Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00815 | ATGTTCTCTCTCTTCCTCCTCCCTCTCTTCTTCCACTTCCCATCCGTTTCTCCGGCCAAACTCCGCCCCGAATACTACGCCGAGTCATGCCCTCACGCGGAATCCATCGTCCGGACTGTGATGCACAAAGCTCTGATCAGAGAGCCTCGAAGTGTTGCCTCTGTTATGCGCTTCCAATTTCACGATTGCTTTGTTAATGGCTGTGATGCTTCTATGTTGCTGGATGATACACCGACAATGCTTGGAGAGAAACTCTCTCTCTCGAACATTAATTCGCTTAGATCTTATGAAGTTGTTGATGAAGTGAAGGAGGCGTTGGAGAAGGCCTGTCCTGGAATCGTCTCGTGTGCAGATATCATTATCATGGCGTCTAGAGATGCCGTTGCTCTGACAGGCGGCCCCAACTGGACAGTGAGATTAGGCAGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAAGCTCTCTCATTGACCTCTTCAACAAATACAACTTATCTGTTAAAGATCTGGTTTCTCTTTCAGGTTCCCACTCCATCGGCCAAGGCCGATGTTTCTCCATCATGTTTCGGCTCTACAACCAGTCTGGTACTGGGAGGCCAGACCCGGCCATCGAGCCGGGCTTCAGAGAAGAGCTCTTTAAGCAATGCCCTCAAGGTGGGGACGAAAATGTAACAATGAACCTTGACTCTACACCTTATATTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTCTTGAATTCTGATGAAACTCTCTATACATTTGCTGCAACTAGAAGGTATGTGAGGTACTTCAGCAAAAACCAAAGCGCGTTTTTTAACGCATTCGTGGAGGGTATGCTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAGGTTAGAAGGAATTGTAGGGTAGTCAATGGCCAGTCTGTGATCATATAA | 972 | 48.35 | MFSLFLLPLFFHFPSVSPAKLRPEYYAESCPHAESIVRTVMHKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKEALEKACPGIVSCADIIIMASRDAVALTGGPNWTVRLGRLDSLTASQEDSNQIMPSPRANASSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPGFREELFKQCPQGGDENVTMNLDSTPYIFDNQYFKDLVGGRGFLNSDETLYTFAATRRYVRYFSKNQSAFFNAFVEGMLKMGDLQSGRPGEVRRNCRVVNGQSVII | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4177279 | 4180133 | + | CmaCh04G008150.1 | Cma04g00815 | 291896 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00815 | 323 | Gene3D | - | 24 | 317 | - | - | |
Cma04g00815 | 323 | Gene3D | Peroxidase, domain 2 | 158 | 298 | - | - | |
Cma04g00815 | 323 | PRINTS | Haem peroxidase superfamily signature | 52 | 66 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Haem peroxidase superfamily signature | 114 | 131 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Haem peroxidase superfamily signature | 132 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Haem peroxidase superfamily signature | 239 | 254 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | ProSiteProfiles | Plant heme peroxidase family profile. | 20 | 317 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - | |
Cma04g00815 | 323 | Pfam | Peroxidase | 37 | 282 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 317 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 30 | 49 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 54 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 94 | 107 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 113 | 123 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 132 | 147 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 179 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 237 | 252 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 253 | 270 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PRINTS | Plant peroxidase signature | 293 | 306 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g00815 | 323 | PANTHER | PEROXIDASE 17 | 13 | 318 | - | - | |
Cma04g00815 | 323 | CDD | secretory_peroxidase | 20 | 316 | IPR033905 | GO:0004601|GO:0042744 | |
Cma04g00815 | 323 | PANTHER | PEROXIDASE 72-RELATED | 13 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00815 | Cma-Chr4:4177279 | Cma03g00716 | Cma-Chr3:5790882 | 1.82E-97 | dispersed | |
Cma04g00815 | Cma-Chr4:4177279 | Cma16g00634 | Cma-Chr16:3271830 | 2.74E-99 | transposed | |
Cma04g00815 | Cma-Chr4:4177279 | Cma04g00767 | Cma-Chr4:3896086 | 1.02E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00815 | K00430 | - | csv:116406089 | 564.303 |