112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3619731 3625129 + CmaCh04G007150.1 Cma04g00715 291796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00715 1112 PANTHER CATION/H + ANTIPORTER 588 755 - -
Cma04g00715 1112 Pfam Sodium/hydrogen exchanger family 767 1109 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma04g00715 1112 Pfam Sodium/hydrogen exchanger family 47 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma04g00715 1112 Gene3D - 750 1111 IPR038770 -
Cma04g00715 1112 Gene3D - 41 446 IPR038770 -
Cma04g00715 1112 PANTHER CATION/H(+) ANTIPORTER 17 766 1109 - -
Cma04g00715 1112 PANTHER CATION/H(+) ANTIPORTER 17 16 589 - -
Cma04g00715 1112 PANTHER CATION/H(+) ANTIPORTER 17 588 755 - -
Cma04g00715 1112 PANTHER CATION/H + ANTIPORTER 766 1109 - -
Cma04g00715 1112 PANTHER CATION/H + ANTIPORTER 16 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00715 Cma-Chr4:3619731 Cma16g00568 Cma-Chr16:2924699 0 dispersed
Cma16g00567 Cma-Chr16:2919666 Cma04g00715 Cma-Chr4:3619731 2.10E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00715 - - csv:101203169 1157.13