Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00942 ATGATTCAAGAACCTTCCGGCATGCAATTCCCAATGCTCTGCCCCAGAGATTTGATCTCTGTTTCCCTTTTTATTTCTCTTCTTCTTGTTTCCAATTTATCTCCCTGTTCCGCACAAGACTACATCATAGGCGACCCTGGAGCAGCTGGCGGAGCAGGCGGCGGAGCAGTCGGCGGAGATGATGGCGATGATACGAAGGTGAAGCCGGCTGCGGGACCGCCAGAGCACAACAACTGTAATGGCATATTCTTGACCTACAATTTCATTTCGCGTGAGAAGGAGCTGCCCCGGTTAAAGAATGCGACGGCTCAGGCTTGGGCCTTTAAATCGGAGGCGACAATTCTGAACTCCGGATTGACTGAGCTCAAGGGCTGGAAGATGTTCATCGGATTTCACCACCACGAGATTCTCGTCTCCGTCGACGGCGCCGTCCTGTTGGATGGCTCGGATTTCCCTGCGGACGTTGGAAAAGGAGTCACTTTGGCTGGGTATCCGATGACCGATCTTAAAACGTCCATTGAAACCGCCGGTGATATTAATCAGATCCAAGTGACGGCTGCGATCACCGGATCACAATTTGGCATCAAGCCGCCTGGTGTTCCAATGCCTAAGACAATTCGCCTCGTTAACGATGGATATAAGTGCCCTGCCCCTCGTCTTCGTGGGAAAAGAACAATGCATGTATGCTGCAAAAAAGATCCAAAGTTCAAGGAGAAAAAAGCACCCAAGGCCAAGAAAATCAAATTTCTGGCTCGGCAAAATGGAGATCTCTCACTAACGTACGATGTGATGCAATCTTTTGGAAACAACTATCTAGCTCAAGTCACAATCGACAACAACAACCCACTGGGGCGCTTGGATCACTGGAACTTAACCTGGGAATGGATGAAAGGAGAGTTCATTCAAAGCATGAGAGGAGCATACACTCATACAAGAGACATAGCTCAATGCATCTACGGCCCCGCAGGCCAATATTATCAAGATTTCGACTTCACCGGCGTCATGAGTTGCGATACGAACCCGGTGATGGCTGATCTACCAGCGCAACGGAAGGACGATCCCAAGATCGGAAAGTTGCCATATTGCTGCAGGAATGGAAGCTTGTTGCCTACCATGATGGATGAAAGCAAAGCAAGGTCTATTTTTCAGCTACAAGTCTTCAAGCTTCCACCAGACATGAACCGAACGGCTCTTACTCCACCACAGAAATGGAAGATCTCAGGTATCCTGAATCCGGAATATGTATGTGGCGCTCCGATCCGAGTCGTGCCGACCGAGTTTCCAGACCCAAGCGGGCTTCAATCAACGAGCACGGCGATCGCTAGTTGGCAAGTTGTATGCAACATTACAAAGCCAAAAGTGAAGCAATCAAAATGTTGTGTTTCATTCTCAGCATATTATAATGACTCAGTAATTCCTTGCAATACTTGTGCGTGTGGGTGTGAAGACACTGATACTTCTACTTGCAATCCAAATGCACGCTCAATGCTGCTCCCTCCAGAAGCCCTTTTGGTGCCATTTGATAACAGGACAAAGAAGGCAAGGGCTTGGGCTAAAATTAAGCACTACCCAAATCCAAAGACGCTGCCTTGTCCTGATAACTGTGGAGTTAGTCTGAATTGGCATATTAACTCCGACTATGCCGATGGATGGACTGCAAGACTCACACTTTTCAACTGGGAAGATTACCCATTTGAGGATTGGTTCACTGCCGTTCAATTGGGTAAGGCCGGCCGGGGTTACGAAAATGTTTACTCCTTCAATGGAACCAGGCTTCCCAACGTTAAAAATACCATCTTTCTCCAAGGCTTGCCTGGCTTGACTTACTTGATGGGAGAGGTGAATGGGACCAATCCCACATCGGATCCGAGAATTCCAGGAAAGCAGCAGTCCGTGATCTCTTTTAAGAAGAAGGGCCTACGCGACCTGGACATACAACGAGGCGATGGCTTCCCTATTAAAGTGTTTTTCAACGGCGAGGAATGTGCGCTTCCAAGGGCGATTCCCTTGCCCAGTTCTGCCTGCCACTGTCCCTACAGTGTCATGCGCCTCGTCTTCATCTTGGCTGTTACTTTGGCACTTATAACAGATCGCTTCCATTGA 2103 48.6 MIQEPSGMQFPMLCPRDLISVSLFISLLLVSNLSPCSAQDYIIGDPGAAGGAGGGAVGGDDGDDTKVKPAAGPPEHNNCNGIFLTYNFISREKELPRLKNATAQAWAFKSEATILNSGLTELKGWKMFIGFHHHEILVSVDGAVLLDGSDFPADVGKGVTLAGYPMTDLKTSIETAGDINQIQVTAAITGSQFGIKPPGVPMPKTIRLVNDGYKCPAPRLRGKRTMHVCCKKDPKFKEKKAPKAKKIKFLARQNGDLSLTYDVMQSFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMKGEFIQSMRGAYTHTRDIAQCIYGPAGQYYQDFDFTGVMSCDTNPVMADLPAQRKDDPKIGKLPYCCRNGSLLPTMMDESKARSIFQLQVFKLPPDMNRTALTPPQKWKISGILNPEYVCGAPIRVVPTEFPDPSGLQSTSTAIASWQVVCNITKPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDTDTSTCNPNARSMLLPPEALLVPFDNRTKKARAWAKIKHYPNPKTLPCPDNCGVSLNWHINSDYADGWTARLTLFNWEDYPFEDWFTAVQLGKAGRGYENVYSFNGTRLPNVKNTIFLQGLPGLTYLMGEVNGTNPTSDPRIPGKQQSVISFKKKGLRDLDIQRGDGFPIKVFFNGEECALPRAIPLPSSACHCPYSVMRLVFILAVTLALITDRFH 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4844817 4847541 + CmaCh04G009420.1 Cma04g00942 292023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00942 700 MobiDBLite consensus disorder prediction 53 74 - -
Cma04g00942 700 Pfam COBRA-like protein 271 450 IPR006918 GO:0010215|GO:0031225
Cma04g00942 700 PANTHER COBRA-LIKE PROTEIN 10 25 699 - -
Cma04g00942 700 PANTHER COBRA-LIKE PROTEIN 7 25 699 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00942 Cma16g00850 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00942 Cma-Chr4:4844817 Cma06g01550 Cma-Chr6:9706162 0 dispersed
Cma16g00850 Cma-Chr16:5020925 Cma04g00942 Cma-Chr4:4844817 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00942 - - cmax:111492051 1405.19