Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g00969 | ATGAGGACTGGGAACCGAAAGAGGAAGCTAAGGCTAAGCAAGATCTATTCATTTGCTTGTGGAAGAACTTCATTGAAAGATGAAGATCATTCACAAATTGGAATGCTCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAACTCTATCAGTTCTACAAAGTACACACCTATCACTTTTGTGCCCAAGTCGCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTAATTGCTGGTTTAGTAGCCTTCACTCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTGTCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAAGAAGGTGTTGAAGATTGGAGACGAAAAGCACAGGATATTGAGGTGAATAATAGAATGGTTAAAGTTCATCAAGGCAATGGAGTCTTTGATAATACTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAATGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTCGATACAACTGCATTTGCACGTGAGGATTCTAACTTTTTTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGTATGGACTTTGAAGATCAAAAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGCCATGATTCAAAGGTTATTCAAAATTCTACTGATCCACCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATTATATATCTGTTGTTTAGCTGTCTATTCATGCTGGCCTTCATTGGATCTATAATCTTCGGAGTTATGACTAAAGATGATCTTAAAAATGGGAGGACAAAGAGATGGTACCTTAGGCCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTCCACTTTCTGTCAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATAGAAGTTGTCAAAGTTCTTCAGAGTATCTTTATCAATCAAGACATTCACATGTATTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACCGGAACTTTGACCTGTAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGAAGCGGAGTCACTGAAACTGAGAGAGCTATGGAAGGCAGAAACGGCATGCCAATGCTTTACGGAAATGGCAATGGAAACACCTATAAGCACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAATAGGATTATGAACGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCCACTTGTCAAACAGCTATTCCAGATGTTGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTCGAATTCTTCCAGAGGACACAGACAAGTATATCGATTCGTGAACTCGATCCTAGGTCTGGAAGGAAGGTTGAAAGGTCATATAAGCTTTTAAATGTTCTGGAGTTTAATAGCGCCAGGAAGAGGATGTCTGTTATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTAAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTACGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAATTATTTGATAGGCAATTCAATGAAGCTAAGAATTCAGTTAGTGCAGAGAGGGATTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGAGTCCCTGAATGCATAGACAAACTTGCCCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGGTCAATATTGGTTTTGCCTGCAGTTTGCTTAGACAAGGAATGAAACAGATTATTATATCTCTGGAAACACCAGAAATTCAGGCCTTAGAAAGGACAGGAGAGAAGGATATGATCAGTAAGGCATCAAAAGAAAGTGTCATCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCGCAGAGGCTTATGCATTGATAATAGATGGGAAGTCACTTACTTATGCTCTAGAGGATGATGTGAAGGATGCATTCCTTGAGCTCGCAATTGGGTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAAGCAATGGTCACTCGATTGGTTAAACTTGCAACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAGGAAGCAGATATTGGCATTGGAATTAGTGGTGCCGAAGGAATGCAGGCTGTCATGTCGAGTGATATTGCAATTGCTCAGTTCAGATATTTGGAGCGTCTACTACTTGTACATGGACATTGGTGCTACAGGAAATTGTCATCAATGATATGCTACTTTTTCTACAAGAATTTTACCTTTGGTTTTACGCTTTTCTTATACGAGGCATACACTTCATTCTCTGCACAACCTGCATATAACGATTGGTTTATGTCACTCTACAATGTTGTGTTCTCCGCACTGCCAGTTGTGGCTCTTGGGGTGTTTGACCAGGACGTGTCTGCAAGATATTGCCTTAAGTTTCCTATGTTGTACCAGCAAGGTGTTCAGAATGTCCTCTTCAGCTGGGCCCGGATACTCAGCTGGATGTTTAATGGTTTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAATGGAATGAAGCATCAGGCATTTAACCCCGATGGGAAAACTGTGGGGAGAGATATCCTTGGAACGACAATGCTGTCATGTGTTGTTTGGGTCGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACCTTGTTACAACATATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTCTTTTTGATGATATATGGAGCCTTCCCTGCCAACATTTCAGGAAATGCATATCGTGTGTTCCTCGAAGCCCTTGCTCCTGCCGGGTCTTATTGGGTTCTGCTGATCTTTGTGGTGCTCTCTACTCTCATTCCATTCTTTGTGTACTCAGCATTACAGGTGAATTTCTTTCCGATGTACCATGAAAAAATACAGTGGATCAGGCACAATGGTAAGGGTCAGATAGACAATCCTGAGTTTGTCAATATGGTCAGGCAAAGCTCGTTGAAACCAGCAACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGATAATTCATAG | 