Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00918 ATGTCGATGGCCGCCACCTCCACCGCCATCCTCCGCCCCACCCCTTTTCTCGGCCAAAGCAGAGCCTCTTCCCACAACTCCCTCAGAGATGTCGTCGCCATGGGAACTCCAAAATACACCATGGGAAATGAACTGTGGTATGGACCAGACAGAGTAAAGTACTTGGGGCCCTTTTCCGCTCAGACTCCCTCCTACCTGAATGGAGAGTTCCCCGGCGATTATGGATGGGATACTGCTGGGTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGAGCCTTCGGGTGCATAACACCAGAAGTGCTAGAAAAATGGTTGAAAGTGGACTTCAAGGAGCCAGTCTGGTTCAAGGCCGGAGCCCAGATCTTCTCAGAAGGGGGGCTCGACTACTTGGGGAACCCCAACCTGGTGCACGCCCAGAGCATCCTAGCCGTTTTGGGTTTCCAAGTGGTCCTAATGGGGCTGGTTGAAGGGTTCCGCATCAACGGGCTGGACGGCGTGGGCGAAGGCAACGACCTGTACCCAGGGGGTCAGTACTTCGACCCACTCGGACTGGCCGACGACCCCGTCACCTTCGCCGAGCTGAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATCGTTACTGGGAAAGGCCCCCTCGAGAACCTTCTCGACCATCTCGATAACCCTGTGGCCAACAATGCTTGGGTTTACGCCACCAAGTTTGCCCCTGGCTCATAA 795 57.36 MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4748020 4749246 - CmaCh04G009180.1 Cma04g00918 291999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00918 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Cma04g00918 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Cma04g00918 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 264 IPR001344 GO:0009765|GO:0016020
Cma04g00918 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
Cma04g00918 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00918 Cma-Chr4:4748020 Cma11g01288 Cma-Chr11:8614659 4.05E-124 dispersed
Cma16g00808 Cma-Chr16:4464485 Cma04g00918 Cma-Chr4:4748020 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00918 K08914 - mnt:21401705 514.612