Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01443 ATGGAAAAGGGTCAAGGCAAGTCTAGAAGACTTTGTCTGCCATCAAATTTGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTACAGTGATCTCGGAGAACTCAGGGGAGCTGAGGAAGACGGAGAGAAGCCGACGATGGGGGTGCCTGCAACTTTGGGTGATGATTTTCTGAGAGAAAGAGCGGCGAAGATGAGAGAATCACTGCAGAAGAGCCAAACTATTACTGATAACGTCGTCTCCATTCTCGGCTCCTTTGATCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGACAAGACTTTGAAGTCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAGACGAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCAATTGGTCTATTAAGAAACAATATCAAATTCTTTAGCGGCCATAAAGGTTTTAAGGGCAACGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAGGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCGTACAGCAAACCTGTGGAGCCTGAACGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGGAAAGAATCCCTCCTCAAATCATCATTCTGCACATCATGATAATAACTTAGAGAATGCTGTCTACACACCTCCCACTCTCATACCACCACGTGTTCTGCCACTGTTGCACGAATTATCACTGCAAATGGTTCAAGCCGGTCATCAACAACAAATTTTAAAAGTCTACAGGGATACCCGTTCAGTCGTTATGGAAGAAAGCTTACGGAAATTGGGAGTTGAAAAACTTAGCAAAGAAGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGTTGTTTGCTGGAGAACGAAAAGTTTGTGATCAAATATTTGAAGGCCTTGAATCGCTTAAAGATCAATCATTTGCTGAGGTTACAGGTAGTAGTGTGTCTGTGCTATTTAGTTTCGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGATATGTATGAAATAATGCGAGAGCTTCACTCCGAGATTGAGACAATTTTCAAGGGTAAAGCGTGCAGTGAGATCAAGGAATCTGCATCGGGATTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTAGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCAGTGTTAGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTATTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAGGAGAGTGGTCAAACGAGTTCAGAACTGGCCACTGTCACAATGCAAATTATGCAGGCTCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACCTATTCCTCATGAACAATATTCACTATATAGTTAGATCTGTTCGCAGATCCGAAGCCAAGGATTTGCTCGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAGCAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTTTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCCGGCGGTGGCAGCGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTTAAGACGTTCAATATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACTGAGCTGCGGGAGTCCCTACGACTTTCGGTTGCTGAAGTCTTACTTCCTGCATACCGATCCTTCCTAAAACGTTTTGGGCCACTAGTTGATGTTGGAAAGAATCCCCAAAAATATGTCAGGTACCAGCCAGAAGATCTCGAAAGGATGCTCGGAGAGTTTTTCGAGGGGAAGAACTTGAGCGAACCTAAGCGACCAACTCAAAATGAAGTCGTGGAGCTTCTTCAGGATTCTGGTTCTGCTTCGCTGCGGAGAAAATTGGAGCATTCTCGAAGAACCACACTCGCTCCGGATTCGTTGCTGTTCCTAAAAATGCCGGGAGATGGTGAAATCACAGAGGATCCAATCATTGAAGCGAGCAGCAAGGAGGCATGCGATTCGAAAGCGACGAAGCGGTTTGCCGATGATATCATGCCTCATATTCTCAATCTTTATGGATCTTCTGCAACGCCTAGGGATTTCGAAATCTACGCTGCCGATGCTTCATTCGAGGATCCACTGACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAGTGTCAAAGAGAAACTTATTTCCCCTGGAAAACACGAGATTACAGTCGATAATAAGCAACACTACAAGTTTCTGGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTCTTGAAGGAAAAGTAATTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAATAGAGAAACAGTGAAGTTACCAATGGTTGGTCGAGTTTTGGAAATGACTCGTAGATGTGCGATGTTAGCAACTCATGCAATGATGAGATTTGGCAAGGATTGA 2757 43.31 MEKGQGKSRRLCLPSNLILSLSLSLSLCYSDLGELRGAEEDGEKPTMGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGLLRNNIKFFSGHKGFKGNEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGGKNPSSNHHSAHHDNNLENAVYTPPTLIPPRVLPLLHELSLQMVQAGHQQQILKVYRDTRSVVMEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGLESLKDQSFAEVTGSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACSEIKESASGLTKRLAQTAKDTFSDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEESGQTSSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDVGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKRPTQNEVVELLQDSGSASLRRKLEHSRRTTLAPDSLLFLKMPGDGEITEDPIIEASSKEACDSKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKVIRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7345848 7356111 - CmaCh04G014430.1 Cma04g01443 292524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01443 918 Pfam Exo70 exocyst complex subunit 325 684 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma04g01443 918 SUPERFAMILY NTF2-like 768 884 IPR032710 -
Cma04g01443 918 Coils Coil 176 196 - -
Cma04g01443 918 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 693 IPR004140 GO:0000145|GO:0006887
Cma04g01443 918 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 82 693 - -
Cma04g01443 918 SUPERFAMILY Cullin repeat-like 124 688 IPR016159 -
Cma04g01443 918 Gene3D Exocyst complex component Exo70 122 697 - -
Cma04g01443 918 MobiDBLite consensus disorder prediction 217 236 - -
Cma04g01443 918 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01120 Cma-Chr3:7621957 Cma04g01443 Cma-Chr4:7345848 0 dispersed
Cma04g01443 Cma-Chr4:7345848 Cma07g00826 Cma-Chr7:3822878 0 dispersed
Cma12g00298 Cma-Chr12:1525123 Cma04g01443 Cma-Chr4:7345848 3.61E-65 dispersed
Cma17g00639 Cma-Chr17:5408234 Cma04g01443 Cma-Chr4:7345848 6.75E-56 dispersed
Cma18g00955 Cma-Chr18:8137003 Cma04g01443 Cma-Chr4:7345848 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01443 K07195 - csv:101206262 1204.5