Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g00994 ATGTTGATATCGATATCTTCTCGTGTTCTTGTCTGTGTTCTTTTGTTCGTCGTAGGCTGCGTCGATGCTGTAGAAATCGATGAGGAAAAGAAACATTTCATTGTTTTCCTGGAAATGAAGCCTGGTTTGAATGAGTTTGATGCAGTGGAAACACATCTTAATGTTCTCATGTCAGTGAAGGAAAGCTATGTCGAGGCGGAGGAGTCGATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCAGCCAAGCTTACTGAAGAGGAAGCCCTAGCATTGTCAAAGAGGGAAGATGTGCATCACGTGATTCCAAACCGCTATAGAAAATTACAAACAACACGATCATGGGATTTCATCGGATTGTCTTCTCATGCCAAGAGAAATTCCAAAGAGACAGATATTATTGTGGGTTTATTTGATACCGGGATCACTCCAACCGCTGATAGCTTTAAAGATGATGGGTTTGGTCCTCCTCCCACAAAATGGAAGGGCACGTGTCACCATTTCGCCAATTTCACCGGCTGCAACAAAAAACTCATCGGAGCAAGATATTTCAAGCTCGACGGCAACACCGATCCGGCCGACATCTTGTCGCCGATAGACGTCGATGGCCACGGCACGCATACGTCCTCAACGGCAACAGGTAATGCAGTTGCCGGAGCCAGCCTCTCTGGTCTGGCCAAAGGAACTGCCCGTGGAGGCGTGCCGTCAGCCAGAGTTGCCATGTACAAGGTCTGCTGGGCTAGCACTGGGTGCGCCGATATGGATATTCTAGCCGCCTTTGACGCTGCCATACATGATGGCGTCGATGTCATTTCAATATCAATCGGCGGCGGCGCCTTTGGCAATTACTCCGATGATTCCATCTCCATTGGGGCGTTTCATGCCATGAAGAAGGGTATCATCACCGTGACCTCCGCTGGAAACGACGGCCCGACCCCCGGCAGTGTCGTTAACCACGCGCCGTGGATTGTGACGGTTGGGGCCAGTGCGATTGATCGGAAATTTATCAGTCTACTAGAGTTGGGCAATGGGAAGAACATCTCGGGAGTAGGGATAAACATATTCAATCCAAAGAAAAAAATGTACCCATTAGTGTACGGAGGGGATGTGGCGAGGGGCGCAGGGAACAGAGAGAGCGCAAGCCATTGCGAGGAGGACTCGCTTGATCCAAGCAAGGTGAAGGGCAGTCTTGTTTTCTGCGAATTGATCACTTGGGGCGTTGATTCTGTTGTCAGTGCGCTTGGTGCCAACGGCGCTATCATTCAAAGCAATGAGTATCTTGACAATGCTAATATCTTCATGGCTCCTGCCACCATGGTTAGCAGCTCTGTTGGTGCTGTTATTCACTCCTATATCAAGTCCACCAGAACCCCCACGGCAGTAATATACAAAACCAGGCAGCTCAAAGCAGCAGCTCCTATGGCCGCTTCCTTCTCTTCTAGAGGCCCAAATCCAGGCACTACTCGCATTCTTAAGCCGGACATAGCAGCGCCCGGAGTGGACATATTGGCCGGTTACACGCCGCTGAAGTCACTAACAGGGCAGGAGGGTGACACCCAATTCTCCAAATTTACACTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCAGCCGCCGCCGCCTATGTCAAGTCTTTCCATCCTCTTTGGTCTCCTGGCGCCATTAGATCCGCCCTGATCACCACCGCGAGTCAGATCAGCCGACGGCTGAATCCTGATGGCGAATTTGCATATGGCGCTGGCAATCTAAATCCATCAAGAGCCATAAATCCTGGCCTAATCTATGATCTCAATGAAATGTCATACATCCAATTCCTTTGTAGTGAAGGCTACACCGGATTTTCGATCAGCGTCCTCACTGGAACTAAATCCATAAACTGCTCTACTTTAATCCCGGGGCATGGACATGACTCTCTCAATTATCCAACCTTTCAACTCAGGCTCAAGAGCCCTCGACGAGCGATGTCCACCGTGTTCCGACGACGAGTCACCAACGTCAGTCACCCCGTATCTGTCTACAATGCCACCATCAAGGCTCCCCCGGGGGTGGAGATCACGGTTACACCAAGCACATTGTCATTTTCACGGCTGCAGCAGAAGCGGAGCTTTAAGGTGGCTGTGAAGGCCAGTCCTTTGGCGTCGGGGAAAATGGTGTCAGGTTCGGTTGCTTGGATCGGAGCTCGACATGCTGTGAGAAGTCCAATTGTTGTTTATAGCCCTGAGGATGAAGAAGTATTTGTAAGGGAATGA 2256 50.22 