Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01092 ATGGAAGCTGAAGATCTTCCAGAAGCAAAGGCAGCCCTCAGCCTCCTCCGTAGTAGACTCTGCAACACTAGTTTCTACTTCAAGCCTCCATCCGATTCTTCTGATAGTAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGCAATAATTCGATCCTGCTTCTCGGCCCTCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTGCAAGATCTATTACTAGAATATCCCGATATGATTACCGTGATAAGGTTGAGTGGCCTTTTGCATTGTGACGACAATGGTGCTTTCAAGGAGATTGCTAGGCAGCTTTGCTCGGAGTACCAATTGTTGTTCTCAAAAATGGCATCCTTCGATGATAACTCCCAGTTTATGATAGCTATGCTACGGGAGTGTGGCTTGGCTCACAAGACAATTGTTTTTGTACTGGATGAATTTGATCTTTTTGCACAAGGGAAACAAAGGTTACTTTATAGTTTGCTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGGATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAGAGAGTAAGATCTCGTTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTGGAGAGATTGCTGGAGCACATTTTAACATTGCCAATTGACTCGGACCTTCCTCACGACTACACTATTAAATTTAATGCAAAGCTTCATAATATGTTAGCAGATGAGAGATTCAAAAAGATCATTAACACATATTTGGACTCTGATTCAACTGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGAACTTGAAATCTGGCATGCTGACTCTTGAGAATTTTGAACATGCTCTTTCAAATATTCAGAGGCAGCCAAAGCAGGAATGTATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTGAAGGAACAGAATTCGTACAACTTCAATTCTGTAATGAAAGAGTACAAAAGCATACACGATTCATTCCAGACGTCTGATTATTATTCGCGAAGCGTGTGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAGTTAATCTGCTTCACTGACAACCGTGGACATAATCAATCAATTGAATTTCGACCAGTCAAGCTGTTAATATCGTCGCCTGAACTTCATCTTGGACTGAAGGCGTATCGTTCTTGTCCTGTCATTCTTCAGAAACTAATGAATTGA 1257 41.05 MEAEDLPEAKAALSLLRSRLCNTSFYFKPPSDSSDSNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIRLSGLLHCDDNGAFKEIARQLCSEYQLLFSKMASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILTLPIDSDLPHDYTIKFNAKLHNMLADERFKKIINTYLDSDSTVKQLVRYLFCAISKMNLKSGMLTLENFEHALSNIQRQPKQECIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFQTSDYYSRSVCLRAFEHLLQRELICFTDNRGHNQSIEFRPVKLLISSPELHLGLKAYRSCPVILQKLMN 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5617593 5622306 - CmaCh04G010920.1 Cma04g01092 292173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01092 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 300 IPR027417 -
Cma04g01092 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 400 IPR032705 -
Cma04g01092 418 Gene3D - 34 209 IPR027417 -
Cma04g01092 418 Pfam AAA ATPase domain 39 174 IPR041664 -
Cma04g01092 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cma04g01092 418 PIRSF ORC4 3 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01092 K02606 - csv:101220845 770.385