3591 | 41.19 | MRTGNRKRKLRLSKIYSFACGRTSLKDEDHSQIGMLGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFVPKSLFEQFRRVANFYFLIAGLVAFTPLAPYTAVSAIVPLIAVIIATMVKEGVEDWRRKAQDIEVNNRMVKVHQGNGVFDNTEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVEMMNLDGETNLKVKQALDTTAFAREDSNFFDFKATIKCEDPNANLYTFVGSMDFEDQKYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSCLFMLAFIGSIIFGVMTKDDLKNGRTKRWYLRPDDSTIYFDPKNAPAAAIFHFLSALMLYNYFIPISLYVSIEVVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPMLYGNGNGNTYKHNEDATDTTPSVKGFNFKDNRIMNGNWVNEPHADVIQKFFRLLATCQTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFFQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASKFEEKTKDHINEYADAGLRTLVLAYRELDEEEYKLFDRQFNEAKNSVSAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAVNIGFACSLLRQGMKQIIISLETPEIQALERTGEKDMISKASKESVIHKITRARSQLTASSGSAEAYALIIDGKSLTYALEDDVKDAFLELAIGCASVICCRSSPKQKAMVTRLVKLATGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRKLSSMICYFFYKNFTFGFTLFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWARILSWMFNGLCSALIIFFFCTNGMKHQAFNPDGKTVGRDILGTTMLSCVVWVVNLQMALSVSYFTLLQHIFIWASIFIWYLFLMIYGAFPANISGNAYRVFLEALAPAGSYWVLLIFVVLSTLIPFFVYSALQVNFFPMYHEKIQWIRHNGKGQIDNPEFVNMVRQSSLKPATVGFTARLAAKIRRDNS | 1196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4960347 | 4967577 | - | CmaCh04G009690.1 | Cma04g00969 | 292050 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g00969 | 1196 | Pfam | Phospholipid-translocating ATPase N-terminal | 42 | 108 | IPR032631 | - | |
Cma04g00969 | 1196 | SUPERFAMILY | HAD-like | 421 | 921 | IPR036412 | - | |
Cma04g00969 | 1196 | CDD | P-type_ATPase_APLT_Dnf-like | 59 | 1027 | - | - | |
Cma04g00969 | 1196 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 833 | 951 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma04g00969 | 1196 | SUPERFAMILY | Calcium ATPase, transduction domain A | 141 | 285 | IPR008250 | - | |
Cma04g00969 | 1196 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 433 | 671 | IPR023299 | GO:0000166 | |
Cma04g00969 | 1196 | PRINTS | P-type cation-transporting ATPase superfamily signature | 426 | 440 | - | - | |
Cma04g00969 | 1196 | PRINTS | P-type cation-transporting ATPase superfamily signature | 867 | 886 | - | - | |
Cma04g00969 | 1196 | SFLD | p-type atpase | 408 | 918 | IPR044492 | - | |
Cma04g00969 | 1196 | Gene3D | - | 699 | 907 | IPR023214 | - | |
Cma04g00969 | 1196 | Pfam | E1-E2 ATPase | 139 | 384 | - | - | |
Cma04g00969 | 1196 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 895 | 1145 | IPR032630 | - | |
Cma04g00969 | 1196 | Pfam | Cation transport ATPase (P-type) | 536 | 629 | - | - | |
Cma04g00969 | 1196 | Gene3D | - | 549 | 687 | IPR023299 | GO:0000166 | |
Cma04g00969 | 1196 | SFLD | C1.7: P-type atpase like | 408 | 918 | - | - | |
Cma04g00969 | 1196 | Gene3D | - | 113 | 288 | - | - | |
Cma04g00969 | 1196 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 56 | 1144 | IPR023298 | - | |
Cma04g00969 | 1196 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 57 | 1152 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cma04g00969 | 1196 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 5 | 1193 | - | - | |
Cma04g00969 | 1196 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 428 | 434 | IPR018303 | - | |
Cma04g00969 | 1196 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 5 | 1193 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00969 | Cma-Chr4:4960347 | Cma18g01061 | Cma-Chr18:8794419 | 0 | dispersed | |
Cma15g01422 | Cma-Chr15:8999195 | Cma04g00969 | Cma-Chr4:4960347 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g00969 | K01530 | - | csv:101205800 | 2231.45 |