Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01122 | ATGGCCTTTTTCTTTTTTCTCCTCTTCTTTTCCTCTGTTTTCGCCTCTTCTCTGTTTCTCTTTCTCTTTCTCCGGCCGGCGAGATTCCGGCGTGCCAGGCTGCCACCGGGGACACTCGGCCTCCCCTTCATCGGAGAGTCTCTTCAACTCATCTCCGCTTACAAGACCGAGAACCCCGAACCCTTCATCGACGAGCGTGTGCGACGATTCGGACCGGTTTTTACAACCCACGTGTTCGGAGAGCCGACGGTTTTCTCGGCGGATTGGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTCGAGTGCAGCTACCCGGGTTCGATTTCGAACCTGCTTGGGAAGCACTCTTTGTTGGTGATGAAAGGGAGTTTGCATAAGAGAATGCATTCTTTGACTATGAGCTTCGGGAATTCTTCCATTATTAGGGATCATCTTTTGGTCGACGTAGACCGGTTGATTCGGCTCAATTTGGAGTCTTGGACCGGCCGGATCTTCCTCATGGAGGAGGCTAAGAAGATAACGTTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGGTGTGAATGGACTCAAAATCTGATGAAAGAATACCTTCTTGTCATCGAAGGCTTTTTTACCGTCCCTTTCCCTCTCTTCTCGTCTACTTACCGTCGAGCCATCCAGGCACGTGAGAAAGTGGCGGAGCAATTGCGGACGGTGGTGCGGCAGCGGAGGAAACAGAGCAAGGAGGGAGAGAGGAAGAAGGACATGCTTGGAGCGCTCCTCGCCGGAGAAGACGCCCTCTCCGACGACCAAATAGTAGATTTCTTATTGGCTCTACTGGTCGCCGGATATGAAACCACGTCAACCACCATGACCCTCGCCGTCAAGTTTCTCACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACGACCAAATCAAAGCAAGGAACAAGGAATCGCACCAACGCCTTCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTCAATGAAACATTAAGAGTTGCCAACATCATCAGTGGCGTGTTTAGGAGGGCAATCACCGACGTAAATATCAAAGGGTATACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCTCTTTTAACCCATGGAGATGGCAAAAGACTAGCTCCGGCTCCACCACGCTTAATGCTTTTACACCCTTCGGAGGAGGTCCCAGACTATGCCCTGGTTATGAGCTTGCCAGAGTTGAGCTCTCTGTTTTCCTTCATCATCTCGTCACTCAATTCAGTTGGGTTCCAGCAGAAGATGATAAGTTGGTGTTTTTTCCAACAACAAGAACACAGAAGCGCTATCCAATCTATGTGACGCGGAAGAATGACACTACACACTCATCCACCCCACACATCAAGGGAGGCGAGGCGAATCGAGTCGAGTCAGGTTTCAATATGTAG | 1491 | 49.43 | MAFFFFLLFFSSVFASSLFLFLFLRPARFRRARLPPGTLGLPFIGESLQLISAYKTENPEPFIDERVRRFGPVFTTHVFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLVMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPFPLFSSTYRRAIQAREKVAEQLRTVVRQRRKQSKEGERKKDMLGALLAGEDALSDDQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHDQIKARNKESHQRLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAITDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQKTSSGSTTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNDTTHSSTPHIKGGEANRVESGFNM | 496 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5801740 | 5806285 | - | CmaCh04G011220.1 | Cma04g01122 | 292203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01122 | 496 | PANTHER | CYTOCHROME P450 90A1 | 12 | 470 | - | - | |
Cma04g01122 | 496 | Pfam | Cytochrome P450 | 209 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PANTHER | CYTOCHROME P450 26 | 12 | 470 | - | - | |
Cma04g01122 | 496 | Gene3D | Cytochrome P450 | 25 | 471 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | Coils | Coil | 303 | 323 | - | - | |
Cma04g01122 | 496 | PRINTS | P450 superfamily signature | 280 | 297 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | P450 superfamily signature | 337 | 348 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 269 | 286 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 289 | 315 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 336 | 354 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 376 | 400 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | PRINTS | E-class P450 group I signature | 421 | 444 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01122 | 496 | MobiDBLite | consensus disorder prediction | 475 | 496 | - | - | |
Cma04g01122 | 496 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506|GO:0016705 | |
Cma04g01122 | 496 | SUPERFAMILY | Cytochrome P450 | 28 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01122 | Cma04g00159 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01122 | Cma-Chr4:5801740 | Cma14g01267 | Cma-Chr14:10046353 | 1.89E-131 | dispersed | |
Cma07g00460 | Cma-Chr7:2004308 | Cma04g01122 | Cma-Chr4:5801740 | 5.81E-73 | dispersed | |
Cma10g00342 | Cma-Chr10:1593680 | Cma04g01122 | Cma-Chr4:5801740 | 5.80E-11 | dispersed | |
Cma17g00733 | Cma-Chr17:5975855 | Cma04g01122 | Cma-Chr4:5801740 | 6.86E-80 | dispersed | |
Cma19g00605 | Cma-Chr19:6623302 | Cma04g01122 | Cma-Chr4:5801740 | 1.07E-80 | dispersed | |
Cma04g00780 | Cma-Chr4:3975123 | Cma04g01122 | Cma-Chr4:5801740 | 3.77E-120 | transposed | |
Cma04g02669 | Cma-Chr4:18119812 | Cma04g01122 | Cma-Chr4:5801740 | 1.24E-93 | transposed | |
Cma08g01310 | Cma-Chr8:7913743 | Cma04g01122 | Cma-Chr4:5801740 | 7.79E-93 | transposed | |
Cma04g00159 | Cma-Chr4:787794 | Cma04g01122 | Cma-Chr4:5801740 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01122 | K09588 | - | csv:101216594 | 842.802 |