Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01156 ATGATCTCAGTGATGCATCAAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAACGGCTTTGCAGCCTGGCTCAACGAGGAGGAGGCTCGAAAATTCGCCAGTGGAGATGGATGAAGTTGTTTCCGTGTTTCCCAGTGAAAAGAAACAGCTTCATACAACAAGATCATGGGATTTTATGGGTTTCTTCCAACAAGCTCGAAGATCGAGCTTGGAGAGCGATTTGGTCATCGGAATGTTGGACACTGGGATTTGGCCGGAATCTGAAAGCTTTTCCGATGAAGGGCTTGGTCCACCACCGCCAAAATGGAAAGGCGGATGCCAACCCGCTTCTAACTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCGGTGAAGGCGATATTCTTTCTCCGAGGGACACAGAAGGCCATGGAACCCACACCGCATCCACTGCCGGAGGCAATTTGGTCTCCGGCGCCAGCCTCTTCGGCCTTGGTCTCGGCACCGCCCGGGGTGGCACTCCCTCCGCCCGCATAGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGACGCCGATATCCTCGCGGCTTTCGACAATGCAATCGCCGATGGCGTGGATATCATCTCTCTTTCCGTCGGAGGCTTTATTGCCAAGGATTACTTCAACGATTCAATTGCAATTGGGGCTTTTCACGCGATGAAGAATGGGATTCTGACTTCAAATTCCGGTGGGAACTCTGGCCCTAGCCTTGGCAGCATCACGAATGTTTCTCCATGGTCGCTATCGGTGGCTGCTAGTACCATCGATAGGAAGTTTGTGACGAATGTGAAATTGGGTAATGGAGAATCTTCTCAGGGGATCTCTGTCAACACCTTCCAACTTGGAGATAAGTTGATTCCACTTATATATGCTGGTGATGCTCCTAATACAACTGCCGGTTTCAATGAATCATTATCAAGGTTCTGCTTCCCAGGGTCTTTGGACGTGAACCAAGTTGAGGGAAAGATTGTTCTTTGCGATGAGATTGGCGATGGGGAAGCAGCTCTGAGTAGTGGTGCGGTTGGTACAATAATGCAAGATGGTGGTCTCCAAGATGCCGCCTTTCTTTTTCCCCTGCCCGCTTCCGTGTTAGACTTGAACGCTGGAAACAATGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGAAGCCACCATAGAAAAAAGCACCACAATTGAGGATCTGTCAGCCCCATCTGTTGTTTCCTTCTCATCAAGGGGTCCTAACCTAATTACACTAGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATAGTAGCATCTTGGTCTGAAGGTACAACAATTGGAGGTTTAGAAGGGGATAACCGAGTATCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCGACAGGAGCCGCTGCCTATGTCAAATCATTTCACCCAACTTGGTCTCCAGCTGCTATTAAGTCTGCACTTATGACAACAGCTTTTCCCATGGCTCCAAAGTTAAACACGGATGCTGAGTTTGCATATGGAGCAGGTCACATAAACCCAGCGAATGCCATAAACCCCGGTTTAGTGTATGATGCAGAAGAGATTGATTACATAAAATTCTTATGTGGGCAAGGATATAGTACTCAAAATCTTCGTCTTGTTACCGGAGACGAAAGCAACTGTTCAGATGTTGCAAAAACAGCTGCATCAGATCTAAATTATCCGTCTTTTAGCCTATTAATGAAGTCCCAAAAATTGAATACTCGTGTCTACCACAGGACTGTCACAAACGTGGGGGTGCCAGTGTCGACATATAAAGCAGTTATTCGAGCTCCGCCTGGGCTGGAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAGAAGATGTCGTTCACTGTGAGGGTTAGAGCAAACAGTGGTGGGAATATTCTTTCTGGTAGCTTAAGCTGGGAGGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTGCATTTGGTATTCCATCATGA 2037 48.06 MISVMHQNLWCIATTGASTALQPGSTRRRLENSPVEMDEVVSVFPSEKKQLHTTRSWDFMGFFQQARRSSLESDLVIGMLDTGIWPESESFSDEGLGPPPPKWKGGCQPASNFTCNNKIIGARFFRSEPLGEGDILSPRDTEGHGTHTASTAGGNLVSGASLFGLGLGTARGGTPSARIAVYKICWSDGCFDADILAAFDNAIADGVDIISLSVGGFIAKDYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESSQGISVNTFQLGDKLIPLIYAGDAPNTTAGFNESLSRFCFPGSLDVNQVEGKIVLCDEIGDGEAALSSGAVGTIMQDGGLQDAAFLFPLPASVLDLNAGNNVFQYLRSTSNPEATIEKSTTIEDLSAPSVVSFSSRGPNLITLDILKPDLAAPGVDIVASWSEGTTIGGLEGDNRVSPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMAPKLNTDAEFAYGAGHINPANAINPGLVYDAEEIDYIKFLCGQGYSTQNLRLVTGDESNCSDVAKTAASDLNYPSFSLLMKSQKLNTRVYHRTVTNVGVPVSTYKAVIRAPPGLEVTVRPATLSFRSLGQKMSFTVRVRANSGGNILSGSLSWEDGVHLVRSPIVAFGIPS 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5907534 5910478 - CmaCh04G011560.1 Cma04g01156 292237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01156 678 Pfam Fibronectin type-III domain 577 672 IPR041469 -
Cma04g01156 678 ProSiteProfiles Serine proteases, subtilase domain profile. 56 530 - -
Cma04g01156 678 PANTHER PUTATIVE-RELATED 37 675 - -
Cma04g01156 678 Pfam Subtilase family 73 522 IPR000209 GO:0006508|GO:0008236
Cma04g01156 678 SUPERFAMILY Subtilisin-like 56 531 IPR036852 GO:0004252|GO:0006508
Cma04g01156 678 Gene3D - 547 674 - -
Cma04g01156 678 Gene3D Peptidase S8/S53 domain 74 543 IPR036852 GO:0004252|GO:0006508
Cma04g01156 678 Gene3D - 271 408 - -
Cma04g01156 678 CDD Peptidases_S8_3 49 504 IPR034197 -
Cma04g01156 678 ProSitePatterns Serine proteases, subtilase family, serine active site. 469 479 IPR023828 -
Cma04g01156 678 PRINTS Subtilisin serine protease family (S8) signature 72 91 IPR015500 -
Cma04g01156 678 PRINTS Subtilisin serine protease family (S8) signature 140 153 IPR015500 -
Cma04g01156 678 PRINTS Subtilisin serine protease family (S8) signature 468 484 IPR015500 -
Cma04g01156 678 CDD PA_subtilisin_like 277 401 - -
Cma04g01156 678 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 675 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01156 Cma04g00184 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00994 Cma-Chr4:5129626 Cma04g01156 Cma-Chr4:5907534 0 dispersed
Cma04g01156 Cma-Chr4:5907534 Cma15g01114 Cma-Chr15:7075498 0 dispersed
Cma07g00861 Cma-Chr7:4014311 Cma04g01156 Cma-Chr4:5907534 0 dispersed
Cma04g01156 Cma-Chr4:5907534 Cma04g01157 Cma-Chr4:5916508 0 tandem
Cma04g00183 Cma-Chr4:886209 Cma04g01156 Cma-Chr4:5907534 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01156 - - cmos:111458206 1228.77