Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01419 ATGGCTTCCTTCTTCTCTTCATCCACGTTGTCCCTCATTGCCTTTTGCCTCTCCGGTTTAATCTTCTTCCTCTCCAGAAAACCAAAATCAAACCGTCTCAAACTCCCCCCCGGTCCGCCCGGTTGGCCCCTCGTCGGCAACCTATTCCAAGTCGCCCGGTCCAGAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATCTACGGCCCAATTTTTACGCTTAAAATGGGAACAAGAACAATGGTTGTATTGAGCGATGCGAATCTCGTTCACGAGGCTCTAATTAAAAAGGGGGCAGTTTTTGCTGATCGGCCCAGAGAAAATCCTACCCGGACAATATTCAGCAGCAACAAATTTTCCGTCAATGCGGCGGTTTACGGCCCTATATGGCGGTCCCTCCGCCGCAACATGGTGGAGAATATGCTCAGTCCCGGAAAAGTAAAGGAGTTTCGTGGAGTGAGGGAAAAGGCAATGGAAAAATTCATGAAACGGTTACGAGACGAAGCAGAGGCCAATAACGGCGTCGTTTTGGTGTCGAAAAACGCGCGTTTTGCGGTGTTTTGTATTCTGTTAACAATGTGTTTCGGAATCGAGATGGAAGAAGAAGCGGTGGTGAAAATGGACGAGATTCTCAAATCCGTATTGATCACTCTGGAGCCAAGAATCGACGATTATCTCCCGATTTTAACCCCGTTTTTTTCAAAAGAAAAAAATCGAGCGCATTTCGTTCGAAAACAACAAGTTCAATTCGTCGTTGGGTTAATTAATCGGCGGCGGCGAGCGCTGGAAAATCCGGCGTCCGACGGCGCTGCGACGTCGTTTTCATACCTCGACACGCTTTTCGATTTGAAATTTGATTCCAATGGAGGCAGAGCAGCGGCGACGGATGAGGAATTGGTGACACTCTGTTCGGAGTTTTTGAATGGCGGAACCGACACGACGGCGACGGCGATAGAATGGGGGATGGCGGAATTGATAGAGAATCCGGGAGTTCAGAGGAAGGTTCTAGAAGAAATTAGAGCGACGGTTGGTGAGAAAAAAGTTGAAGAAAATGATTTAGAGAAAATGGTTTATTTACAATCGGTTGTGAAAGAAGTTCTGCGGAAACATCCTCCGACGTTCTTTACTCTGACGCACTCCGTGACGGCGCCGGCGAAACTGGGAGGATACGACATCCCAAAGGACACCAACGTCGAATTCTTCTTGCCGGCCATCGGAAAGGATCCGAAGCTGTGGAAGAATCCGGAGAAGTTCGAACCGGAAAGATTTTCCTCCGGCGAGGAAGAAGCCGATATAACCGGCGTCACTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGGCGGATCTGTCCCGGCTTGGGAATGGGCACCATCCACATTCACTTAATGCTTGCTAGAATGCTTCAGGAGTTTGAATGGACCGCCTATCCGGCGGCGAGCTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTACGGGCTACCATTAAACCCAGGGTTTAA 1524 49.41 MASFFSSSTLSLIAFCLSGLIFFLSRKPKSNRLKLPPGPPGWPLVGNLFQVARSRKPFFEYIEDQRRIYGPIFTLKMGTRTMVVLSDANLVHEALIKKGAVFADRPRENPTRTIFSSNKFSVNAAVYGPIWRSLRRNMVENMLSPGKVKEFRGVREKAMEKFMKRLRDEAEANNGVVLVSKNARFAVFCILLTMCFGIEMEEEAVVKMDEILKSVLITLEPRIDDYLPILTPFFSKEKNRAHFVRKQQVQFVVGLINRRRRALENPASDGAATSFSYLDTLFDLKFDSNGGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGVQRKVLEEIRATVGEKKVEENDLEKMVYLQSVVKEVLRKHPPTFFTLTHSVTAPAKLGGYDIPKDTNVEFFLPAIGKDPKLWKNPEKFEPERFSSGEEEADITGVTGVRMMPFGVGRRICPGLGMGTIHIHLMLARMLQEFEWTAYPAASSVDFSWKMEFTVVMKNPLRATIKPRV 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7255537 7257060 + CmaCh04G014190.1 Cma04g01419 292500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01419 507 PANTHER CYTOCHROME P450 77A4 8 506 - -
Cma04g01419 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cma04g01419 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01419 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 506 - -
Cma04g01419 507 Gene3D Cytochrome P450 28 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00529 Cma-Chr3:5036277 Cma04g01419 Cma-Chr4:7255537 2.36E-145 dispersed
Cma04g01419 Cma-Chr4:7255537 Cma20g00927 Cma-Chr20:4543054 3.28E-117 dispersed
Cma15g00480 Cma-Chr15:2150183 Cma04g01419 Cma-Chr4:7255537 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01419 K21995 - csv:101217068 825.469