Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01197 | ATGAAGAGCCTTGTAGGGTTTTTGCATCCCTCAAAGTCAAAGCCATATTTGGGAGTGGTTTTTGTGCAGCTTGGCTATGCTGGAATGACCATTCTTGCTAAGACAGCATTGGACAAAGGGATGAGCCAATATGTTTTTGTGGCTTATCGTCAAATTGTTGCTACCCTTGTCTTTGCTCCTTTTGCTATCATCTTTGACAGGAAAGTGAGGACAAAAATGACGTTTTCGTTGTTCTTCAAAATTGTGATGCTCGGTTTATTAGAGCCGGTAGTGGATCAGAACTTGTTCTATGCTGGTATGAAGCTCACAACAGCAACCTTTGCAGCTGCGTTGTGCAATGTTCTTCCAGCTTTTGCGTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTAAACATTTTGAAAAGGGGAAGCCAAGCAAAAATCAAAGGAACCATAGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAACAGGACCCATGTTGAATCTACCATGGACAAAGCCATACCACCCCTCTGCTTCTTCTTCTCCTTCAGCTGATTCTACAAATCACCAAAGCCCAATCAAGGGCTCCCTCATGATTGCCATTGGCTGCATTAGCTGGTCAGCCTTCATCATTCTTCAAGCAATTACATTGAAATGGTACCCGGCCGAGCTGTCGCTTACAGCATTGATATGCTTGGTGGGCAGCATTGGCGACACAGGGGTGGCTTTGGTGATGGAGAGGGGGAGCCCTTCTGCTTGGGCTTTGCACTTAGACACACAGCTTCTGGCTGTGGTTTATGGTGGAGTAATGTGCTCAGGAATAGCTTATTACATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTGTGAGTGCATTCAATCCTCTGAGCTTGATTCTTGTAGCAATCATGAGCTCCTTCATCTTGTCTGAGAACATGATTATTGGAGCAGTGGCCATAATCATTGGGCTGTACATGGTTTTGTGGGGCAAAGCCAAAGATCAGCCTTCAGCTAACATGACATCTTGTGAGCAACAAATGGGTGGATCAAGTCAAGAGTTCGTGGGGATTGATGTTGGCAAAGAGGGAAGTAATTGA | 1092 | 45.24 | MKSLVGFLHPSKSKPYLGVVFVQLGYAGMTILAKTALDKGMSQYVFVAYRQIVATLVFAPFAIIFDRKVRTKMTFSLFFKIVMLGLLEPVVDQNLFYAGMKLTTATFAAALCNVLPAFAFLMAWACRLEKVNILKRGSQAKIKGTIVTVGGAMIMTFITGPMLNLPWTKPYHPSASSSPSADSTNHQSPIKGSLMIAIGCISWSAFIILQAITLKWYPAELSLTALICLVGSIGDTGVALVMERGSPSAWALHLDTQLLAVVYGGVMCSGIAYYIQGVVMQTKGPVFVSAFNPLSLILVAIMSSFILSENMIIGAVAIIIGLYMVLWGKAKDQPSANMTSCEQQMGGSSQEFVGIDVGKEGSN | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6104958 | 6107409 | + | CmaCh04G011970.1 | Cma04g01197 | 292278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01197 | 363 | PANTHER | WAT1-RELATED PROTEIN | 11 | 339 | - | - | |
Cma04g01197 | 363 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 49 | 153 | - | - | |
Cma04g01197 | 363 | Pfam | EamA-like transporter family | 191 | 326 | IPR000620 | GO:0016020|GO:0016021 | |
Cma04g01197 | 363 | Pfam | EamA-like transporter family | 16 | 134 | IPR000620 | GO:0016020|GO:0016021 | |
Cma04g01197 | 363 | PANTHER | WAT1-RELATED PROTEIN | 11 | 339 | IPR030184 | GO:0016021|GO:0022857 | |
Cma04g01197 | 363 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 252 | 331 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01197 | Cma-Chr4:6104958 | Cma04g01783 | Cma-Chr4:8994980 | 0 | dispersed | |
Cma04g01197 | Cma-Chr4:6104958 | Cma04g01198 | Cma-Chr4:6111240 | 0 | tandem | |
Cma15g00409 | Cma-Chr15:1834809 | Cma04g01197 | Cma-Chr4:6104958 | 7.24E-123 | wgd | |
Cma03g00442 | Cma-Chr3:4615905 | Cma04g01197 | Cma-Chr4:6104958 | 3.82E-137 | wgd | |
Cma04g00224 | Cma-Chr4:1085071 | Cma04g01197 | Cma-Chr4:6104958 | 2.79E-166 | wgd | |
Cma04g01197 | Cma-Chr4:6104958 | Cma07g00964 | Cma-Chr7:4659149 | 1.18E-136 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01197 | - | - | cmos:111458151 | 521.546 |