Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01156 | ATGATCTCAGTGATGCATCAAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAACGGCTTTGCAGCCTGGCTCAACGAGGAGGAGGCTCGAAAATTCGCCAGTGGAGATGGATGAAGTTGTTTCCGTGTTTCCCAGTGAAAAGAAACAGCTTCATACAACAAGATCATGGGATTTTATGGGTTTCTTCCAACAAGCTCGAAGATCGAGCTTGGAGAGCGATTTGGTCATCGGAATGTTGGACACTGGGATTTGGCCGGAATCTGAAAGCTTTTCCGATGAAGGGCTTGGTCCACCACCGCCAAAATGGAAAGGCGGATGCCAACCCGCTTCTAACTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCGGTGAAGGCGATATTCTTTCTCCGAGGGACACAGAAGGCCATGGAACCCACACCGCATCCACTGCCGGAGGCAATTTGGTCTCCGGCGCCAGCCTCTTCGGCCTTGGTCTCGGCACCGCCCGGGGTGGCACTCCCTCCGCCCGCATAGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGACGCCGATATCCTCGCGGCTTTCGACAATGCAATCGCCGATGGCGTGGATATCATCTCTCTTTCCGTCGGAGGCTTTATTGCCAAGGATTACTTCAACGATTCAATTGCAATTGGGGCTTTTCACGCGATGAAGAATGGGATTCTGACTTCAAATTCCGGTGGGAACTCTGGCCCTAGCCTTGGCAGCATCACGAATGTTTCTCCATGGTCGCTATCGGTGGCTGCTAGTACCATCGATAGGAAGTTTGTGACGAATGTGAAATTGGGTAATGGAGAATCTTCTCAGGGGATCTCTGTCAACACCTTCCAACTTGGAGATAAGTTGATTCCACTTATATATGCTGGTGATGCTCCTAATACAACTGCCGGTTTCAATGAATCATTATCAAGGTTCTGCTTCCCAGGGTCTTTGGACGTGAACCAAGTTGAGGGAAAGATTGTTCTTTGCGATGAGATTGGCGATGGGGAAGCAGCTCTGAGTAGTGGTGCGGTTGGTACAATAATGCAAGATGGTGGTCTCCAAGATGCCGCCTTTCTTTTTCCCCTGCCCGCTTCCGTGTTAGACTTGAACGCTGGAAACAATGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGAAGCCACCATAGAAAAAAGCACCACAATTGAGGATCTGTCAGCCCCATCTGTTGTTTCCTTCTCATCAAGGGGTCCTAACCTAATTACACTAGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATAGTAGCATCTTGGTCTGAAGGTACAACAATTGGAGGTTTAGAAGGGGATAACCGAGTATCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCGACAGGAGCCGCTGCCTATGTCAAATCATTTCACCCAACTTGGTCTCCAGCTGCTATTAAGTCTGCACTTATGACAACAGCTTTTCCCATGGCTCCAAAGTTAAACACGGATGCTGAGTTTGCATATGGAGCAGGTCACATAAACCCAGCGAATGCCATAAACCCCGGTTTAGTGTATGATGCAGAAGAGATTGATTACATAAAATTCTTATGTGGGCAAGGATATAGTACTCAAAATCTTCGTCTTGTTACCGGAGACGAAAGCAACTGTTCAGATGTTGCAAAAACAGCTGCATCAGATCTAAATTATCCGTCTTTTAGCCTATTAATGAAGTCCCAAAAATTGAATACTCGTGTCTACCACAGGACTGTCACAAACGTGGGGGTGCCAGTGTCGACATATAAAGCAGTTATTCGAGCTCCGCCTGGGCTGGAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAGAAGATGTCGTTCACTGTGAGGGTTAGAGCAAACAGTGGTGGGAATATTCTTTCTGGTAGCTTAAGCTGGGAGGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTGCATTTGGTATTCCATCATGA | 2037 | 48.06 | MISVMHQNLWCIATTGASTALQPGSTRRRLENSPVEMDEVVSVFPSEKKQLHTTRSWDFMGFFQQARRSSLESDLVIGMLDTGIWPESESFSDEGLGPPPPKWKGGCQPASNFTCNNKIIGARFFRSEPLGEGDILSPRDTEGHGTHTASTAGGNLVSGASLFGLGLGTARGGTPSARIAVYKICWSDGCFDADILAAFDNAIADGVDIISLSVGGFIAKDYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESSQGISVNTFQLGDKLIPLIYAGDAPNTTAGFNESLSRFCFPGSLDVNQVEGKIVLCDEIGDGEAALSSGAVGTIMQDGGLQDAAFLFPLPASVLDLNAGNNVFQYLRSTSNPEATIEKSTTIEDLSAPSVVSFSSRGPNLITLDILKPDLAAPGVDIVASWSEGTTIGGLEGDNRVSPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMAPKLNTDAEFAYGAGHINPANAINPGLVYDAEEIDYIKFLCGQGYSTQNLRLVTGDESNCSDVAKTAASDLNYPSFSLLMKSQKLNTRVYHRTVTNVGVPVSTYKAVIRAPPGLEVTVRPATLSFRSLGQKMSFTVRVRANSGGNILSGSLSWEDGVHLVRSPIVAFGIPS | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5907534 | 5910478 | - | CmaCh04G011560.1 | Cma04g01156 | 292237 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01156 | 678 | Pfam | Fibronectin type-III domain | 577 | 672 | IPR041469 | - | |
Cma04g01156 | 678 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 56 | 530 | - | - | |
Cma04g01156 | 678 | PANTHER | PUTATIVE-RELATED | 37 | 675 | - | - | |
Cma04g01156 | 678 | Pfam | Subtilase family | 73 | 522 | IPR000209 | GO:0006508|GO:0008236 | |
Cma04g01156 | 678 | SUPERFAMILY | Subtilisin-like | 56 | 531 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g01156 | 678 | Gene3D | - | 547 | 674 | - | - | |
Cma04g01156 | 678 | Gene3D | Peptidase S8/S53 domain | 74 | 543 | IPR036852 | GO:0004252|GO:0006508 | |
Cma04g01156 | 678 | Gene3D | - | 271 | 408 | - | - | |
Cma04g01156 | 678 | CDD | Peptidases_S8_3 | 49 | 504 | IPR034197 | - | |
Cma04g01156 | 678 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 469 | 479 | IPR023828 | - | |
Cma04g01156 | 678 | PRINTS | Subtilisin serine protease family (S8) signature | 72 | 91 | IPR015500 | - | |
Cma04g01156 | 678 | PRINTS | Subtilisin serine protease family (S8) signature | 140 | 153 | IPR015500 | - | |
Cma04g01156 | 678 | PRINTS | Subtilisin serine protease family (S8) signature | 468 | 484 | IPR015500 | - | |
Cma04g01156 | 678 | CDD | PA_subtilisin_like | 277 | 401 | - | - | |
Cma04g01156 | 678 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 37 | 675 | IPR045051 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01156 | Cma04g00184 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00994 | Cma-Chr4:5129626 | Cma04g01156 | Cma-Chr4:5907534 | 0 | dispersed | |
Cma04g01156 | Cma-Chr4:5907534 | Cma15g01114 | Cma-Chr15:7075498 | 0 | dispersed | |
Cma07g00861 | Cma-Chr7:4014311 | Cma04g01156 | Cma-Chr4:5907534 | 0 | dispersed | |
Cma04g01156 | Cma-Chr4:5907534 | Cma04g01157 | Cma-Chr4:5916508 | 0 | tandem | |
Cma04g00183 | Cma-Chr4:886209 | Cma04g01156 | Cma-Chr4:5907534 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01156 | - | - | cmos:111458206 | 1228.77 |