Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01359 ATGGCTGATTGTGGAACAGAGCAGCGTACTTTGGAAGATACTTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCACCTCACTGGAAAGTGGCTGGAGAAAAAGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTGACGATAGGCCAAGATGCTGTCACTCAAATTTGCGTTTCAAAGGAGCTTGCGGCAACTTGGCTTCCCTGTGCAGCAAGAGGTAAGGAAGGAGCAAAAGTTACCAAGAACAGTCGTCTTAAACTCCTTGAATTTTTAGATCCTGACTATGGTTCAAGGCGTATTTTAGCTTCAAAAGGAGACGATGCATGTGCCAAGAAGGGCCAACTCGCTTTTGTGTCGGCATATGGAATTCACCAGCTCCATATTTTCATCTTTGTATTGGCTGTCTTCCATATTCTATACTGCATCACCATTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACGAAGACCATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCGAGAGATACCACGTTTGGACGCCGACACTTGAGCTTTTGGAGTCGTACACCAATTTCCCTCTGGATTGTTTGTTTCTTCAGACAATTCTTTAGATCAGTTACCAAGGTTGATTACATGACACTGAGACATGGATTCATCGTTGCACATTTGCCACCTGGAAGTGAAGTAAAATTTGATTTTCACAAATACATTAGCAGATCTCTCGAAGATGACTTCAAAGTTGTCGTGGGGATTAGTCCAGCGATGTGGATATTTGCTGTTTTCTTAATCCTAACCAACACAAATGGGTGGTATTCGTATCTATGGATGCCTTTCATCTCCTTAATTATAATTCTATTGGTCGGAACGAAGCTACAAGTTATCATAACCGAGATGGGACTGACAATTCAAGAAAGGGGCCATGTTGTGAAGGGTGTTCCCACCGTTCAGCCCCGGGATGACCTCTTTTGGTTCAGACGCCCGCAACTTATTCTCTTCCTGATTCACTTCGTTCTCTTTACGAATGCTTTTCAGCTTGCCTTCTTTGCTTGGACCTCATACGCATTTAAGTGGAGAGCTTGCTTCCATAAGCGAGTTGAAGATATTGTCATCAGGCTCTTAATGGGGGTTATCATTCATGTTCTATGCAGTTATGGGACACTCCCACTCTATGCATTGGTGACCCAGATGGGCAGCAACATGAGACCAACCATTTTCAACGACCGAGTGGCGTCGGCGTTGAAGAACTGGCACCACAATGCCAAGAAGAACACGAAGCACCCGCACAACCCGGATAGTACCTCGCCTTTCTCAAGCAGGCCGACTACTCCAACACACGGCATGTCTCCCATTCACCTTCTGCACAAACAGCAGCAAAGCAGCACATCTCCCAGGCTATCCGATGGCGAACCGGATCGTTGGGACATTGAAGAGATGCCTCCTTCACACCATAGTAGCAGAGCCCATGATCATCAAGAACTCGAACATTCTGTGACGAATAGAGAACAGGAGATGACAGTTAAACAGCAGAGTTCATCGGAGACCGGTTCCACAACACGTCCTGCTCGTGCTCAACACGAAATCACCAAAAGCCCCTCAGACTTCTCATTTGCCAAATGA 1716 45.05 MADCGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKKHKPALVEALEKVKAELMLLGFISLLLTIGQDAVTQICVSKELAATWLPCAARGKEGAKVTKNSRLKLLEFLDPDYGSRRILASKGDDACAKKGQLAFVSAYGIHQLHIFIFVLAVFHILYCITILALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPISLWIVCFFRQFFRSVTKVDYMTLRHGFIVAHLPPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWIFAVFLILTNTNGWYSYLWMPFISLIIILLVGTKLQVIITEMGLTIQERGHVVKGVPTVQPRDDLFWFRRPQLILFLIHFVLFTNAFQLAFFAWTSYAFKWRACFHKRVEDIVIRLLMGVIIHVLCSYGTLPLYALVTQMGSNMRPTIFNDRVASALKNWHHNAKKNTKHPHNPDSTSPFSSRPTTPTHGMSPIHLLHKQQQSSTSPRLSDGEPDRWDIEEMPPSHHSSRAHDHQELEHSVTNREQEMTVKQQSSSETGSTTRPARAQHEITKSPSDFSFAK 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6946409 6951198 + CmaCh04G013590.1 Cma04g01359 292440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01359 571 MobiDBLite consensus disorder prediction 535 571 - -
Cma04g01359 571 PANTHER MLO-LIKE PROTEIN 1 4 569 IPR004326 GO:0006952|GO:0016021
Cma04g01359 571 Pfam Mlo family 8 489 IPR004326 GO:0006952|GO:0016021
Cma04g01359 571 MobiDBLite consensus disorder prediction 462 499 - -
Cma04g01359 571 MobiDBLite consensus disorder prediction 500 534 - -
Cma04g01359 571 PANTHER MLO-LIKE PROTEIN 4 569 - -
Cma04g01359 571 MobiDBLite consensus disorder prediction 453 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01359 Cma-Chr4:6946409 Cma20g00477 Cma-Chr20:2307515 0 dispersed
Cma18g00888 Cma-Chr18:7659471 Cma04g01359 Cma-Chr4:6946409 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01359 K08472 - csv:101218929 1021.15