Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01211 ATGGCCATTGAGGTTGTTGTCAAGGCTGCTACTGGTGCCCCCGATGTTCTTGGAGACTGCCCTTTCTGCCACAGGGTTCTTTTAACTTTAGAGGAGAAGAAAGTTGCTTATAAATTGCTTCTTGTCAATCTCTCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTTGTGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGACCCTTCTCTTGTTACTCCTCCTCAATTTTCTTCTGTGGGATCAAAGATAAACGGTGCTTTTGTAAAATTCTTGTTGAGCAAGGACCCCACTGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGGGAAAAAGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATATTGATATTGAAAAAGTAACTGCTGTTGATTTGAGTCTGGCACCAAAATTGTACCATATTGATATTGCTCTTGGCCATTTCAAGAAGTGGGTTTTCCCCGAAAACTTATCGAGTTTATCCGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGTCCCAGAACATGTAATTGCTGGTTGGGAGACCAAGGTGAATGCTGCTTGA 699 44.21 MAIEVVVKAATGAPDVLGDCPFCHRVLLTLEEKKVAYKLLLVNLSDKPSWFLEVSPEGKVPVVKFDGKWVPDSDVIVGILEEKYPDPSLVTPPQFSSVGSKINGAFVKFLLSKDPTDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHIDIEKVTAVDLSLAPKLYHIDIALGHFKKWVFPENLSSLSAYKKLLFARESFVKTKAVPEHVIAGWETKVNAA 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6178882 6181613 - CmaCh04G012110.1 Cma04g01211 292292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01211 232 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 162 - -
Cma04g01211 232 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 163 230 - -
Cma04g01211 232 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 162 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cma04g01211 232 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 163 230 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cma04g01211 232 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Cma04g01211 232 SFLD Main (cytGST) 19 163 - -
Cma04g01211 232 Gene3D - 90 161 - -
Cma04g01211 232 Gene3D - 162 231 - -
Cma04g01211 232 CDD GST_N_family 20 77 - -
Cma04g01211 232 SUPERFAMILY GST C-terminal domain-like 164 228 IPR036282 -
Cma04g01211 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cma04g01211 232 Gene3D Glutaredoxin 1 89 - -
Cma04g01211 232 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cma04g01211 232 SUPERFAMILY GST C-terminal domain-like 99 162 IPR036282 -
Cma04g01211 232 SFLD Glutathione Transferase (cytosolic) 19 163 IPR040079 -
Cma04g01211 232 Pfam Glutathione S-transferase, C-terminal domain 119 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00237 Cma-Chr4:1157423 Cma04g01211 Cma-Chr4:6178882 1.61E-97 dispersed
Cma04g01211 Cma-Chr4:6178882 Cma14g00821 Cma-Chr14:4147107 2.08E-82 dispersed
Cma04g00236 Cma-Chr4:1154973 Cma04g01211 Cma-Chr4:6178882 3.66E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01211 K21888 - cmax:111483829 364.385