MLISISSRVLVCVLLFVVGCVDAVEIDEEKKHFIVFLEMKPGLNEFDAVETHLNVLMSVKESYVEAEESMVYSYTKSFNAFAAKLTEEEALALSKREDVHHVIPNRYRKLQTTRSWDFIGLSSHAKRNSKETDIIVGLFDTGITPTADSFKDDGFGPPPTKWKGTCHHFANFTGCNKKLIGARYFKLDGNTDPADILSPIDVDGHGTHTSSTATGNAVAGASLSGLAKGTARGGVPSARVAMYKVCWASTGCADMDILAAFDAAIHDGVDVISISIGGGAFGNYSDDSISIGAFHAMKKGIITVTSAGNDGPTPGSVVNHAPWIVTVGASAIDRKFISLLELGNGKNISGVGINIFNPKKKMYPLVYGGDVARGAGNRESASHCEEDSLDPSKVKGSLVFCELITWGVDSVVSALGANGAIIQSNEYLDNANIFMAPATMVSSSVGAVIHSYIKSTRTPTAVIYKTRQLKAAAPMAASFSSRGPNPGTTRILKPDIAAPGVDILAGYTPLKSLTGQEGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPGAIRSALITTASQISRRLNPDGEFAYGAGNLNPSRAINPGLIYDLNEMSYIQFLCSEGYTGFSISVLTGTKSINCSTLIPGHGHDSLNYPTFQLRLKSPRRAMSTVFRRRVTNVSHPVSVYNATIKAPPGVEITVTPSTLSFSRLQQKRSFKVAVKASPLASGKMVSGSVAWIGARHAVRSPIVVYSPEDEEVFVRE 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5129626 5134496 + CmaCh04G009940.1 Cma04g00994 292075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g00994 751 CDD Peptidases_S8_3 109 566 IPR034197 -
Cma04g00994 751 Pfam Subtilase family 133 583 IPR000209 GO:0006508|GO:0008236
Cma04g00994 751 SUPERFAMILY Subtilisin-like 13 619 IPR036852 GO:0004252|GO:0006508
Cma04g00994 751 Gene3D - 333 469 - -
Cma04g00994 751 Pfam Fibronectin type-III domain 641 739 IPR041469 -
Cma04g00994 751 CDD PA_subtilisin_like 340 463 - -
Cma04g00994 751 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Cma04g00994 751 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Cma04g00994 751 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cma04g00994 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 741 IPR045051 -
Cma04g00994 751 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 33 741 - -
Cma04g00994 751 Gene3D - 608 741 - -
Cma04g00994 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cma04g00994 751 ProSiteProfiles Serine proteases, subtilase domain profile. 115 591 - -
Cma04g00994 751 Gene3D Peptidase S8/S53 domain 133 604 IPR036852 GO:0004252|GO:0006508
Cma04g00994 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Cma04g00994 751 Pfam Peptidase inhibitor I9 48 110 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00994 Cma-Chr4:5129626 Cma04g01156 Cma-Chr4:5907534 0 dispersed
Cma06g00461 Cma-Chr6:2167919 Cma04g00994 Cma-Chr4:5129626 3.82E-32 dispersed
Cma06g00462 Cma-Chr6:2168960 Cma04g00994 Cma-Chr4:5129626 5.09E-110 dispersed
Cma04g00045 Cma-Chr4:229069 Cma04g00994 Cma-Chr4:5129626 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g00994 - - csv:101206801 1198.73