Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00815 ATGTTCTCTCTCTTCCTCCTCCCTCTCTTCTTCCACTTCCCATCCGTTTCTCCGGCCAAACTCCGCCCCGAATACTACGCCGAGTCATGCCCTCACGCGGAATCCATCGTCCGGACTGTGATGCACAAAGCTCTGATCAGAGAGCCTCGAAGTGTTGCCTCTGTTATGCGCTTCCAATTTCACGATTGCTTTGTTAATGGCTGTGATGCTTCTATGTTGCTGGATGATACACCGACAATGCTTGGAGAGAAACTCTCTCTCTCGAACATTAATTCGCTTAGATCTTATGAAGTTGTTGATGAAGTGAAGGAGGCGTTGGAGAAGGCCTGTCCTGGAATCGTCTCGTGTGCAGATATCATTATCATGGCGTCTAGAGATGCCGTTGCTCTGACAGGCGGCCCCAACTGGACAGTGAGATTAGGCAGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAAGCTCTCTCATTGACCTCTTCAACAAATACAACTTATCTGTTAAAGATCTGGTTTCTCTTTCAGGTTCCCACTCCATCGGCCAAGGCCGATGTTTCTCCATCATGTTTCGGCTCTACAACCAGTCTGGTACTGGGAGGCCAGACCCGGCCATCGAGCCGGGCTTCAGAGAAGAGCTCTTTAAGCAATGCCCTCAAGGTGGGGACGAAAATGTAACAATGAACCTTGACTCTACACCTTATATTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTCTTGAATTCTGATGAAACTCTCTATACATTTGCTGCAACTAGAAGGTATGTGAGGTACTTCAGCAAAAACCAAAGCGCGTTTTTTAACGCATTCGTGGAGGGTATGCTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAGGTTAGAAGGAATTGTAGGGTAGTCAATGGCCAGTCTGTGATCATATAA 972 48.35 MFSLFLLPLFFHFPSVSPAKLRPEYYAESCPHAESIVRTVMHKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKEALEKACPGIVSCADIIIMASRDAVALTGGPNWTVRLGRLDSLTASQEDSNQIMPSPRANASSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPGFREELFKQCPQGGDENVTMNLDSTPYIFDNQYFKDLVGGRGFLNSDETLYTFAATRRYVRYFSKNQSAFFNAFVEGMLKMGDLQSGRPGEVRRNCRVVNGQSVII 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4177279 4180133 + CmaCh04G008150.1 Cma04g00815 291896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00815 323 Gene3D - 24 317 - -
Cma04g00815 323 Gene3D Peroxidase, domain 2 158 298 - -
Cma04g00815 323 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cma04g00815 323 Pfam Peroxidase 37 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 SUPERFAMILY Heme-dependent peroxidases 21 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma04g00815 323 PANTHER PEROXIDASE 17 13 318 - -
Cma04g00815 323 CDD secretory_peroxidase 20 316 IPR033905 GO:0004601|GO:0042744
Cma04g00815 323 PANTHER PEROXIDASE 72-RELATED 13 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00815 Cma-Chr4:4177279 Cma03g00716 Cma-Chr3:5790882 1.82E-97 dispersed
Cma04g00815 Cma-Chr4:4177279 Cma16g00634 Cma-Chr16:3271830 2.74E-99 transposed
Cma04g00815 Cma-Chr4:4177279 Cma04g00767 Cma-Chr4:3896086 1.02E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00815 K00430 - csv:116406089 564.303