Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01052 | ATGGAGGCCACCATGACTGACTCAAGTTTACGAGCCAAACAGTCCTTCAAAAACTTCACCGTTGACAACTGCAAGACCATGTATTTTGTCGGCCATGACACCACCGCCGTCACCACCGCTTGGTCCTTGATGCTCCTCGCCCTCCATCCCGATTGGCAAGACCGTATCAGCTCCAAGTTTTCTCACACTTGCCCTAACGGTCGCTTCGACATGACGGCGATTTCTCAACTCAAATCGGTGAGTTTGGTGGTTCAAGAAACATTGCAGTTGTACCCGCCGGGCGCATTTGTAGCGAGGGAGACATTTGATGAGGTACAACTTGGGAACGTGGTTATTCCAAAGGGTGTCTGCATATGGACTTTGATACCGACGCTACGCAAAGAAATTGAAATATGGGGAGAAGATGCGAATGAGTTCAAGCCAGAACGGTTTGCAGACGGTATAGCCCAGGCCTGCAAGGTTCCACAACTCCACATGTCATTTGGAGTACGTCAACGATTGTGCTTGGGGAAGAACTTTGCATTGGTTGAGTTGAAAATCATAATTTCTCTTATAGTTTCGAAGTTTAGACTCTCGCTGTCTTTTGAGTATCGTCATTCCCCTTCTTTTAGAATGGTTGTGGGGCCTTCAAACCGTGTGAAGATTGTGGTCAAAGGGTTTAAATTAGAGTGTAAGAAGTTGAGTTACTAA | 690 | 46.67 | MEATMTDSSLRAKQSFKNFTVDNCKTMYFVGHDTTAVTTAWSLMLLALHPDWQDRISSKFSHTCPNGRFDMTAISQLKSVSLVVQETLQLYPPGAFVARETFDEVQLGNVVIPKGVCIWTLIPTLRKEIEIWGEDANEFKPERFADGIAQACKVPQLHMSFGVRQRLCLGKNFALVELKIIISLIVSKFRLSLSFEYRHSPSFRMVVGPSNRVKIVVKGFKLECKKLSY | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5439112 | 5439867 | + | CmaCh04G010520.1 | Cma04g01052 | 292133 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01052 | 229 | Gene3D | Cytochrome P450 | 3 | 220 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | P450 superfamily signature | 159 | 168 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | P450 superfamily signature | 168 | 179 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | P450 superfamily signature | 82 | 93 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | P450 superfamily signature | 30 | 47 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 3 | 211 | - | - | |
Cma04g01052 | 229 | Pfam | Cytochrome P450 | 22 | 200 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | E-class P450 group IV signature | 168 | 186 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | E-class P450 group IV signature | 77 | 93 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | E-class P450 group IV signature | 152 | 168 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PRINTS | E-class P450 group IV signature | 21 | 47 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01052 | 229 | PANTHER | CYTOCHROME P450 714A1-RELATED | 3 | 211 | - | - | |
Cma04g01052 | 229 | SUPERFAMILY | Cytochrome P450 | 20 | 218 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01052 | Cma-Chr4:5439112 | Cma17g00077 | Cma-Chr17:381497 | 2.08E-64 | dispersed | |
Cma04g01048 | Cma-Chr4:5434158 | Cma04g01052 | Cma-Chr4:5439112 | 6.23E-130 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01052 | K20661 | - | cmax:111484107 | 363.614 |