Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00767 ATGGCTCCGTCAACAAGCTTTGTCTTTGTTTTTGTTCTTCTTGCTCTGTCTTCGGTTTGTTTCTCTCACAGACCTGGCGGCGGCGGCGATGGTTATGGTTATGGCGGTTATTTGTACCCTCAATTCTATGACCATTCTTGTCCAATGGCTCAAGACATTGTGAAGTCCATTGTGGCTAAGGCTTTTGCTAAGGAACCTCGGATTGCTGCTTCATTGATTAGGCTTCATTTCCATGATTGTTTCGTCAAGGGCTGTGATGCTTCACTGTTGTTAGATAGCAGTGGGAAAATTGCTAGCGAAAAAAGGTCCAATCCAAATAGGAACTCTGCTAGAGGATTTGAAGTGATTGATGAGATCAAATCTGCCTTAGAAAAAGAGTGTCCACAAACTGTTTCTTGCGCTGATATTTTGGCCATTGCTTCAAGAGACTCCACCGTCATAACAGGAGGGCCCAGTTGGGAAGTCCCGCTAGGAAGGAGGGACTCGAGAGGAGCAAGTCTAAGTGGGTCTAACAATCACATCCCAGCTCCAAACAACACATTCCAAACCATTCTCACAAGATTCATGAGACAGGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACTATTGGAAACTCTCGATGCACTAGCTTCAGGCAACGGCTTTACAACCAATCTGGCAATGCTGAGCCTGACCCTTCACTCGATCCATCGTACGCTGCTGAATTGCGCAGACGATGCCCAAGATCAGGGGGTGATCAGAACCTCTTTTTCTTGGACTTTGTCAGCCCGACCAAATTTGACAACTATTACTTCAAGAACCTTTTGGCTGGAAAGGGTTTGCTAAACTCAGATCAAGTCCTCTTGACAAAGAACCAACAATCAGCGGAGTTGGTGAGGACATATGCAGAGAATTCAGAGCTCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGGAACATTTCTCCTCTCACAGGTTCAAGGGGAGAGATCAGAAAGAACTGCAGGAGAGTAAACAAGAATTAG 1023 45.26 MAPSTSFVFVFVLLALSSVCFSHRPGGGGDGYGYGGYLYPQFYDHSCPMAQDIVKSIVAKAFAKEPRIAASLIRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIASRDSTVITGGPSWEVPLGRRDSRGASLSGSNNHIPAPNNTFQTILTRFMRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAEPDPSLDPSYAAELRRRCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAGKGLLNSDQVLLTKNQQSAELVRTYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKNCRRVNKN 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3896086 3897619 + CmaCh04G007670.1 Cma04g00767 291848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00767 340 PANTHER PEROXIDASE 5 338 - -
Cma04g00767 340 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Cma04g00767 340 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 CDD secretory_peroxidase 40 337 IPR033905 GO:0004601|GO:0042744
Cma04g00767 340 Pfam Peroxidase 54 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PANTHER PEROXIDASE 72-RELATED 5 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 Gene3D Peroxidase, domain 2 175 318 - -
Cma04g00767 340 SUPERFAMILY Heme-dependent peroxidases 38 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Cma04g00767 340 Gene3D - 42 338 - -
Cma04g00767 340 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00767 340 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00716 Cma-Chr3:5790882 Cma04g00767 Cma-Chr4:3896086 0 dispersed
Cma04g00767 Cma-Chr4:3896086 Cma08g01288 Cma-Chr8:7797609 7.88E-110 dispersed
Cma19g01104 Cma-Chr19:9131066 Cma04g00767 Cma-Chr4:3896086 3.47E-72 dispersed
Cma20g00050 Cma-Chr20:223326 Cma04g00767 Cma-Chr4:3896086 8.26E-95 dispersed
Cma18g00288 Cma-Chr18:1529480 Cma04g00767 Cma-Chr4:3896086 4.98E-86 transposed
Cma04g00815 Cma-Chr4:4177279 Cma04g00767 Cma-Chr4:3896086 1.02E-99 transposed
Cma16g00634 Cma-Chr16:3271830 Cma04g00767 Cma-Chr4:3896086 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00767 K00430 - csv:101223204 582.793